#=GENOME_DIFF	1.0
#=AUTHOR	
SNP	1496	311	REL606	1615	G	aa_new_seq=S	aa_position=427	aa_ref_seq=I	codon_new_seq=AGT	codon_position=2	codon_ref_seq=ATT	gene_list=thrA	gene_name=thrA	gene_position=1280	gene_product=bifunctional aspartokinase I/homeserine dehydrogenase I	gene_strand=>	locus_tag=ECB_00002	snp_type=nonsynonymous
SNP	1497	312	REL606	10269	C	aa_new_seq=C	aa_position=75	aa_ref_seq=F	codon_new_seq=TGC	codon_position=2	codon_ref_seq=TTC	gene_list=yaaH	gene_name=yaaH	gene_position=224	gene_product=conserved inner membrane protein associated with acetate transport	gene_strand=<	locus_tag=ECB_00010	snp_type=nonsynonymous
MOB	1488	9,8	REL606	16972	IS150	-1	3	gene_name=mokC/nhaA	gene_position=intergenic (-14/-514)	gene_product=regulatory protein for HokC, overlaps CDS of hokC/pH-dependent sodium/proton antiporter	locus_tag=ECB_00017/ECB_00018	snp_type=intergenic
SNP	1498	314	REL606	21936	G	gene_name=ECB_00021/ECB_00022	gene_position=intergenic (-161/+272)	gene_product=putative usher protein/conserved hypothetical protein	locus_tag=ECB_00021/ECB_00022	snp_type=intergenic
SNP	1499	316	REL606	35850	C	aa_new_seq=N	aa_position=321	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=carB	gene_name=carB	gene_position=963	gene_product=carbamoyl-phosphate synthase large subunit	gene_strand=>	locus_tag=ECB_00037	snp_type=nonsynonymous
SNP	1500	317	REL606	44151	G	aa_new_seq=S	aa_position=143	aa_ref_seq=R	codon_new_seq=AGC	codon_position=3	codon_ref_seq=AGA	gene_list=caiA	gene_name=caiA	gene_position=429	gene_product=crotonobetaine reductase subunit II, FAD-binding	gene_strand=<	locus_tag=ECB_00043	snp_type=nonsynonymous
SNP	1501	318	REL606	44865	C	aa_new_seq=V	aa_position=420	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=caiT	gene_name=caiT	gene_position=1260	gene_product=L-carnitine/gamma-butyrobetaine antiporter	gene_strand=<	locus_tag=ECB_00044	snp_type=synonymous
SNP	1502	319	REL606	46353	C	gene_name=caiT/fixA	gene_position=intergenic (-229/-245)	gene_product=L-carnitine/gamma-butyrobetaine antiporter/predicted electron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain	locus_tag=ECB_00044/ECB_00045	snp_type=intergenic
SNP	1503	320	REL606	47721	A	aa_new_seq=T	aa_position=113	aa_ref_seq=T	codon_new_seq=ACA	codon_position=3	codon_ref_seq=ACC	gene_list=fixB	gene_name=fixB	gene_position=339	gene_product=predicted electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like	gene_strand=>	locus_tag=ECB_00046	snp_type=synonymous
SNP	1504	323	REL606	94003	T	aa_new_seq=T	aa_position=56	aa_ref_seq=T	codon_new_seq=ACT	codon_position=3	codon_ref_seq=ACG	gene_list=ftsL	gene_name=ftsL	gene_position=168	gene_product=membrane bound cell division protein at septum containing leucine zipper motif	gene_strand=>	locus_tag=ECB_00084	snp_type=synonymous
SNP	1505	324	REL606	98071	G	aa_new_seq=L	aa_position=206	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=murF	gene_name=murF	gene_position=618	gene_product=UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase	gene_strand=>	locus_tag=ECB_00087	snp_type=nonsynonymous
SNP	1506	325	REL606	100218	C	aa_new_seq=L	aa_position=110	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=murD	gene_name=murD	gene_position=328	gene_product=UDP-N-acetylmuramoyl-L-alanyl-D- glutamatesynthetase	gene_strand=>	locus_tag=ECB_00089	snp_type=nonsynonymous
INS	1507	326	REL606	114034	C	gene_list=mutT	gene_name=mutT	gene_position=coding (187/390 nt)	gene_product=nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP	gene_strand=>	locus_tag=ECB_00100
SNP	1508	327	REL606	125265	C	aa_new_seq=Q	aa_position=124	aa_ref_seq=K	codon_new_seq=CAG	codon_position=1	codon_ref_seq=AAG	gene_list=pdhR	gene_name=pdhR	gene_position=370	gene_product=transcriptional regulator of pyruvate dehydrogenase complex	gene_strand=>	locus_tag=ECB_00112	snp_type=nonsynonymous
SNP	1509	328	REL606	125630	G	aa_new_seq=S	aa_position=245	aa_ref_seq=S	codon_new_seq=TCG	codon_position=3	codon_ref_seq=TCT	gene_list=pdhR	gene_name=pdhR	gene_position=735	gene_product=transcriptional regulator of pyruvate dehydrogenase complex	gene_strand=>	locus_tag=ECB_00112	snp_type=synonymous
SNP	1510	329	REL606	136422	C	aa_new_seq=A	aa_position=668	aa_ref_seq=A	codon_new_seq=GCC	codon_position=3	codon_ref_seq=GCA	gene_list=acnB	gene_name=acnB	gene_position=2004	gene_product=aconitate hydratase	gene_strand=>	locus_tag=ECB_00117	snp_type=synonymous
SNP	1511	330	REL606	139321	G	gene_name=speE/yacC	gene_position=intergenic (-54/+52)	gene_product=spermidine synthase/hypothetical protein	locus_tag=ECB_00120/ECB_00121	snp_type=intergenic
SNP	1512	331	REL606	145773	C	aa_new_seq=V	aa_position=64	aa_ref_seq=V	codon_new_seq=GTC	codon_position=3	codon_ref_seq=GTA	gene_list=yadG	gene_name=yadG	gene_position=192	gene_product=predicted transporter subunit: ATP-binding component of ABC superfamily	gene_strand=>	locus_tag=ECB_00126	snp_type=synonymous
SNP	1513	332	REL606	154388	C	aa_new_seq=R	aa_position=18	aa_ref_seq=L	codon_new_seq=CGA	codon_position=2	codon_ref_seq=CTA	gene_list=yadK	gene_name=yadK	gene_position=53	gene_product=predicted fimbrial-like adhesin protein	gene_strand=<	locus_tag=ECB_00135	snp_type=nonsynonymous
SNP	1514	333	REL606	156770	C	aa_new_seq=A	aa_position=501	aa_ref_seq=S	codon_new_seq=GCG	codon_position=1	codon_ref_seq=TCG	gene_list=htrE	gene_name=htrE	gene_position=1501	gene_product=predicted outer membrane usher protein	gene_strand=<	locus_tag=ECB_00138	snp_type=nonsynonymous
SNP	1515	334	REL606	161041	G	aa_new_seq=H	aa_position=302	aa_ref_seq=N	codon_new_seq=CAC	codon_position=1	codon_ref_seq=AAC	gene_list=pcnB	gene_name=pcnB	gene_position=904	gene_product=poly(A) polymerase I	gene_strand=<	locus_tag=ECB_00142	snp_type=nonsynonymous
SNP	1516	335	REL606	179508	G	aa_new_seq=V	aa_position=19	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=yadR	gene_name=yadR	gene_position=57	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_00155	snp_type=synonymous
SNP	1517	336	REL606	181491	G	aa_new_seq=L	aa_position=169	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=pfs	gene_name=pfs	gene_position=505	gene_product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	gene_strand=<	locus_tag=ECB_00158	snp_type=nonsynonymous
SNP	1518	337	REL606	212537	G	aa_new_seq=S	aa_position=6	aa_ref_seq=I	codon_new_seq=AGT	codon_position=2	codon_ref_seq=ATT	gene_list=ldcC	gene_name=ldcC	gene_position=17	gene_product=lysine decarboxylase 2, constitutive	gene_strand=>	locus_tag=ECB_00184	snp_type=nonsynonymous
SNP	1519	338	REL606	214405	C	aa_new_seq=Q	aa_position=629	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=ldcC	gene_name=ldcC	gene_position=1885	gene_product=lysine decarboxylase 2, constitutive	gene_strand=>	locus_tag=ECB_00184	snp_type=nonsynonymous
SNP	1520	339	REL606	226275	C	gene_name=gmhB/rrsH	gene_position=intergenic (+30/-334)	gene_product=hypothetical protein/16S ribosomal RNA	locus_tag=ECB_00199/ECB_r00001	snp_type=intergenic
SNP	1521	346	REL606	235495	G	gene_name=yafE/mltD	gene_position=intergenic (+22/+26)	gene_product=predicted S-adenosyl-L-methionine-dependent methyltransferase/predicted membrane-bound lytic murein transglycosylase D	locus_tag=ECB_00203/ECB_00204	snp_type=intergenic
SNP	1522	353	REL606	243156	C	aa_new_seq=P	aa_position=115	aa_ref_seq=H	codon_new_seq=CCT	codon_position=2	codon_ref_seq=CAT	gene_list=yhhI	gene_name=yhhI	gene_position=344	gene_product=predicted transposase	gene_strand=>	locus_tag=ECB_00213	snp_type=nonsynonymous
SNP	1523	358	REL606	253813	C	gene_list=fhiA	gene_name=fhiA	gene_position=pseudogene (818/1710 nt)	gene_product=b0229; flagellar system protein	gene_strand=<	locus_tag=ECB_00224	snp_type=pseudogene
SNP	1524	360	REL606	289049	A	aa_new_seq=W	aa_position=246	aa_ref_seq=G	codon_new_seq=TGG	codon_position=1	codon_ref_seq=GGG	gene_list=ykgA	gene_name=ykgA	gene_position=736	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=<	locus_tag=ECB_00257	snp_type=nonsynonymous
SNP	1525	361	REL606	295469	G	aa_new_seq=E	aa_position=161	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=ykgF	gene_name=ykgF	gene_position=483	gene_product=predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain	gene_strand=>	locus_tag=ECB_00263	snp_type=nonsynonymous
SNP	1526	362	REL606	298983	G	aa_new_seq=P	aa_position=305	aa_ref_seq=Q	codon_new_seq=CCA	codon_position=2	codon_ref_seq=CAA	gene_list=betA	gene_name=betA	gene_position=914	gene_product=choline dehydrogenase	gene_strand=<	locus_tag=ECB_00267	snp_type=nonsynonymous
SNP	1527	363	REL606	301762	C	aa_new_seq=K	aa_position=74	aa_ref_seq=N	codon_new_seq=AAG	codon_position=3	codon_ref_seq=AAT	gene_list=betI	gene_name=betI	gene_position=222	gene_product=transcriptional regulator BetI	gene_strand=<	locus_tag=ECB_00269	snp_type=nonsynonymous
SNP	1528	366	REL606	314518	C	aa_new_seq=R	aa_position=249	aa_ref_seq=S	codon_new_seq=CGT	codon_position=1	codon_ref_seq=AGT	gene_list=yahJ	gene_name=yahJ	gene_position=745	gene_product=deaminase	gene_strand=>	locus_tag=ECB_00279	snp_type=nonsynonymous
SNP	1529	367	REL606	315566	C	aa_new_seq=Q	aa_position=12	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=yahK	gene_name=yahK	gene_position=34	gene_product=predicted oxidoreductase, Zn-dependent and NAD(P)-binding	gene_strand=>	locus_tag=ECB_00280	snp_type=nonsynonymous
SNP	1530	372	REL606	325864	C	aa_new_seq=T	aa_position=170	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=prpE	gene_name=prpE	gene_position=509	gene_product=predicted propionyl-CoA synthetase with ATPase domain	gene_strand=>	locus_tag=ECB_00289	snp_type=nonsynonymous
SNP	1531	375	REL606	330492	G	aa_new_seq=T	aa_position=252	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=cynR	gene_name=cynR	gene_position=755	gene_product=DNA-binding transcriptional dual regulator	gene_strand=<	locus_tag=ECB_00292	snp_type=nonsynonymous
SNP	1532	376	REL606	331559	G	aa_new_seq=A	aa_position=69	aa_ref_seq=S	codon_new_seq=GCC	codon_position=1	codon_ref_seq=TCC	gene_list=cynT	gene_name=cynT	gene_position=205	gene_product=carbonic anhydrase	gene_strand=>	locus_tag=ECB_00293	snp_type=nonsynonymous
SNP	1533	377	REL606	332612	G	aa_new_seq=R	aa_position=22	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=cynX	gene_name=cynX	gene_position=65	gene_product=predicted cyanate transporter	gene_strand=>	locus_tag=ECB_00295	snp_type=nonsynonymous
SNP	1534	378	REL606	332980	G	aa_new_seq=G	aa_position=145	aa_ref_seq=W	codon_new_seq=GGG	codon_position=1	codon_ref_seq=TGG	gene_list=cynX	gene_name=cynX	gene_position=433	gene_product=predicted cyanate transporter	gene_strand=>	locus_tag=ECB_00295	snp_type=nonsynonymous
SNP	1535	379	REL606	342446	C	aa_new_seq=A	aa_position=427	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=mhpA	gene_name=mhpA	gene_position=1280	gene_product=3-(3-hydroxyphenyl)propionate hydroxylase	gene_strand=>	locus_tag=ECB_00301	snp_type=nonsynonymous
SNP	1536	380	REL606	344430	G	aa_new_seq=A	aa_position=217	aa_ref_seq=A	codon_new_seq=GCG	codon_position=3	codon_ref_seq=GCT	gene_list=mhpC	gene_name=mhpC	gene_position=651	gene_product=2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase	gene_strand=>	locus_tag=ECB_00303	snp_type=synonymous
SNP	1537	382	REL606	375815	T	gene_name=aroM/yaiE	gene_position=intergenic (+64/-8)	gene_product=hypothetical protein/hypothetical protein	locus_tag=ECB_00337/ECB_00338	snp_type=intergenic
SNP	1538	389	REL606	379334	G	aa_new_seq=K	aa_position=256	aa_ref_seq=N	codon_new_seq=AAG	codon_position=3	codon_ref_seq=AAT	gene_list=yajF	gene_name=yajF	gene_position=768	gene_product=fructokinase	gene_strand=>	locus_tag=ECB_00343	snp_type=nonsynonymous
SNP	1539	390	REL606	380188	C	aa_new_seq=L	aa_position=239	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=araJ	gene_name=araJ	gene_position=717	gene_product=predicted transporter	gene_strand=<	locus_tag=ECB_00344	snp_type=nonsynonymous
SNP	1540	391	REL606	383083	C	aa_new_seq=R	aa_position=365	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=sbcC	gene_name=sbcC	gene_position=1094	gene_product=exonuclease, dsDNA, ATP-dependent	gene_strand=<	locus_tag=ECB_00345	snp_type=nonsynonymous
SNP	1541	392	REL606	393379	T	gene_name=yajB/queA	gene_position=intergenic (-38/-55)	gene_product=putative glycoprotein; b0404_2/S-adenosylmethionine:tRNA ribosyltransferase-isomerase	locus_tag=ECB_00352/ECB_00353	snp_type=intergenic
SNP	1542	393	REL606	398007	G	aa_new_seq=C	aa_position=27	aa_ref_seq=F	codon_new_seq=TGC	codon_position=2	codon_ref_seq=TTC	gene_list=secF	gene_name=secF	gene_position=80	gene_product=protein export protein SecF	gene_strand=>	locus_tag=ECB_00357	snp_type=nonsynonymous
SNP	1543	394	REL606	399655	A	gene_name=yajD/tsx	gene_position=intergenic (+281/+7)	gene_product=hypothetical protein/nucleoside channel, receptor of phage T6 and colicin K	locus_tag=ECB_00358/ECB_00359	snp_type=intergenic
SNP	1544	395	REL606	403444	C	aa_new_seq=L	aa_position=126	aa_ref_seq=M	codon_new_seq=CTC	codon_position=1	codon_ref_seq=ATC	gene_list=ribH	gene_name=ribH	gene_position=376	gene_product=riboflavin synthase subunit beta	gene_strand=>	locus_tag=ECB_00363	snp_type=nonsynonymous
SNP	1545	396	REL606	405910	A	aa_new_seq=R	aa_position=216	aa_ref_seq=R	codon_new_seq=CGT	codon_position=3	codon_ref_seq=CGG	gene_list=yajO	gene_name=yajO	gene_position=648	gene_product=predicted oxidoreductase, NAD(P)-binding	gene_strand=<	locus_tag=ECB_00367	snp_type=synonymous
SNP	1546	397	REL606	411430	G	gene_name=thiI/thiJ	gene_position=intergenic (+11/+43)	gene_product=thiamine biosynthesis protein ThiI/hypothetical protein	locus_tag=ECB_00371/ECB_00372	snp_type=intergenic
SNP	1547	398	REL606	418409	C	gene_name=cyoE/cyoD	gene_position=intergenic (-1/+11)	gene_product=protoheme IX farnesyltransferase/cytochrome o ubiquinol oxidase subunit IV	locus_tag=ECB_00379/ECB_00380	snp_type=intergenic
SNP	1548	399	REL606	424738	G	aa_new_seq=V	aa_position=45	aa_ref_seq=V	codon_new_seq=GTC	codon_position=3	codon_ref_seq=GTA	gene_list=yajG	gene_name=yajG	gene_position=135	gene_product=predicted lipoprotein	gene_strand=<	locus_tag=ECB_00385	snp_type=synonymous
SNP	1549	400	REL606	426998	A	aa_new_seq=L	aa_position=387	aa_ref_seq=F	codon_new_seq=TTA	codon_position=3	codon_ref_seq=TTC	gene_list=tig	gene_name=tig	gene_position=1161	gene_product=trigger factor	gene_strand=>	locus_tag=ECB_00387	snp_type=nonsynonymous
SNP	1550	404	REL606	430835	T	gene_name=insL-2/lon	gene_position=intergenic (-48/-108)	gene_product=putative transposase insL for insertion sequence IS186/DNA-binding ATP-dependent protease La	locus_tag=ECB_00390/ECB_00391	snp_type=intergenic
SNP	1551	405	REL606	436416	G	gene_name=ybaV/ybaW	gene_position=intergenic (+53/-53)	gene_product=hypothetical protein/hypothetical protein	locus_tag=ECB_00394/ECB_00395	snp_type=intergenic
SNP	1552	406	REL606	451789	G	aa_new_seq=S	aa_position=66	aa_ref_seq=F	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TTT	gene_list=maa	gene_name=maa	gene_position=197	gene_product=maltose O-acetyltransferase	gene_strand=<	locus_tag=ECB_00410	snp_type=nonsynonymous
SNP	1553	407	REL606	461180	C	aa_new_seq=L	aa_position=860	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=kefA	gene_name=kefA	gene_position=2578	gene_product=fused conserved protein	gene_strand=>	locus_tag=ECB_00416	snp_type=nonsynonymous
SNP	1554	408	REL606	463771	C	aa_new_seq=A	aa_position=98	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=apt	gene_name=apt	gene_position=293	gene_product=adenine phosphoribosyltransferase	gene_strand=>	locus_tag=ECB_00420	snp_type=nonsynonymous
SNP	1555	409	REL606	471680	G	aa_new_seq=L	aa_position=121	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=aes	gene_name=aes	gene_position=361	gene_product=acetyl esterase	gene_strand=<	locus_tag=ECB_00427	snp_type=nonsynonymous
SNP	1556	410	REL606	473602	G	gene_name=gsk/ybaL	gene_position=intergenic (+106/+27)	gene_product=inosine/guanosine kinase/predicted transporter with NAD(P)-binding Rossmann-fold domain	locus_tag=ECB_00428/ECB_00429	snp_type=intergenic
INS	1557	411	REL606	475292	G	gene_list=ybaL	gene_name=ybaL	gene_position=coding (14/1677 nt)	gene_product=predicted transporter with NAD(P)-binding Rossmann-fold domain	gene_strand=<	locus_tag=ECB_00429
SNP	1558	412	REL606	475904	A	aa_new_seq=V	aa_position=287	aa_ref_seq=G	codon_new_seq=GTG	codon_position=2	codon_ref_seq=GGG	gene_list=fsr	gene_name=fsr	gene_position=860	gene_product=predicted fosmidomycin efflux system	gene_strand=<	locus_tag=ECB_00430	snp_type=nonsynonymous
SNP	1559	414	REL606	492156	A	aa_new_seq=S	aa_position=86	aa_ref_seq=R	codon_new_seq=AGC	codon_position=1	codon_ref_seq=CGC	gene_list=ybbA	gene_name=ybbA	gene_position=256	gene_product=predicted transporter subunit: ATP-binding component of ABC superfamily	gene_strand=>	locus_tag=ECB_00446	snp_type=nonsynonymous
SNP	1560	415	REL606	493795	G	aa_new_seq=L	aa_position=404	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=ybbP	gene_name=ybbP	gene_position=1212	gene_product=predicted inner membrane protein	gene_strand=>	locus_tag=ECB_00447	snp_type=synonymous
SNP	1561	416	REL606	494682	G	aa_new_seq=G	aa_position=700	aa_ref_seq=V	codon_new_seq=GGG	codon_position=2	codon_ref_seq=GTG	gene_list=ybbP	gene_name=ybbP	gene_position=2099	gene_product=predicted inner membrane protein	gene_strand=>	locus_tag=ECB_00447	snp_type=nonsynonymous
SNP	1562	424	REL606	501689	T	gene_name=ybbD/ylbG	gene_position=intergenic (+622/+122)	gene_product=hypothetical protein/predicted DNA-binding transcriptional regulator	locus_tag=ECB_00451/ECB_00452	snp_type=intergenic
SNP	1563	425	REL606	506450	G	aa_new_seq=A	aa_position=123	aa_ref_seq=A	codon_new_seq=GCG	codon_position=3	codon_ref_seq=GCT	gene_list=gcl	gene_name=gcl	gene_position=369	gene_product=glyoxylate carboligase	gene_strand=>	locus_tag=ECB_00457	snp_type=synonymous
SNP	1564	426	REL606	508599	C	aa_new_seq=Q	aa_position=242	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=hyi	gene_name=hyi	gene_position=724	gene_product=hydroxypyruvate isomerase	gene_strand=>	locus_tag=ECB_00458	snp_type=nonsynonymous
SNP	1565	427	REL606	516413	G	aa_new_seq=S	aa_position=349	aa_ref_seq=Y	codon_new_seq=TCC	codon_position=2	codon_ref_seq=TAC	gene_list=allC	gene_name=allC	gene_position=1046	gene_product=N-carbamoyl-L-amino acid amidohydrolase	gene_strand=<	locus_tag=ECB_00466	snp_type=nonsynonymous
SNP	1566	428	REL606	527702	C	aa_new_seq=N	aa_position=328	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=cysS	gene_name=cysS	gene_position=984	gene_product=cysteinyl-tRNA synthetase	gene_strand=>	locus_tag=ECB_00476	snp_type=nonsynonymous
SNP	1567	429	REL606	535238	G	aa_new_seq=E	aa_position=261	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=sfmH	gene_name=sfmH	gene_position=783	gene_product=predicted fimbrial-like adhesin protein	gene_strand=>	locus_tag=ECB_00483	snp_type=nonsynonymous
SNP	1568	430	REL606	540028	C	aa_new_seq=A	aa_position=26	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=renD	gene_name=renD	gene_position=77	gene_product=predicted protein	gene_strand=>	locus_tag=ECB_00492	snp_type=nonsynonymous
SNP	1569	431	REL606	543686	G	aa_new_seq=V	aa_position=115	aa_ref_seq=L	codon_new_seq=GTA	codon_position=1	codon_ref_seq=TTA	gene_list=ybcM	gene_name=ybcM	gene_position=343	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=>	locus_tag=ECB_00496	snp_type=nonsynonymous
SNP	1570	458	REL606	565482	G	aa_new_seq=A	aa_position=275	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=nfrA	gene_name=nfrA	gene_position=824	gene_product=bacteriophage N4 receptor, outer membrane subunit	gene_strand=<	locus_tag=ECB_00522	snp_type=nonsynonymous
SNP	1571	483	REL606	575344	C	aa_new_seq=L	aa_position=110	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=cusS	gene_name=cusS	gene_position=330	gene_product=sensory histidine kinase in two-component regulatory system with CusR, senses copper ions	gene_strand=<	locus_tag=ECB_00531	snp_type=nonsynonymous
AMP	1495	25	REL606	576325	6	2	gene_list=cusR	gene_name=cusR	gene_position=coding (17-22/684 nt)	gene_product=DNA-binding response regulator in two-component regulatory system with CusS	gene_strand=<	locus_tag=ECB_00532
SNP	1572	484	REL606	576388	C	gene_name=cusR/cusC	gene_position=intergenic (-42/-115)	gene_product=DNA-binding response regulator in two-component regulatory system with CusS/copper/silver efflux system, outer membrane component	locus_tag=ECB_00532/ECB_00533	snp_type=intergenic
SNP	1573	486	REL606	582155	C	aa_new_seq=Q	aa_position=847	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=cusA	gene_name=cusA	gene_position=2539	gene_product=copper/silver efflux system, membrane component	gene_strand=>	locus_tag=ECB_00536	snp_type=nonsynonymous
SNP	1574	491	REL606	597017	C	aa_new_seq=G	aa_position=51	aa_ref_seq=G	codon_new_seq=GGC	codon_position=3	codon_ref_seq=GGA	gene_list=entF	gene_name=entF	gene_position=153	gene_product=enterobactin synthase multienzyme complex component, ATP-dependent	gene_strand=>	locus_tag=ECB_00553	snp_type=synonymous
SNP	1575	493	REL606	627805	G	aa_new_seq=A	aa_position=276	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=citT	gene_name=citT	gene_position=827	gene_product=citrate:succinate antiporter	gene_strand=<	locus_tag=ECB_00580	snp_type=nonsynonymous
SNP	1576	495	REL606	635217	C	aa_new_seq=A	aa_position=132	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=citA	gene_name=citA	gene_position=395	gene_product=sensory histidine kinase in two-component regulatory system with citB	gene_strand=>	locus_tag=ECB_00589	snp_type=nonsynonymous
SNP	1577	496	REL606	640290	G	aa_new_seq=L	aa_position=77	aa_ref_seq=L	codon_new_seq=CTC	codon_position=3	codon_ref_seq=CTA	gene_list=ccrB	gene_name=ccrB	gene_position=231	gene_product=camphor resistance protein CrcB	gene_strand=<	locus_tag=ECB_00594	snp_type=synonymous
SNP	1578	497	REL606	643694	G	aa_new_seq=M	aa_position=90	aa_ref_seq=M	codon_new_seq=CTG	codon_position=1	codon_ref_seq=ATG	gene_list=ybeF	gene_name=ybeF	gene_position=268	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=<	locus_tag=ECB_00598	snp_type=synonymous
SNP	1579	498	REL606	648307	C	aa_new_seq=M	aa_position=197	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=mrdB	gene_name=mrdB	gene_position=591	gene_product=cell wall shape-determining protein	gene_strand=<	locus_tag=ECB_00603	snp_type=nonsynonymous
SNP	1580	499	REL606	649391	A	aa_new_seq=F	aa_position=471	aa_ref_seq=M	codon_new_seq=TTC	codon_position=1	codon_ref_seq=ATC	gene_list=mrdA	gene_name=mrdA	gene_position=1411	gene_product=transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2)	gene_strand=<	locus_tag=ECB_00604	snp_type=nonsynonymous
SNP	1581	500	REL606	659814	G	aa_new_seq=A	aa_position=174	aa_ref_seq=S	codon_new_seq=GCT	codon_position=1	codon_ref_seq=TCT	gene_list=ybeR	gene_name=ybeR	gene_position=520	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_00614	snp_type=nonsynonymous
SNP	1582	502	REL606	668787	C	aa_new_seq=D	aa_position=65	aa_ref_seq=Y	codon_new_seq=GAC	codon_position=1	codon_ref_seq=TAC	gene_list=gltI	gene_name=gltI	gene_position=193	gene_product=glutamate and aspartate transporter subunit	gene_strand=<	locus_tag=ECB_00623	snp_type=nonsynonymous
SNP	1583	513	REL606	681317	G	gene_name=asnB/nagD	gene_position=intergenic (-45/+352)	gene_product=asparagine synthetase B/UMP phosphatase	locus_tag=ECB_00631/ECB_00632	snp_type=intergenic
SNP	1584	514	REL606	683496	C	aa_new_seq=G	aa_position=65	aa_ref_seq=V	codon_new_seq=GGT	codon_position=2	codon_ref_seq=GTT	gene_list=nagC	gene_name=nagC	gene_position=194	gene_product=DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine	gene_strand=<	locus_tag=ECB_00633	snp_type=nonsynonymous
SNP	1585	515	REL606	690209	G	gene_name=glnS/ybfM	gene_position=intergenic (+357/-220)	gene_product=glutaminyl-tRNA synthetase/predicted outer membrane porin	locus_tag=ECB_00637/ECB_00638	snp_type=intergenic
SNP	1586	516	REL606	708381	G	aa_new_seq=R	aa_position=251	aa_ref_seq=S	codon_new_seq=CGC	codon_position=1	codon_ref_seq=AGC	gene_list=kdpB	gene_name=kdpB	gene_position=751	gene_product=potassium-transporting ATPase subunit B	gene_strand=<	locus_tag=ECB_00654	snp_type=nonsynonymous
SNP	1587	525	REL606	714041	C	aa_new_seq=N	aa_position=26	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=ybfO	gene_name=ybfO	gene_position=78	gene_product=conserved protein, rhs-like	gene_strand=>	locus_tag=ECB_00660	snp_type=nonsynonymous
SNP	1588	534	REL606	714992	C	aa_new_seq=N	aa_position=343	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=ybfO	gene_name=ybfO	gene_position=1029	gene_product=conserved protein, rhs-like	gene_strand=>	locus_tag=ECB_00660	snp_type=nonsynonymous
SNP	1589	547	REL606	721536	G	aa_new_seq=K	aa_position=379	aa_ref_seq=N	codon_new_seq=AAG	codon_position=3	codon_ref_seq=AAT	gene_list=phrB	gene_name=phrB	gene_position=1137	gene_product=deoxyribodipyrimidine photolyase, FAD-binding	gene_strand=>	locus_tag=ECB_00668	snp_type=nonsynonymous
SNP	1590	548	REL606	724534	C	aa_new_seq=L	aa_position=53	aa_ref_seq=M	codon_new_seq=CTC	codon_position=1	codon_ref_seq=ATC	gene_list=ybgJ	gene_name=ybgJ	gene_position=157	gene_product=predicted enzyme subunit	gene_strand=>	locus_tag=ECB_00671	snp_type=nonsynonymous
SNP	1591	549	REL606	725676	C	aa_new_seq=Q	aa_position=217	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=ybgK	gene_name=ybgK	gene_position=649	gene_product=predicted enzyme subunit	gene_strand=>	locus_tag=ECB_00672	snp_type=nonsynonymous
SNP	1592	550	REL606	728010	G	aa_new_seq=T	aa_position=182	aa_ref_seq=N	codon_new_seq=ACT	codon_position=2	codon_ref_seq=AAT	gene_list=abrB	gene_name=abrB	gene_position=545	gene_product=predicted regulator	gene_strand=<	locus_tag=ECB_00675	snp_type=nonsynonymous
SNP	1593	551	REL606	731342	G	aa_new_seq=A	aa_position=540	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=ybgQ	gene_name=ybgQ	gene_position=1619	gene_product=predicted outer membrane protein	gene_strand=<	locus_tag=ECB_00678	snp_type=nonsynonymous
SNP	1594	552	REL606	731494	G	aa_new_seq=P	aa_position=489	aa_ref_seq=P	codon_new_seq=CCC	codon_position=3	codon_ref_seq=CCA	gene_list=ybgQ	gene_name=ybgQ	gene_position=1467	gene_product=predicted outer membrane protein	gene_strand=<	locus_tag=ECB_00678	snp_type=synonymous
SNP	1595	553	REL606	735533	G	gene_name=gltA/sdhC	gene_position=intergenic (-274/-435)	gene_product=citrate synthase/succinate dehydrogenase cytochrome b556 large membrane subunit	locus_tag=ECB_00680/ECB_00681	snp_type=intergenic
SNP	1596	554	REL606	743093	A	aa_new_seq=M	aa_position=261	aa_ref_seq=M	codon_new_seq=ATG	codon_position=1	codon_ref_seq=GTG	gene_list=sucB	gene_name=sucB	gene_position=781	gene_product=dihydrolipoamide acetyltransferase	gene_strand=>	locus_tag=ECB_00686	snp_type=synonymous
SNP	1597	555	REL606	749853	C	aa_new_seq=L	aa_position=332	aa_ref_seq=M	codon_new_seq=CTC	codon_position=1	codon_ref_seq=ATC	gene_list=ybgG	gene_name=ybgG	gene_position=994	gene_product=alpha-mannosidase	gene_strand=>	locus_tag=ECB_00691	snp_type=nonsynonymous
SNP	1598	567	REL606	766329	G	aa_new_seq=R	aa_position=23	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=aroG	gene_name=aroG	gene_position=68	gene_product=3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible	gene_strand=>	locus_tag=ECB_00707	snp_type=nonsynonymous
SNP	1599	569	REL606	786559	G	aa_new_seq=T	aa_position=420	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=ybhC	gene_name=ybhC	gene_position=1259	gene_product=predicted pectinesterase	gene_strand=<	locus_tag=ECB_00725	snp_type=nonsynonymous
SNP	1600	570	REL606	791065	C	gene_name=ECB_00731/ECB_00732	gene_position=intergenic (+311/-390)	gene_product=conserved hypothetical protein/conserved hypothetical protein	locus_tag=ECB_00731/ECB_00732	snp_type=intergenic
SNP	1601	571	REL606	791672	G	aa_new_seq=R	aa_position=73	aa_ref_seq=L	codon_new_seq=CGT	codon_position=2	codon_ref_seq=CTT	gene_list=ECB_00732	gene_name=ECB_00732	gene_position=218	gene_product=conserved hypothetical protein	gene_strand=>	locus_tag=ECB_00732	snp_type=nonsynonymous
SNP	1602	572	REL606	808158	G	aa_new_seq=L	aa_position=669	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=uvrB	gene_name=uvrB	gene_position=2007	gene_product=excinuclease ABC subunit B	gene_strand=>	locus_tag=ECB_00746	snp_type=nonsynonymous
SNP	1603	573	REL606	816306	G	aa_new_seq=S	aa_position=20	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=ybhO	gene_name=ybhO	gene_position=59	gene_product=cardiolipin synthase 2	gene_strand=<	locus_tag=ECB_00756	snp_type=nonsynonymous
SNP	1604	574	REL606	828820	G	aa_new_seq=V	aa_position=316	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=ybiB	gene_name=ybiB	gene_position=948	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_00767	snp_type=synonymous
SNP	1605	575	REL606	842160	C	aa_new_seq=*	aa_position=188	aa_ref_seq=L	codon_new_seq=TGA	codon_position=2	codon_ref_seq=TTA	gene_list=ybiF	gene_name=ybiF	gene_position=563	gene_product=threonine and homoserine efflux system	gene_strand=<	locus_tag=ECB_00780	snp_type=nonsynonymous
SNP	1606	576	REL606	847206	G	aa_new_seq=*	aa_position=312	aa_ref_seq=L	codon_new_seq=TGA	codon_position=2	codon_ref_seq=TTA	gene_list=ybiR	gene_name=ybiR	gene_position=935	gene_product=predicted transporter	gene_strand=>	locus_tag=ECB_00785	snp_type=nonsynonymous
SNP	1607	577	REL606	852041	C	aa_new_seq=L	aa_position=180	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=ybiV	gene_name=ybiV	gene_position=540	gene_product=predicted hydrolase	gene_strand=<	locus_tag=ECB_00789	snp_type=nonsynonymous
SNP	1608	578	REL606	855272	C	aa_new_seq=L	aa_position=273	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=ybiY	gene_name=ybiY	gene_position=819	gene_product=predicted pyruvate formate lyase activating enzyme	gene_strand=<	locus_tag=ECB_00791	snp_type=synonymous
SNP	1609	579	REL606	869618	G	aa_new_seq=Q	aa_position=324	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=yliG	gene_name=yliG	gene_position=970	gene_product=predicted SAM-dependent methyltransferase	gene_strand=<	locus_tag=ECB_00802	snp_type=nonsynonymous
SNP	1610	580	REL606	876767	C	aa_new_seq=A	aa_position=181	aa_ref_seq=A	codon_new_seq=GCC	codon_position=3	codon_ref_seq=GCA	gene_list=cmr	gene_name=cmr	gene_position=543	gene_product=multidrug efflux system protein	gene_strand=>	locus_tag=ECB_00809	snp_type=synonymous
SNP	1611	581	REL606	889497	G	gene_name=ECB_00828/ECB_00829	gene_position=intergenic (-78/-194)	gene_product=conserved hypothetical protein/conserved hypothetical protein	locus_tag=ECB_00828/ECB_00829	snp_type=intergenic
SNP	1612	582	REL606	894179	G	aa_new_seq=L	aa_position=191	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=ECB_00833	gene_name=ECB_00833	gene_position=571	gene_product=Terminase, ATPase subunit	gene_strand=<	locus_tag=ECB_00833	snp_type=nonsynonymous
SNP	1613	583	REL606	902709	G	aa_new_seq=A	aa_position=126	aa_ref_seq=A	codon_new_seq=GCC	codon_position=3	codon_ref_seq=GCA	gene_list=tfaE	gene_name=tfaE	gene_position=378	gene_product=e14 prophage; predicted tail fiber assembly protein	gene_strand=<	locus_tag=ECB_00847	snp_type=synonymous
SNP	1614	584	REL606	909616	G	gene_name=rimK/ybjN	gene_position=intergenic (+40/-48)	gene_product=ribosomal protein S6 modification protein/predicted oxidoreductase	locus_tag=ECB_00857/ECB_00858	snp_type=intergenic
SNP	1615	585	REL606	910316	C	gene_name=ybjN/potF	gene_position=intergenic (+176/-175)	gene_product=predicted oxidoreductase/putrescine transporter subunit: periplasmic-binding component of ABC superfamily	locus_tag=ECB_00858/ECB_00859	snp_type=intergenic
SNP	1616	586	REL606	918143	C	aa_new_seq=L	aa_position=33	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=artM	gene_name=artM	gene_position=99	gene_product=arginine transporter subunit	gene_strand=<	locus_tag=ECB_00866	snp_type=nonsynonymous
SNP	1617	587	REL606	921642	G	aa_new_seq=G	aa_position=8	aa_ref_seq=V	codon_new_seq=GGC	codon_position=2	codon_ref_seq=GTC	gene_list=ybjR	gene_name=ybjR	gene_position=23	gene_product=predicted amidase and lipoprotein	gene_strand=>	locus_tag=ECB_00872	snp_type=nonsynonymous
SNP	1618	588	REL606	931180	C	aa_new_seq=V	aa_position=129	aa_ref_seq=L	codon_new_seq=GTA	codon_position=1	codon_ref_seq=TTA	gene_list=ybjE	gene_name=ybjE	gene_position=385	gene_product=predicted transporter	gene_strand=<	locus_tag=ECB_00879	snp_type=nonsynonymous
SNP	1619	591	REL606	940678	T	aa_new_seq=L	aa_position=189	aa_ref_seq=P	codon_new_seq=CTG	codon_position=2	codon_ref_seq=CCG	gene_list=clpA	gene_name=clpA	gene_position=566	gene_product=ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity	gene_strand=>	locus_tag=ECB_00887	snp_type=nonsynonymous
SNP	1620	595	REL606	969305	G	aa_new_seq=T	aa_position=448	aa_ref_seq=N	codon_new_seq=ACC	codon_position=2	codon_ref_seq=AAC	gene_list=pflB	gene_name=pflB	gene_position=1343	gene_product=pyruvate formate lyase I	gene_strand=<	locus_tag=ECB_00907	snp_type=nonsynonymous
SNP	1621	596	REL606	970635	G	aa_new_seq=H	aa_position=5	aa_ref_seq=N	codon_new_seq=CAT	codon_position=1	codon_ref_seq=AAT	gene_list=pflB	gene_name=pflB	gene_position=13	gene_product=pyruvate formate lyase I	gene_strand=<	locus_tag=ECB_00907	snp_type=nonsynonymous
SNP	1622	597	REL606	971637	G	gene_name=focA/ycaO	gene_position=intergenic (-78/+327)	gene_product=formate transporter/hypothetical protein	locus_tag=ECB_00908/ECB_00909	snp_type=intergenic
SNP	1623	598	REL606	999454	C	aa_new_seq=T	aa_position=439	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=ycbB	gene_name=ycbB	gene_position=1316	gene_product=predicted carboxypeptidase	gene_strand=>	locus_tag=ECB_00929	snp_type=nonsynonymous
SNP	1624	599	REL606	1003478	C	aa_new_seq=S	aa_position=199	aa_ref_seq=S	codon_new_seq=TCG	codon_position=3	codon_ref_seq=TCT	gene_list=ompF	gene_name=ompF	gene_position=597	gene_product=outer membrane porin 1a (Ia;b;F)	gene_strand=<	locus_tag=ECB_00933	snp_type=synonymous
SNP	1625	600	REL606	1004193	A	gene_name=ompF/asnS	gene_position=intergenic (-119/+483)	gene_product=outer membrane porin 1a (Ia;b;F)/asparaginyl-tRNA synthetase	locus_tag=ECB_00933/ECB_00934	snp_type=intergenic
SNP	1626	601	REL606	1004251	C	gene_name=ompF/asnS	gene_position=intergenic (-177/+425)	gene_product=outer membrane porin 1a (Ia;b;F)/asparaginyl-tRNA synthetase	locus_tag=ECB_00933/ECB_00934	snp_type=intergenic
SNP	1627	602	REL606	1016770	G	aa_new_seq=S	aa_position=155	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=ycbS	gene_name=ycbS	gene_position=464	gene_product=predicted outer membrane usher protein	gene_strand=>	locus_tag=ECB_00944	snp_type=nonsynonymous
SNP	1628	603	REL606	1016891	G	aa_new_seq=S	aa_position=195	aa_ref_seq=S	codon_new_seq=TCG	codon_position=3	codon_ref_seq=TCT	gene_list=ycbS	gene_name=ycbS	gene_position=585	gene_product=predicted outer membrane usher protein	gene_strand=>	locus_tag=ECB_00944	snp_type=synonymous
SNP	1629	604	REL606	1036240	G	aa_new_seq=A	aa_position=302	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=ompA	gene_name=ompA	gene_position=905	gene_product=outer membrane protein A (3a;II*;G;d)	gene_strand=<	locus_tag=ECB_00961	snp_type=nonsynonymous
SNP	1630	605	REL606	1044908	C	gene_name=yccT/yccU	gene_position=intergenic (-44/-129)	gene_product=hypothetical protein/predicted CoA-binding protein with NAD(P)-binding Rossmann-fold domain	locus_tag=ECB_00968/ECB_00969	snp_type=intergenic
SNP	1631	606	REL606	1061648	C	aa_new_seq=G	aa_position=40	aa_ref_seq=G	codon_new_seq=GGG	codon_position=3	codon_ref_seq=GGT	gene_list=yccY	gene_name=yccY	gene_position=120	gene_product=phosphotyrosine-protein phosphatase	gene_strand=<	locus_tag=ECB_00985	snp_type=synonymous
SNP	1632	607	REL606	1086834	C	aa_new_seq=G	aa_position=136	aa_ref_seq=C	codon_new_seq=GGC	codon_position=1	codon_ref_seq=TGC	gene_list=ycdI	gene_name=ycdI	gene_position=406	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_01011	snp_type=nonsynonymous
SNP	1633	608	REL606	1098758	C	aa_new_seq=D	aa_position=77	aa_ref_seq=E	codon_new_seq=GAC	codon_position=3	codon_ref_seq=GAA	gene_list=ycdO	gene_name=ycdO	gene_position=231	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01020	snp_type=nonsynonymous
SNP	1634	609	REL606	1107001	T	aa_new_seq=*	aa_position=525	aa_ref_seq=S	codon_new_seq=TAA	codon_position=2	codon_ref_seq=TCA	gene_list=ycdS	gene_name=ycdS	gene_position=1574	gene_product=predicted outer membrane protein	gene_strand=<	locus_tag=ECB_01026	snp_type=nonsynonymous
SNP	1635	610	REL606	1108953	G	gene_name=ycdS/ycdT	gene_position=intergenic (-379/-208)	gene_product=predicted outer membrane protein/predicted diguanylate cyclase	locus_tag=ECB_01026/ECB_01027	snp_type=intergenic
SNP	1636	632	REL606	1118093	C	gene_name=csgD/csgB	gene_position=intergenic (-328/-427)	gene_product=DNA-binding transcriptional activator in two-component regulatory system/curlin nucleator protein, minor subunit in curli complex	locus_tag=ECB_01037/ECB_01038	snp_type=intergenic
SNP	1637	633	REL606	1121972	C	aa_new_seq=A	aa_position=350	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=ymdC	gene_name=ymdC	gene_position=1049	gene_product=predicted hydrolase	gene_strand=>	locus_tag=ECB_01043	snp_type=nonsynonymous
SNP	1638	634	REL606	1129502	C	aa_new_seq=L	aa_position=186	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=yceE	gene_name=yceE	gene_position=558	gene_product=predicted drug efflux system	gene_strand=<	locus_tag=ECB_01049	snp_type=nonsynonymous
SNP	1639	635	REL606	1136897	G	aa_new_seq=H	aa_position=95	aa_ref_seq=N	codon_new_seq=CAC	codon_position=1	codon_ref_seq=AAC	gene_list=pyrC	gene_name=pyrC	gene_position=283	gene_product=dihydroorotase	gene_strand=<	locus_tag=ECB_01058	snp_type=nonsynonymous
SNP	1640	636	REL606	1147072	G	aa_new_seq=R	aa_position=216	aa_ref_seq=L	codon_new_seq=CGC	codon_position=2	codon_ref_seq=CTC	gene_list=flgD	gene_name=flgD	gene_position=647	gene_product=flagellar basal body rod modification protein D	gene_strand=>	locus_tag=ECB_01071	snp_type=nonsynonymous
SNP	1641	637	REL606	1166321	G	aa_new_seq=A	aa_position=46	aa_ref_seq=A	codon_new_seq=GCG	codon_position=3	codon_ref_seq=GCT	gene_list=acpP	gene_name=acpP	gene_position=138	gene_product=acyl carrier protein	gene_strand=>	locus_tag=ECB_01090	snp_type=synonymous
SNP	1642	638	REL606	1171882	G	aa_new_seq=M	aa_position=179	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=ycfH	gene_name=ycfH	gene_position=537	gene_product=predicted metallodependent hydrolase	gene_strand=>	locus_tag=ECB_01096	snp_type=nonsynonymous
SNP	1643	639	REL606	1175474	G	aa_new_seq=A	aa_position=216	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=fhuE	gene_name=fhuE	gene_position=647	gene_product=ferric-rhodotorulic acid outer membrane transporter	gene_strand=<	locus_tag=ECB_01098	snp_type=nonsynonymous
SNP	1644	640	REL606	1184149	C	aa_new_seq=R	aa_position=274	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=ycfS	gene_name=ycfS	gene_position=821	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_01109	snp_type=nonsynonymous
SNP	1645	642	REL606	1216957	C	aa_new_seq=Q	aa_position=17	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=ymgC	gene_name=ymgC	gene_position=49	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01142	snp_type=nonsynonymous
SNP	1646	643	REL606	1218309	C	aa_new_seq=A	aa_position=274	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=ycgG	gene_name=ycgG	gene_position=821	gene_product=conserved inner membrane protein	gene_strand=>	locus_tag=ECB_01143	snp_type=nonsynonymous
SNP	1647	644	REL606	1221358	G	gene_list=ycgH	gene_name=ycgH	gene_position=pseudogene (1597/2622 nt)	gene_product=predicted protein; b4491	gene_strand=>	locus_tag=ECB_01145	snp_type=pseudogene
SNP	1648	645	REL606	1228779	G	aa_new_seq=L	aa_position=180	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=ycgM	gene_name=ycgM	gene_position=540	gene_product=predicted isomerase/hydrolase	gene_strand=>	locus_tag=ECB_01155	snp_type=nonsynonymous
SNP	1649	646	REL606	1230389	A	gene_list=hlyE	gene_name=hlyE	gene_position=pseudogene (156/516 nt)	gene_product=frameshift; hemolysin E; b1182_2	gene_strand=<	locus_tag=ECB_01157	snp_type=pseudogene
SNP	1650	647	REL606	1243473	C	aa_new_seq=A	aa_position=48	aa_ref_seq=A	codon_new_seq=GCC	codon_position=3	codon_ref_seq=GCA	gene_list=mltE	gene_name=mltE	gene_position=144	gene_product=lytic murein endotransglycosylase E	gene_strand=>	locus_tag=ECB_01168	snp_type=synonymous
SNP	1651	648	REL606	1244728	C	gene_name=ycgR/ymgE	gene_position=intergenic (-51/-150)	gene_product=protein involved in flagellar function/predicted inner membrane protein	locus_tag=ECB_01169/ECB_01170	snp_type=intergenic
SNP	1652	649	REL606	1248380	C	aa_new_seq=E	aa_position=295	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=dhaM	gene_name=dhaM	gene_position=885	gene_product=fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component	gene_strand=<	locus_tag=ECB_01173	snp_type=nonsynonymous
SNP	1653	650	REL606	1252845	G	aa_new_seq=D	aa_position=544	aa_ref_seq=Y	codon_new_seq=GAC	codon_position=1	codon_ref_seq=TAC	gene_list=dhaR	gene_name=dhaR	gene_position=1630	gene_product=predicted DNA-binding transcriptional regulator, dihydroxyacetone	gene_strand=>	locus_tag=ECB_01176	snp_type=nonsynonymous
SNP	1654	666	REL606	1277282	G	aa_new_seq=M	aa_position=163	aa_ref_seq=M	codon_new_seq=CTG	codon_position=1	codon_ref_seq=ATG	gene_list=narX	gene_name=narX	gene_position=487	gene_product=sensory histidine kinase in two-component regulatory system with NarL	gene_strand=<	locus_tag=ECB_01200	snp_type=synonymous
SNP	1655	667	REL606	1278683	C	aa_new_seq=L	aa_position=193	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=narK	gene_name=narK	gene_position=577	gene_product=nitrate/nitrite transporter	gene_strand=>	locus_tag=ECB_01201	snp_type=nonsynonymous
SNP	1656	668	REL606	1286699	A	gene_name=narI/ECB_01206	gene_position=intergenic (+23/-160)	gene_product=nitrate reductase 1, gamma (cytochrome b(NR)) subunit/hypothetical protein	locus_tag=ECB_01205/ECB_01206	snp_type=intergenic
SNP	1657	671	REL606	1305994	C	aa_new_seq=L	aa_position=82	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=cls	gene_name=cls	gene_position=246	gene_product=cardiolipin synthetase	gene_strand=<	locus_tag=ECB_01223	snp_type=synonymous
SNP	1658	673	REL606	1329516	T	aa_new_seq=Y	aa_position=33	aa_ref_seq=H	codon_new_seq=TAC	codon_position=1	codon_ref_seq=CAC	gene_list=topA	gene_name=topA	gene_position=97	gene_product=DNA topoisomerase I	gene_strand=>	locus_tag=ECB_01250	snp_type=nonsynonymous
SNP	1659	674	REL606	1329567	G	aa_new_seq=A	aa_position=50	aa_ref_seq=S	codon_new_seq=GCT	codon_position=1	codon_ref_seq=TCT	gene_list=topA	gene_name=topA	gene_position=148	gene_product=DNA topoisomerase I	gene_strand=>	locus_tag=ECB_01250	snp_type=nonsynonymous
SNP	1660	675	REL606	1340917	C	aa_new_seq=P	aa_position=209	aa_ref_seq=Q	codon_new_seq=CCG	codon_position=2	codon_ref_seq=CAG	gene_list=pyrF	gene_name=pyrF	gene_position=626	gene_product=orotidine 5'-phosphate decarboxylase	gene_strand=>	locus_tag=ECB_01258	snp_type=nonsynonymous
SNP	1661	676	REL606	1342163	C	aa_new_seq=E	aa_position=185	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=yciT	gene_name=yciT	gene_position=555	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=<	locus_tag=ECB_01261	snp_type=nonsynonymous
SNP	1662	677	REL606	1344571	G	aa_new_seq=T	aa_position=181	aa_ref_seq=N	codon_new_seq=ACT	codon_position=2	codon_ref_seq=AAT	gene_list=yciR	gene_name=yciR	gene_position=542	gene_product=modulator of Rnase II stability	gene_strand=<	locus_tag=ECB_01262	snp_type=nonsynonymous
SNP	1663	678	REL606	1344677	C	aa_new_seq=M	aa_position=146	aa_ref_seq=M	codon_new_seq=GTG	codon_position=1	codon_ref_seq=TTG	gene_list=yciR	gene_name=yciR	gene_position=436	gene_product=modulator of Rnase II stability	gene_strand=<	locus_tag=ECB_01262	snp_type=synonymous
SNP	1664	679	REL606	1347413	C	aa_new_seq=R	aa_position=355	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=yciW	gene_name=yciW	gene_position=1064	gene_product=predicted oxidoreductase	gene_strand=<	locus_tag=ECB_01264	snp_type=nonsynonymous
SNP	1665	680	REL606	1355298	C	aa_new_seq=R	aa_position=61	aa_ref_seq=L	codon_new_seq=CGT	codon_position=2	codon_ref_seq=CTT	gene_list=sapA	gene_name=sapA	gene_position=182	gene_product=predicted antimicrobial peptide transporter subunit	gene_strand=<	locus_tag=ECB_01271	snp_type=nonsynonymous
SNP	1666	681	REL606	1359652	G	aa_new_seq=L	aa_position=55	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=ycjL	gene_name=ycjL	gene_position=165	gene_product=gamma-Glu-GABA hydrolase	gene_strand=>	locus_tag=ECB_01275	snp_type=synonymous
SNP	1667	682	REL606	1364853	G	aa_new_seq=K	aa_position=312	aa_ref_seq=N	codon_new_seq=AAG	codon_position=3	codon_ref_seq=AAT	gene_list=goaG	gene_name=goaG	gene_position=936	gene_product=GABA aminotransferase, PLP-dependent	gene_strand=>	locus_tag=ECB_01279	snp_type=nonsynonymous
SNP	1668	683	REL606	1388180	G	aa_new_seq=R	aa_position=294	aa_ref_seq=S	codon_new_seq=AGG	codon_position=3	codon_ref_seq=AGT	gene_list=ycjG	gene_name=ycjG	gene_position=882	gene_product=L-Ala-D/L-Glu epimerase	gene_strand=>	locus_tag=ECB_01302	snp_type=nonsynonymous
SNP	1669	684	REL606	1394215	C	aa_new_seq=R	aa_position=26	aa_ref_seq=M	codon_new_seq=AGG	codon_position=2	codon_ref_seq=ATG	gene_list=ynaI	gene_name=ynaI	gene_position=77	gene_product=conserved inner membrane protein	gene_strand=<	locus_tag=ECB_01308	snp_type=nonsynonymous
SNP	1670	685	REL606	1397197	C	aa_new_seq=L	aa_position=70	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=ogt	gene_name=ogt	gene_position=210	gene_product=O-6-alkylguanine-DNA:cysteine-protein methyltransferase	gene_strand=<	locus_tag=ECB_01312	snp_type=nonsynonymous
SNP	1671	686	REL606	1402836	C	gene_name=abgR/ydaL	gene_position=intergenic (+17/-313)	gene_product=predicted DNA-binding transcriptional regulator/hypothetical protein	locus_tag=ECB_01316/ECB_01317	snp_type=intergenic
SNP	1672	687	REL606	1412217	C	aa_new_seq=V	aa_position=780	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=recE	gene_name=recE	gene_position=2340	gene_product=exonuclease VIII, 5' -> 3' specific dsDNA exonuclease	gene_strand=<	locus_tag=ECB_01327	snp_type=synonymous
SNP	1673	689	REL606	1417576	G	aa_new_seq=R	aa_position=16	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=ydfQ	gene_name=ydfQ	gene_position=47	gene_product=predicted lysozyme	gene_strand=>	locus_tag=ECB_01337	snp_type=nonsynonymous
SNP	1674	692	REL606	1419306	G	aa_new_seq=W	aa_position=215	aa_ref_seq=C	codon_new_seq=TGG	codon_position=3	codon_ref_seq=TGT	gene_list=trkG	gene_name=trkG	gene_position=645	gene_product=potassium transporter subunit	gene_strand=>	locus_tag=ECB_01339	snp_type=nonsynonymous
SNP	1675	710	REL606	1447783	C	aa_new_seq=S	aa_position=75	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=ynbB	gene_name=ynbB	gene_position=224	gene_product=predicted CDP-diglyceride synthase	gene_strand=>	locus_tag=ECB_01364	snp_type=nonsynonymous
SNP	1676	711	REL606	1456048	C	aa_new_seq=R	aa_position=1200	aa_ref_seq=R	codon_new_seq=CGC	codon_position=3	codon_ref_seq=CGA	gene_list=hrpA	gene_name=hrpA	gene_position=3600	gene_product=ATP-dependent helicase	gene_strand=>	locus_tag=ECB_01368	snp_type=synonymous
SNP	1677	712	REL606	1456319	C	gene_name=hrpA/ydcF	gene_position=intergenic (+25/-247)	gene_product=ATP-dependent helicase/hypothetical protein	locus_tag=ECB_01368/ECB_01369	snp_type=intergenic
SNP	1678	714	REL606	1463096	C	aa_new_seq=A	aa_position=173	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=trg	gene_name=trg	gene_position=518	gene_product=methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor	gene_strand=>	locus_tag=ECB_01378	snp_type=nonsynonymous
SNP	1679	715	REL606	1464880	A	aa_new_seq=Y	aa_position=101	aa_ref_seq=D	codon_new_seq=TAT	codon_position=1	codon_ref_seq=GAT	gene_list=ydcI	gene_name=ydcI	gene_position=301	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=<	locus_tag=ECB_01379	snp_type=nonsynonymous
SNP	1680	716	REL606	1470975	G	aa_new_seq=V	aa_position=98	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=tehA	gene_name=tehA	gene_position=294	gene_product=potassium-tellurite ethidium and proflavin transporter	gene_strand=>	locus_tag=ECB_01386	snp_type=synonymous
SNP	1681	717	REL606	1477302	C	aa_new_seq=L	aa_position=138	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=ydcP	gene_name=ydcP	gene_position=412	gene_product=predicted peptidase	gene_strand=>	locus_tag=ECB_01393	snp_type=nonsynonymous
SNP	1682	718	REL606	1496171	C	gene_name=ansP/yncG	gene_position=intergenic (-79/-188)	gene_product=L-asparagine transporter/predicted enzyme	locus_tag=ECB_01410/ECB_01411	snp_type=intergenic
SNP	1683	736	REL606	1518024	C	aa_new_seq=S	aa_position=63	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=narU	gene_name=narU	gene_position=188	gene_product=nitrate/nitrite transporter	gene_strand=<	locus_tag=ECB_01427	snp_type=nonsynonymous
SNP	1684	737	REL606	1520150	G	aa_new_seq=V	aa_position=10	aa_ref_seq=V	codon_new_seq=GTC	codon_position=3	codon_ref_seq=GTA	gene_list=yddL	gene_name=yddL	gene_position=30	gene_product=predicted lipoprotein	gene_strand=<	locus_tag=ECB_01430	snp_type=synonymous
SNP	1685	738	REL606	1520715	C	aa_new_seq=C	aa_position=183	aa_ref_seq=F	codon_new_seq=TGT	codon_position=2	codon_ref_seq=TTT	gene_list=yddG	gene_name=yddG	gene_position=548	gene_product=predicted methyl viologen efflux pump	gene_strand=<	locus_tag=ECB_01431	snp_type=nonsynonymous
SNP	1686	740	REL606	1522293	C	aa_new_seq=T	aa_position=248	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=fdnG	gene_name=fdnG	gene_position=743	gene_product=formate dehydrogenase-N, alpha subunit, nitrate-inducible	gene_strand=>	locus_tag=ECB_01432	snp_type=nonsynonymous
SNP	1687	741	REL606	1525072	G	aa_new_seq=E	aa_position=154	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=fdnH	gene_name=fdnH	gene_position=462	gene_product=formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible	gene_strand=>	locus_tag=ECB_01433	snp_type=nonsynonymous
SNP	1688	742	REL606	1532839	C	aa_new_seq=G	aa_position=39	aa_ref_seq=G	codon_new_seq=GGG	codon_position=3	codon_ref_seq=GGT	gene_list=yddP	gene_name=yddP	gene_position=117	gene_product=D-ala-D-ala transporter subunit	gene_strand=<	locus_tag=ECB_01442	snp_type=synonymous
SNP	1689	743	REL606	1541538	G	aa_new_seq=P	aa_position=413	aa_ref_seq=T	codon_new_seq=CCC	codon_position=1	codon_ref_seq=ACC	gene_list=yddW	gene_name=yddW	gene_position=1237	gene_product=predicted liprotein	gene_strand=<	locus_tag=ECB_01449	snp_type=nonsynonymous
SNP	1690	744	REL606	1544672	G	aa_new_seq=T	aa_position=442	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=gadB	gene_name=gadB	gene_position=1325	gene_product=glutamate decarboxylase B, PLP-dependent	gene_strand=<	locus_tag=ECB_01451	snp_type=nonsynonymous
SNP	1691	751	REL606	1547418	G	aa_new_seq=A	aa_position=579	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=pqqL	gene_name=pqqL	gene_position=1736	gene_product=predicted peptidase	gene_strand=<	locus_tag=ECB_01452	snp_type=nonsynonymous
SNP	1692	752	REL606	1555678	C	aa_new_seq=V	aa_position=266	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=ydeN	gene_name=ydeN	gene_position=798	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_01456	snp_type=synonymous
SNP	1693	753	REL606	1570553	C	gene_list=ydeU	gene_name=ydeU	gene_position=pseudogene (80/1401 nt)	gene_product=b1509; conserved protein	gene_strand=<	locus_tag=ECB_01471	snp_type=pseudogene
SNP	1694	754	REL606	1574967	G	aa_new_seq=L	aa_position=201	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=yneE	gene_name=yneE	gene_position=601	gene_product=conserved inner membrane protein	gene_strand=<	locus_tag=ECB_01477	snp_type=nonsynonymous
SNP	1695	755	REL606	1575413	C	aa_new_seq=C	aa_position=52	aa_ref_seq=F	codon_new_seq=TGC	codon_position=2	codon_ref_seq=TTC	gene_list=yneE	gene_name=yneE	gene_position=155	gene_product=conserved inner membrane protein	gene_strand=<	locus_tag=ECB_01477	snp_type=nonsynonymous
SNP	1696	756	REL606	1588943	G	gene_name=eamA/ydeE	gene_position=intergenic (-40/-155)	gene_product=cysteine and O-acetyl-L-serine efflux system/predicted transporter	locus_tag=ECB_01492/ECB_01493	snp_type=intergenic
SNP	1697	757	REL606	1599820	C	aa_new_seq=G	aa_position=78	aa_ref_seq=V	codon_new_seq=GGG	codon_position=2	codon_ref_seq=GTG	gene_list=ydfJ	gene_name=ydfJ	gene_position=233	gene_product=predicted transporter	gene_strand=<	locus_tag=ECB_01502	snp_type=nonsynonymous
SNP	1698	786	REL606	1611621	G	aa_new_seq=A	aa_position=34	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=ydfP	gene_name=ydfP	gene_position=101	gene_product=conserved protein	gene_strand=<	locus_tag=ECB_01518	snp_type=nonsynonymous
SNP	1699	791	REL606	1633778	C	aa_new_seq=L	aa_position=134	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=speG	gene_name=speG	gene_position=400	gene_product=spermidine N1-acetyltransferase	gene_strand=>	locus_tag=ECB_01553	snp_type=nonsynonymous
SNP	1700	792	REL606	1634870	G	aa_new_seq=M	aa_position=37	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=ynfD	gene_name=ynfD	gene_position=111	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01555	snp_type=nonsynonymous
SNP	1701	793	REL606	1642043	C	aa_new_seq=L	aa_position=115	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=ynfI	gene_name=ynfI	gene_position=343	gene_product=twin-argninine leader-binding protein for DmsA and TorA	gene_strand=>	locus_tag=ECB_01560	snp_type=nonsynonymous
SNP	1702	794	REL606	1647889	C	aa_new_seq=G	aa_position=332	aa_ref_seq=G	codon_new_seq=GGC	codon_position=3	codon_ref_seq=GGA	gene_list=ynfM	gene_name=ynfM	gene_position=996	gene_product=predicted transporter	gene_strand=>	locus_tag=ECB_01565	snp_type=synonymous
SNP	1703	795	REL606	1649169	G	aa_new_seq=M	aa_position=5	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=ydgD	gene_name=ydgD	gene_position=15	gene_product=predicted peptidase	gene_strand=>	locus_tag=ECB_01567	snp_type=nonsynonymous
SNP	1704	796	REL606	1659543	G	aa_new_seq=G	aa_position=67	aa_ref_seq=C	codon_new_seq=GGT	codon_position=1	codon_ref_seq=TGT	gene_list=rstA	gene_name=rstA	gene_position=199	gene_product=DNA-binding response regulator in two-component regulatory system with RstB	gene_strand=>	locus_tag=ECB_01577	snp_type=nonsynonymous
SNP	1705	797	REL606	1661682	G	aa_new_seq=V	aa_position=77	aa_ref_seq=L	codon_new_seq=GTA	codon_position=1	codon_ref_seq=TTA	gene_list=tus	gene_name=tus	gene_position=229	gene_product=DNA replication terminus site-binding protein	gene_strand=>	locus_tag=ECB_01579	snp_type=nonsynonymous
SNP	1706	798	REL606	1682608	C	aa_new_seq=H	aa_position=55	aa_ref_seq=Q	codon_new_seq=CAC	codon_position=3	codon_ref_seq=CAA	gene_list=ydgK	gene_name=ydgK	gene_position=165	gene_product=conserved inner membrane protein	gene_strand=>	locus_tag=ECB_01596	snp_type=nonsynonymous
SNP	1707	800	REL606	1690600	G	aa_new_seq=C	aa_position=213	aa_ref_seq=F	codon_new_seq=TGC	codon_position=2	codon_ref_seq=TTC	gene_list=ydgR	gene_name=ydgR	gene_position=638	gene_product=putative tripeptide transporter permease	gene_strand=>	locus_tag=ECB_01604	snp_type=nonsynonymous
SNP	1708	801	REL606	1692302	C	aa_new_seq=R	aa_position=261	aa_ref_seq=M	codon_new_seq=AGG	codon_position=2	codon_ref_seq=ATG	gene_list=pdxY	gene_name=pdxY	gene_position=782	gene_product=pyridoxine kinase	gene_strand=<	locus_tag=ECB_01606	snp_type=nonsynonymous
SNP	1709	802	REL606	1706773	A	aa_new_seq=S	aa_position=165	aa_ref_seq=R	codon_new_seq=AGC	codon_position=1	codon_ref_seq=CGC	gene_list=lhr	gene_name=lhr	gene_position=493	gene_product=predicted ATP-dependent helicase	gene_strand=>	locus_tag=ECB_01623	snp_type=nonsynonymous
SNP	1710	803	REL606	1707834	G	aa_new_seq=A	aa_position=518	aa_ref_seq=A	codon_new_seq=GCG	codon_position=3	codon_ref_seq=GCT	gene_list=lhr	gene_name=lhr	gene_position=1554	gene_product=predicted ATP-dependent helicase	gene_strand=>	locus_tag=ECB_01623	snp_type=synonymous
SNP	1711	804	REL606	1708787	C	aa_new_seq=S	aa_position=836	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=lhr	gene_name=lhr	gene_position=2507	gene_product=predicted ATP-dependent helicase	gene_strand=>	locus_tag=ECB_01623	snp_type=nonsynonymous
SNP	1712	805	REL606	1712230	G	aa_new_seq=S	aa_position=201	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=ydhO	gene_name=ydhO	gene_position=602	gene_product=predicted lipoprotein	gene_strand=>	locus_tag=ECB_01625	snp_type=nonsynonymous
SNP	1713	806	REL606	1714815	C	aa_new_seq=M	aa_position=10	aa_ref_seq=M	codon_new_seq=GTG	codon_position=1	codon_ref_seq=TTG	gene_list=ECB_01628	gene_name=ECB_01628	gene_position=28	gene_product=predicted transporter	gene_strand=<	locus_tag=ECB_01628	snp_type=synonymous
SNP	1714	807	REL606	1732027	C	gene_name=ydhY/ydhZ	gene_position=intergenic (-283/+172)	gene_product=predicted 4Fe-4S ferridoxin-type protein/hypothetical protein	locus_tag=ECB_01643/ECB_01644	snp_type=intergenic
SNP	1715	808	REL606	1732450	C	gene_name=ydhZ/pykF	gene_position=intergenic (-42/-515)	gene_product=hypothetical protein/pyruvate kinase	locus_tag=ECB_01644/ECB_01645	snp_type=intergenic
MOB	1489	13,17	REL606	1733647	IS150	-1	3	gene_list=pykF	gene_name=pykF	gene_position=coding (683-685/1413 nt)	gene_product=pyruvate kinase	gene_strand=>	locus_tag=ECB_01645
SNP	1716	809	REL606	1738400	C	aa_new_seq=C	aa_position=220	aa_ref_seq=F	codon_new_seq=TGT	codon_position=2	codon_ref_seq=TTT	gene_list=sufD	gene_name=sufD	gene_position=659	gene_product=component of SufBCD complex	gene_strand=<	locus_tag=ECB_01650	snp_type=nonsynonymous
SNP	1717	810	REL606	1756840	C	gene_name=ydiP/ydiQ	gene_position=intergenic (-271/-45)	gene_product=predicted DNA-binding transcriptional regulator/hypothetical protein	locus_tag=ECB_01665/ECB_01666	snp_type=intergenic
SNP	1718	811	REL606	1759732	G	aa_new_seq=G	aa_position=357	aa_ref_seq=V	codon_new_seq=GGT	codon_position=2	codon_ref_seq=GTT	gene_list=ydiS	gene_name=ydiS	gene_position=1070	gene_product=predicted oxidoreductase with FAD/NAD(P)-binding domain	gene_strand=>	locus_tag=ECB_01668	snp_type=nonsynonymous
SNP	1719	812	REL606	1761548	C	aa_new_seq=A	aa_position=435	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=ydiD	gene_name=ydiD	gene_position=1304	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01670	snp_type=nonsynonymous
DEL	1720	813	REL606	1764955	1	gene_list=ydiA	gene_name=ydiA	gene_position=coding (243/834 nt)	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01672
SNP	1721	814	REL606	1767478	G	aa_new_seq=L	aa_position=345	aa_ref_seq=L	codon_new_seq=CTC	codon_position=3	codon_ref_seq=CTA	gene_list=ydiU	gene_name=ydiU	gene_position=1035	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_01675	snp_type=synonymous
SNP	1722	815	REL606	1785895	G	aa_new_seq=A	aa_position=279	aa_ref_seq=S	codon_new_seq=GCA	codon_position=1	codon_ref_seq=TCA	gene_list=yniA	gene_name=yniA	gene_position=835	gene_product=predicted phosphotransferase/kinase	gene_strand=>	locus_tag=ECB_01694	snp_type=nonsynonymous
SNP	1723	816	REL606	1786512	G	gene_name=yniB/yniC	gene_position=intergenic (-14/-133)	gene_product=predicted inner membrane protein/predicted hydrolase	locus_tag=ECB_01695/ECB_01696	snp_type=intergenic
SNP	1724	817	REL606	1790190	G	aa_new_seq=Q	aa_position=74	aa_ref_seq=K	codon_new_seq=CAG	codon_position=1	codon_ref_seq=AAG	gene_list=ydjO	gene_name=ydjO	gene_position=220	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_01699	snp_type=nonsynonymous
SNP	1725	818	REL606	1794984	G	aa_new_seq=S	aa_position=261	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=celF	gene_name=celF	gene_position=782	gene_product=cryptic phospho-beta-glucosidase, NAD(P)-binding	gene_strand=<	locus_tag=ECB_01703	snp_type=nonsynonymous
SNP	1726	819	REL606	1795074	G	aa_new_seq=T	aa_position=231	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=celF	gene_name=celF	gene_position=692	gene_product=cryptic phospho-beta-glucosidase, NAD(P)-binding	gene_strand=<	locus_tag=ECB_01703	snp_type=nonsynonymous
SNP	1727	820	REL606	1803438	C	aa_new_seq=D	aa_position=251	aa_ref_seq=Y	codon_new_seq=GAT	codon_position=1	codon_ref_seq=TAT	gene_list=astE	gene_name=astE	gene_position=751	gene_product=succinylglutamate desuccinylase	gene_strand=<	locus_tag=ECB_01713	snp_type=nonsynonymous
SNP	1728	821	REL606	1806589	A	aa_new_seq=V	aa_position=137	aa_ref_seq=V	codon_new_seq=GTT	codon_position=3	codon_ref_seq=GTG	gene_list=astD	gene_name=astD	gene_position=411	gene_product=succinylglutamic semialdehyde dehydrogenase	gene_strand=<	locus_tag=ECB_01715	snp_type=synonymous
MOB	1490	10,7	REL606	1821525	IS150	-1	3	gene_list=ynjI	gene_name=ynjI	gene_position=coding (573-575/1041 nt)	gene_product=predicted inner membrane protein	gene_strand=<	locus_tag=ECB_01731
SNP	1729	822	REL606	1826639	G	aa_new_seq=W	aa_position=192	aa_ref_seq=L	codon_new_seq=TGG	codon_position=2	codon_ref_seq=TTG	gene_list=sppA	gene_name=sppA	gene_position=575	gene_product=protease IV (signal peptide peptidase)	gene_strand=>	locus_tag=ECB_01735	snp_type=nonsynonymous
SNP	1730	823	REL606	1829798	C	gene_name=pncA/ydjE	gene_position=intergenic (+42/+51)	gene_product=nicotinamidase/pyrazinamidase/predicted transporter	locus_tag=ECB_01737/ECB_01738	snp_type=intergenic
SNP	1731	824	REL606	1834004	C	aa_new_seq=A	aa_position=52	aa_ref_seq=S	codon_new_seq=GCT	codon_position=1	codon_ref_seq=TCT	gene_list=ydjH	gene_name=ydjH	gene_position=154	gene_product=predicted kinase	gene_strand=<	locus_tag=ECB_01741	snp_type=nonsynonymous
SNP	1732	825	REL606	1840904	C	aa_new_seq=T	aa_position=302	aa_ref_seq=N	codon_new_seq=ACC	codon_position=2	codon_ref_seq=AAC	gene_list=gapA	gene_name=gapA	gene_position=905	gene_product=glyceraldehyde-3-phosphate dehydrogenase	gene_strand=>	locus_tag=ECB_01748	snp_type=nonsynonymous
SNP	1733	827	REL606	1880102	C	aa_new_seq=M	aa_position=21	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=yoaE	gene_name=yoaE	gene_position=63	gene_product=fused predicted membrane protein/conserved protein	gene_strand=<	locus_tag=ECB_01786	snp_type=nonsynonymous
SNP	1734	828	REL606	1886192	C	gene_name=yobF/yebO	gene_position=intergenic (-22/+647)	gene_product=hypothetical protein/hypothetical protein	locus_tag=ECB_01794/ECB_01795	snp_type=intergenic
SNP	1735	829	REL606	1886806	G	gene_name=yobF/yebO	gene_position=intergenic (-636/+33)	gene_product=hypothetical protein/hypothetical protein	locus_tag=ECB_01794/ECB_01795	snp_type=intergenic
SNP	1736	830	REL606	1902366	G	aa_new_seq=Q	aa_position=268	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=yebZ	gene_name=yebZ	gene_position=802	gene_product=predicted inner membrane protein	gene_strand=<	locus_tag=ECB_01811	snp_type=nonsynonymous
SNP	1737	831	REL606	1902841	C	aa_new_seq=L	aa_position=109	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=yebZ	gene_name=yebZ	gene_position=327	gene_product=predicted inner membrane protein	gene_strand=<	locus_tag=ECB_01811	snp_type=synonymous
SNP	1738	832	REL606	1904444	G	aa_new_seq=L	aa_position=143	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=yobB	gene_name=yobB	gene_position=429	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01814	snp_type=nonsynonymous
SNP	1739	833	REL606	1905858	C	aa_new_seq=D	aa_position=520	aa_ref_seq=Y	codon_new_seq=GAT	codon_position=1	codon_ref_seq=TAT	gene_list=ptrB	gene_name=ptrB	gene_position=1558	gene_product=protease II	gene_strand=<	locus_tag=ECB_01816	snp_type=nonsynonymous
SNP	1740	834	REL606	1909010	C	gene_name=yebF/yebG	gene_position=intergenic (-32/+23)	gene_product=hypothetical protein/conserved protein regulated by LexA	locus_tag=ECB_01818/ECB_01819	snp_type=intergenic
SNP	1741	835	REL606	1913540	C	aa_new_seq=A	aa_position=451	aa_ref_seq=S	codon_new_seq=GCC	codon_position=1	codon_ref_seq=TCC	gene_list=zwf	gene_name=zwf	gene_position=1351	gene_product=glucose-6-phosphate 1-dehydrogenase	gene_strand=<	locus_tag=ECB_01823	snp_type=nonsynonymous
SNP	1742	836	REL606	1921783	G	aa_new_seq=Q	aa_position=182	aa_ref_seq=H	codon_new_seq=CAG	codon_position=3	codon_ref_seq=CAT	gene_list=znuC	gene_name=znuC	gene_position=546	gene_product=high-affinity zinc transporter ATPase	gene_strand=>	locus_tag=ECB_01829	snp_type=nonsynonymous
SNP	1743	837	REL606	1936330	C	aa_new_seq=T	aa_position=191	aa_ref_seq=T	codon_new_seq=ACG	codon_position=3	codon_ref_seq=ACT	gene_list=torY	gene_name=torY	gene_position=573	gene_product=TMAO reductase III (TorYZ), cytochrome c-type subunit	gene_strand=<	locus_tag=ECB_01844	snp_type=synonymous
SNP	1744	838	REL606	1936718	G	aa_new_seq=T	aa_position=62	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=torY	gene_name=torY	gene_position=185	gene_product=TMAO reductase III (TorYZ), cytochrome c-type subunit	gene_strand=<	locus_tag=ECB_01844	snp_type=nonsynonymous
SNP	1745	839	REL606	1952123	G	gene_name=cheW/cheA	gene_position=intergenic (-14/+7)	gene_product=purine-binding chemotaxis protein/fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein	locus_tag=ECB_01858/ECB_01859	snp_type=intergenic
SNP	1746	840	REL606	1966410	A	aa_new_seq=G	aa_position=65	aa_ref_seq=G	codon_new_seq=GGA	codon_position=3	codon_ref_seq=GGC	gene_list=yecR	gene_name=yecR	gene_position=195	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01872	snp_type=synonymous
SNP	1747	842	REL606	1972086	G	aa_new_seq=P	aa_position=183	aa_ref_seq=Q	codon_new_seq=CCG	codon_position=2	codon_ref_seq=CAG	gene_list=uvrC	gene_name=uvrC	gene_position=548	gene_product=excinuclease ABC subunit C	gene_strand=<	locus_tag=ECB_01878	snp_type=nonsynonymous
SNP	1748	843	REL606	1972702	C	aa_new_seq=R	aa_position=168	aa_ref_seq=S	codon_new_seq=AGG	codon_position=3	codon_ref_seq=AGT	gene_list=uvrY	gene_name=uvrY	gene_position=504	gene_product=response regulator	gene_strand=<	locus_tag=ECB_01879	snp_type=nonsynonymous
SNP	1749	846	REL606	1975162	G	aa_new_seq=N	aa_position=330	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=yedV	gene_name=yedV	gene_position=990	gene_product=predicted sensory kinase in two-component regulatory system with YedW	gene_strand=<	locus_tag=ECB_01883	snp_type=nonsynonymous
SNP	1750	847	REL606	1976879	G	gene_name=yedW/yedX	gene_position=intergenic (-57/-76)	gene_product=predicted DNA-binding response regulator in two-component system with YedV/hypothetical protein	locus_tag=ECB_01884/ECB_01885	snp_type=intergenic
SNP	1751	848	REL606	1977296	G	aa_new_seq=K	aa_position=114	aa_ref_seq=N	codon_new_seq=AAG	codon_position=3	codon_ref_seq=AAT	gene_list=yedX	gene_name=yedX	gene_position=342	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_01885	snp_type=nonsynonymous
SNP	1752	850	REL606	1987874	G	aa_new_seq=K	aa_position=1671	aa_ref_seq=N	codon_new_seq=AAG	codon_position=3	codon_ref_seq=AAT	gene_list=yeeJ	gene_name=yeeJ	gene_position=5013	gene_product=adhesin	gene_strand=>	locus_tag=ECB_01891	snp_type=nonsynonymous
SNP	1753	851	REL606	1993134	C	aa_new_seq=V	aa_position=25	aa_ref_seq=V	codon_new_seq=GTC	codon_position=3	codon_ref_seq=GTA	gene_list=amn	gene_name=amn	gene_position=75	gene_product=AMP nucleosidase	gene_strand=>	locus_tag=ECB_01894	snp_type=synonymous
SNP	1754	854	REL606	1998375	G	aa_new_seq=H	aa_position=180	aa_ref_seq=Q	codon_new_seq=CAC	codon_position=3	codon_ref_seq=CAA	gene_list=cbl	gene_name=cbl	gene_position=540	gene_product=DNA-binding transcriptional activator of cysteine biosynthesis	gene_strand=<	locus_tag=ECB_01897	snp_type=nonsynonymous
SNP	1755	855	REL606	1998939	G	gene_name=cbl/nac	gene_position=intergenic (-25/+77)	gene_product=DNA-binding transcriptional activator of cysteine biosynthesis/DNA-binding transcriptional dual regulator of nitrogen assimilation	locus_tag=ECB_01897/ECB_01898	snp_type=intergenic
SNP	1756	857	REL606	2002639	C	aa_new_seq=*	aa_position=195	aa_ref_seq=L	codon_new_seq=TGA	codon_position=2	codon_ref_seq=TTA	gene_list=cobS	gene_name=cobS	gene_position=584	gene_product=cobalamin synthase	gene_strand=<	locus_tag=ECB_01901	snp_type=nonsynonymous
SNP	1757	858	REL606	2018771	C	aa_new_seq=E	aa_position=267	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=yeeZ	gene_name=yeeZ	gene_position=801	gene_product=predicted epimerase, with NAD(P)-binding Rossmann-fold domain	gene_strand=<	locus_tag=ECB_01919	snp_type=nonsynonymous
SNP	1758	859	REL606	2028307	G	gene_name=wzzB/ugd	gene_position=intergenic (-1/+142)	gene_product=regulator of length of O-antigen component of lipopolysaccharide chains/UDP-glucose 6-dehydrogenase	locus_tag=ECB_01929/ECB_01930	snp_type=intergenic
SNP	1759	880	REL606	2061256	G	aa_new_seq=A	aa_position=88	aa_ref_seq=A	codon_new_seq=GCC	codon_position=3	codon_ref_seq=GCA	gene_list=gmd	gene_name=gmd	gene_position=264	gene_product=GDP-D-mannose dehydratase, NAD(P)-binding	gene_strand=<	locus_tag=ECB_01959	snp_type=synonymous
SNP	1760	881	REL606	2075227	C	aa_new_seq=L	aa_position=65	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=dcd	gene_name=dcd	gene_position=195	gene_product=deoxycytidine triphosphate deaminase	gene_strand=<	locus_tag=ECB_01971	snp_type=synonymous
SNP	1761	882	REL606	2081023	C	aa_new_seq=A	aa_position=55	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=yegD	gene_name=yegD	gene_position=164	gene_product=predicted chaperone	gene_strand=>	locus_tag=ECB_01975	snp_type=nonsynonymous
SNP	1762	883	REL606	2082685	A	aa_new_seq=V	aa_position=494	aa_ref_seq=A	codon_new_seq=GTT	codon_position=2	codon_ref_seq=GCT	gene_list=yegI	gene_name=yegI	gene_position=1481	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_01976	snp_type=nonsynonymous
SNP	1763	884	REL606	2083757	T	aa_new_seq=N	aa_position=137	aa_ref_seq=H	codon_new_seq=AAC	codon_position=1	codon_ref_seq=CAC	gene_list=yegI	gene_name=yegI	gene_position=409	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_01976	snp_type=nonsynonymous
SNP	1764	888	REL606	2086607	G	gene_name=yegL/yegM	gene_position=intergenic (-1028/-517)	gene_product=hypothetical protein/multidrug efflux system, subunit A	locus_tag=ECB_01978/ECB_01979	snp_type=intergenic
SNP	1765	902	REL606	2127664	C	aa_new_seq=S	aa_position=88	aa_ref_seq=I	codon_new_seq=AGT	codon_position=2	codon_ref_seq=ATT	gene_list=gatB	gene_name=gatB	gene_position=263	gene_product=galactitol-specific enzyme IIB component of PTS	gene_strand=<	locus_tag=ECB_02019	snp_type=nonsynonymous
DEL	1485	904,27	REL606	2129368	8043	gene_name=[gatZ]–[yegX]	gene_product=[gatZ], gatY, fbaB, yegT, yegU, yegV, yegW, [yegX]	locus_tag=[ECB_02021]–[ECB_02030]	mediated=IS1
SNP	1766	907	REL606	2145923	C	aa_new_seq=Q	aa_position=143	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=metG	gene_name=metG	gene_position=427	gene_product=methionyl-tRNA synthetase	gene_strand=>	locus_tag=ECB_02044	snp_type=nonsynonymous
SNP	1767	908	REL606	2159082	C	aa_new_seq=P	aa_position=731	aa_ref_seq=H	codon_new_seq=CCT	codon_position=2	codon_ref_seq=CAT	gene_list=yehM	gene_name=yehM	gene_position=2192	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_02049	snp_type=nonsynonymous
SNP	1768	909	REL606	2165584	T	aa_new_seq=V	aa_position=86	aa_ref_seq=V	codon_new_seq=GTA	codon_position=3	codon_ref_seq=GTC	gene_list=yehU	gene_name=yehU	gene_position=258	gene_product=predicted sensory kinase in two-component system with YehT	gene_strand=<	locus_tag=ECB_02055	snp_type=synonymous
SNP	1769	913	REL606	2181209	G	aa_new_seq=T	aa_position=139	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=yohI	gene_name=yohI	gene_position=416	gene_product=tRNA-dihydrouridine synthase C	gene_strand=<	locus_tag=ECB_02069	snp_type=nonsynonymous
SNP	1770	914	REL606	2183839	C	aa_new_seq=A	aa_position=253	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=cdd	gene_name=cdd	gene_position=758	gene_product=cytidine deaminase	gene_strand=>	locus_tag=ECB_02072	snp_type=nonsynonymous
SNP	1771	915	REL606	2201029	G	aa_new_seq=V	aa_position=25	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=yeiH	gene_name=yeiH	gene_position=75	gene_product=conserved inner membrane protein	gene_strand=>	locus_tag=ECB_02087	snp_type=synonymous
SNP	1772	916	REL606	2201070	G	aa_new_seq=G	aa_position=39	aa_ref_seq=V	codon_new_seq=GGT	codon_position=2	codon_ref_seq=GTT	gene_list=yeiH	gene_name=yeiH	gene_position=116	gene_product=conserved inner membrane protein	gene_strand=>	locus_tag=ECB_02087	snp_type=nonsynonymous
SNP	1773	917	REL606	2204048	G	gene_name=yeiI/yeiJ	gene_position=intergenic (+22/+34)	gene_product=predicted kinase/predicted nucleoside transporter	locus_tag=ECB_02089/ECB_02090	snp_type=intergenic
SNP	1774	918	REL606	2222411	G	aa_new_seq=K	aa_position=166	aa_ref_seq=N	codon_new_seq=AAG	codon_position=3	codon_ref_seq=AAT	gene_list=rtn	gene_name=rtn	gene_position=498	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_02106	snp_type=nonsynonymous
SNP	1775	919	REL606	2226691	G	aa_new_seq=E	aa_position=77	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=yejE	gene_name=yejE	gene_position=231	gene_product=predicted oligopeptide transporter subunit	gene_strand=>	locus_tag=ECB_02109	snp_type=nonsynonymous
SNP	1776	920	REL606	2226991	C	aa_new_seq=H	aa_position=177	aa_ref_seq=Q	codon_new_seq=CAC	codon_position=3	codon_ref_seq=CAA	gene_list=yejE	gene_name=yejE	gene_position=531	gene_product=predicted oligopeptide transporter subunit	gene_strand=>	locus_tag=ECB_02109	snp_type=nonsynonymous
SNP	1777	921	REL606	2234717	G	aa_new_seq=S	aa_position=140	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=yejK	gene_name=yejK	gene_position=419	gene_product=nucleoid-associated protein NdpA	gene_strand=<	locus_tag=ECB_02116	snp_type=nonsynonymous
SNP	1778	922	REL606	2237327	C	gene_name=yejM/proL	gene_position=intergenic (+3/-72)	gene_product=predicted hydrolase, inner membrane/tRNA-Pro	locus_tag=ECB_02118/ECB_t00037	snp_type=intergenic
SNP	1779	923	REL606	2251433	G	aa_new_seq=T	aa_position=437	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=napA	gene_name=napA	gene_position=1310	gene_product=nitrate reductase, periplasmic, large subunit	gene_strand=<	locus_tag=ECB_02133	snp_type=nonsynonymous
SNP	1780	928	REL606	2258360	C	aa_new_seq=M	aa_position=120	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=yojI	gene_name=yojI	gene_position=360	gene_product=fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component	gene_strand=<	locus_tag=ECB_02138	snp_type=nonsynonymous
SNP	1781	929	REL606	2260637	C	aa_new_seq=L	aa_position=334	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=yojL	gene_name=yojL	gene_position=1002	gene_product=predicted thiamine biosynthesis lipoprotein	gene_strand=<	locus_tag=ECB_02141	snp_type=nonsynonymous
SNP	1782	932	REL606	2266908	C	aa_new_seq=H	aa_position=56	aa_ref_seq=N	codon_new_seq=CAC	codon_position=1	codon_ref_seq=AAC	gene_list=atoS	gene_name=atoS	gene_position=166	gene_product=sensory histidine kinase in two-component regulatory system with AtoC	gene_strand=>	locus_tag=ECB_02146	snp_type=nonsynonymous
SNP	1783	933	REL606	2285933	G	aa_new_seq=S	aa_position=63	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=gyrA	gene_name=gyrA	gene_position=188	gene_product=DNA gyrase subunit A	gene_strand=<	locus_tag=ECB_02157	snp_type=nonsynonymous
SNP	1784	934	REL606	2290343	G	aa_new_seq=S	aa_position=176	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=yfaL	gene_name=yfaL	gene_position=527	gene_product=adhesin	gene_strand=<	locus_tag=ECB_02159	snp_type=nonsynonymous
SNP	1785	935	REL606	2303128	G	aa_new_seq=Q	aa_position=300	aa_ref_seq=H	codon_new_seq=CAG	codon_position=3	codon_ref_seq=CAT	gene_list=glpC	gene_name=glpC	gene_position=900	gene_product=sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit	gene_strand=>	locus_tag=ECB_02169	snp_type=nonsynonymous
SNP	1786	936	REL606	2318103	C	aa_new_seq=P	aa_position=228	aa_ref_seq=Q	codon_new_seq=CCG	codon_position=2	codon_ref_seq=CAG	gene_list=arnT	gene_name=arnT	gene_position=683	gene_product=4-amino-4-deoxy-L-arabinose transferase	gene_strand=>	locus_tag=ECB_02183	snp_type=nonsynonymous
SNP	1787	937	REL606	2320133	C	gene_name=pmrD/menE	gene_position=intergenic (-82/+28)	gene_product=polymyxin resistance protein B/O-succinylbenzoic acid-CoA ligase	locus_tag=ECB_02186/ECB_02187	snp_type=intergenic
MOB	1491	20,24	REL606	2322340	IS186	-1	7	gene_list=menC	gene_name=menC	gene_position=coding (130-136/963 nt)	gene_product=O-succinylbenzoate synthase	gene_strand=<	locus_tag=ECB_02188
SNP	1788	938	REL606	2323662	C	aa_new_seq=*	aa_position=148	aa_ref_seq=Y	codon_new_seq=TAG	codon_position=3	codon_ref_seq=TAT	gene_list=yfbB	gene_name=yfbB	gene_position=444	gene_product=predicted peptidase	gene_strand=<	locus_tag=ECB_02190	snp_type=nonsynonymous
SNP	1789	939	REL606	2333346	C	aa_new_seq=Q	aa_position=228	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=ECB_02200	gene_name=ECB_02200	gene_position=682	gene_product=YadA protein	gene_strand=>	locus_tag=ECB_02200	snp_type=nonsynonymous
SNP	1790	940	REL606	2335296	G	aa_new_seq=L	aa_position=424	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=nuoM	gene_name=nuoM	gene_position=1270	gene_product=NADH dehydrogenase subunit M	gene_strand=<	locus_tag=ECB_02202	snp_type=nonsynonymous
SNP	1791	941	REL606	2341199	G	aa_new_seq=T	aa_position=855	aa_ref_seq=N	codon_new_seq=ACC	codon_position=2	codon_ref_seq=AAC	gene_list=nuoG	gene_name=nuoG	gene_position=2564	gene_product=NADH dehydrogenase subunit G	gene_strand=<	locus_tag=ECB_02208	snp_type=nonsynonymous
SNP	1792	942	REL606	2360181	C	aa_new_seq=Q	aa_position=615	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=pta	gene_name=pta	gene_position=1843	gene_product=phosphate acetyltransferase	gene_strand=>	locus_tag=ECB_02222	snp_type=nonsynonymous
SNP	1793	943	REL606	2361786	C	aa_new_seq=H	aa_position=372	aa_ref_seq=N	codon_new_seq=CAT	codon_position=1	codon_ref_seq=AAT	gene_list=yfcC	gene_name=yfcC	gene_position=1114	gene_product=predicted inner membrane protein	gene_strand=>	locus_tag=ECB_02223	snp_type=nonsynonymous
SNP	1794	944	REL606	2363106	G	aa_new_seq=P	aa_position=92	aa_ref_seq=Q	codon_new_seq=CCA	codon_position=2	codon_ref_seq=CAA	gene_list=yfcE	gene_name=yfcE	gene_position=275	gene_product=phosphodiesterase	gene_strand=<	locus_tag=ECB_02225	snp_type=nonsynonymous
SNP	1795	945	REL606	2368152	G	aa_new_seq=A	aa_position=225	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=hisM	gene_name=hisM	gene_position=674	gene_product=histidine/lysine/arginine/ornithine transporter subunit	gene_strand=<	locus_tag=ECB_02232	snp_type=nonsynonymous
SNP	1796	946	REL606	2377269	G	aa_new_seq=Q	aa_position=84	aa_ref_seq=K	codon_new_seq=CAG	codon_position=1	codon_ref_seq=AAG	gene_list=accD	gene_name=accD	gene_position=250	gene_product=acetyl-CoA carboxylase subunit beta	gene_strand=<	locus_tag=ECB_02241	snp_type=nonsynonymous
SNP	1797	947	REL606	2387080	C	aa_new_seq=P	aa_position=575	aa_ref_seq=P	codon_new_seq=CCC	codon_position=3	codon_ref_seq=CCA	gene_list=yfcK	gene_name=yfcK	gene_position=1725	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_02249	snp_type=synonymous
SNP	1798	949	REL606	2412193	T	aa_new_seq=V	aa_position=40	aa_ref_seq=V	codon_new_seq=GTT	codon_position=3	codon_ref_seq=GTG	gene_list=dsdX	gene_name=dsdX	gene_position=120	gene_product=predicted transporter	gene_strand=>	locus_tag=ECB_02275	snp_type=synonymous
SNP	1799	950	REL606	2422436	G	aa_new_seq=F	aa_position=320	aa_ref_seq=L	codon_new_seq=TTC	codon_position=3	codon_ref_seq=TTA	gene_list=yfdE	gene_name=yfdE	gene_position=960	gene_product=predicted CoA-transferase, NAD(P)-binding	gene_strand=<	locus_tag=ECB_02281	snp_type=nonsynonymous
SNP	1800	951	REL606	2426725	C	aa_new_seq=G	aa_position=253	aa_ref_seq=W	codon_new_seq=GGG	codon_position=1	codon_ref_seq=TGG	gene_list=yfdW	gene_name=yfdW	gene_position=757	gene_product=formyl-coenzyme A transferase	gene_strand=<	locus_tag=ECB_02284	snp_type=nonsynonymous
SNP	1801	952	REL606	2439538	G	aa_new_seq=L	aa_position=79	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=ypdE	gene_name=ypdE	gene_position=235	gene_product=predicted peptidase	gene_strand=<	locus_tag=ECB_02294	snp_type=nonsynonymous
SNP	1802	953	REL606	2441230	C	aa_new_seq=S	aa_position=297	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=ypdG	gene_name=ypdG	gene_position=890	gene_product=predicted enzyme IIC component of PTS	gene_strand=<	locus_tag=ECB_02296	snp_type=nonsynonymous
SNP	1803	955	REL606	2446990	G	gene_name=mntH/nupC	gene_position=intergenic (-59/-277)	gene_product=manganese transport protein MntH/nucleoside (except guanosine) transporter	locus_tag=ECB_02301/ECB_02302	snp_type=intergenic
MOB	1492	16,18	REL606	2448493	IS186	1	6	gene_name=nupC/yfeA	gene_position=intergenic (+24/+21)	gene_product=nucleoside (except guanosine) transporter/predicted diguanylate cyclase	locus_tag=ECB_02302/ECB_02303	snp_type=intergenic
SNP	1804	964	REL606	2465005	C	aa_new_seq=A	aa_position=149	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=crr	gene_name=crr	gene_position=446	gene_product=glucose-specific PTS system enzyme IIA component	gene_strand=>	locus_tag=ECB_02317	snp_type=nonsynonymous
SNP	1805	965	REL606	2474580	C	aa_new_seq=S	aa_position=22	aa_ref_seq=S	codon_new_seq=TCC	codon_position=3	codon_ref_seq=TCA	gene_list=yfeU	gene_name=yfeU	gene_position=66	gene_product=N-acetylmuramic acid-6-phosphate etherase	gene_strand=>	locus_tag=ECB_02328	snp_type=synonymous
SNP	1806	966	REL606	2480430	C	aa_new_seq=P	aa_position=187	aa_ref_seq=Q	codon_new_seq=CCA	codon_position=2	codon_ref_seq=CAA	gene_list=amiA	gene_name=amiA	gene_position=560	gene_product=N-acetylmuramoyl-l-alanine amidase I	gene_strand=>	locus_tag=ECB_02335	snp_type=nonsynonymous
SNP	1807	967	REL606	2484188	G	aa_new_seq=A	aa_position=210	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=eutC	gene_name=eutC	gene_position=629	gene_product=ethanolamine ammonia-lyase small subunit	gene_strand=<	locus_tag=ECB_02340	snp_type=nonsynonymous
SNP	1808	970	REL606	2489436	C	aa_new_seq=W	aa_position=302	aa_ref_seq=L	codon_new_seq=TGG	codon_position=2	codon_ref_seq=TTG	gene_list=eutG	gene_name=eutG	gene_position=905	gene_product=predicted alcohol dehydrogenase in ethanolamine utilization	gene_strand=<	locus_tag=ECB_02344	snp_type=nonsynonymous
SNP	1809	971	REL606	2494611	C	aa_new_seq=A	aa_position=175	aa_ref_seq=S	codon_new_seq=GCT	codon_position=1	codon_ref_seq=TCT	gene_list=eutT	gene_name=eutT	gene_position=523	gene_product=predicted cobalamin adenosyltransferase in ethanolamine utilization	gene_strand=<	locus_tag=ECB_02350	snp_type=nonsynonymous
SNP	1810	972	REL606	2497928	G	aa_new_seq=N	aa_position=426	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=maeB	gene_name=maeB	gene_position=1278	gene_product=malic enzyme	gene_strand=<	locus_tag=ECB_02354	snp_type=nonsynonymous
SNP	1811	973	REL606	2499945	C	aa_new_seq=T	aa_position=151	aa_ref_seq=N	codon_new_seq=ACC	codon_position=2	codon_ref_seq=AAC	gene_list=talA	gene_name=talA	gene_position=452	gene_product=transaldolase A	gene_strand=>	locus_tag=ECB_02355	snp_type=nonsynonymous
SNP	1812	976	REL606	2503021	T	aa_new_seq=L	aa_position=195	aa_ref_seq=L	codon_new_seq=CTA	codon_position=3	codon_ref_seq=CTC	gene_list=ypfG	gene_name=ypfG	gene_position=585	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02357	snp_type=synonymous
SNP	1813	977	REL606	2510826	G	aa_new_seq=V	aa_position=802	aa_ref_seq=F	codon_new_seq=GTC	codon_position=1	codon_ref_seq=TTC	gene_list=acrD	gene_name=acrD	gene_position=2404	gene_product=aminoglycoside/multidrug efflux system	gene_strand=>	locus_tag=ECB_02361	snp_type=nonsynonymous
SNP	1814	978	REL606	2511681	G	gene_name=acrD/yffB	gene_position=intergenic (+145/-394)	gene_product=aminoglycoside/multidrug efflux system/hypothetical protein	locus_tag=ECB_02361/ECB_02362	snp_type=intergenic
SNP	1815	979	REL606	2520902	G	aa_new_seq=A	aa_position=57	aa_ref_seq=S	codon_new_seq=GCA	codon_position=1	codon_ref_seq=TCA	gene_list=gcvR	gene_name=gcvR	gene_position=169	gene_product=DNA-binding transcriptional repressor, regulatory protein accessory to GcvA	gene_strand=>	locus_tag=ECB_02371	snp_type=nonsynonymous
SNP	1816	980	REL606	2527624	C	aa_new_seq=I	aa_position=179	aa_ref_seq=I	codon_new_seq=ATC	codon_position=3	codon_ref_seq=ATA	gene_list=hyfE	gene_name=hyfE	gene_position=537	gene_product=hydrogenase 4, membrane subunit	gene_strand=>	locus_tag=ECB_02377	snp_type=synonymous
SNP	1817	981	REL606	2537679	T	aa_new_seq=S	aa_position=256	aa_ref_seq=A	codon_new_seq=TCC	codon_position=1	codon_ref_seq=GCC	gene_list=yfgC	gene_name=yfgC	gene_position=766	gene_product=predicted peptidase	gene_strand=>	locus_tag=ECB_02386	snp_type=nonsynonymous
SNP	1818	982	REL606	2540745	C	aa_new_seq=G	aa_position=79	aa_ref_seq=V	codon_new_seq=GGA	codon_position=2	codon_ref_seq=GTA	gene_list=uraA	gene_name=uraA	gene_position=236	gene_product=uracil transporter	gene_strand=<	locus_tag=ECB_02389	snp_type=nonsynonymous
SNP	1819	985	REL606	2587662	C	aa_new_seq=G	aa_position=295	aa_ref_seq=V	codon_new_seq=GGG	codon_position=2	codon_ref_seq=GTG	gene_list=hcaT	gene_name=hcaT	gene_position=884	gene_product=predicted 3-phenylpropionic transporter	gene_strand=<	locus_tag=ECB_02428	snp_type=nonsynonymous
SNP	1820	987	REL606	2594015	C	aa_new_seq=Q	aa_position=15	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=yphA	gene_name=yphA	gene_position=43	gene_product=predicted inner membrane protein	gene_strand=>	locus_tag=ECB_02435	snp_type=nonsynonymous
SNP	1821	988	REL606	2594074	C	aa_new_seq=G	aa_position=34	aa_ref_seq=G	codon_new_seq=GGC	codon_position=3	codon_ref_seq=GGA	gene_list=yphA	gene_name=yphA	gene_position=102	gene_product=predicted inner membrane protein	gene_strand=>	locus_tag=ECB_02435	snp_type=synonymous
SNP	1822	990	REL606	2619549	C	aa_new_seq=G	aa_position=144	aa_ref_seq=V	codon_new_seq=GGC	codon_position=2	codon_ref_seq=GTC	gene_list=yfhB	gene_name=yfhB	gene_position=431	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02454	snp_type=nonsynonymous
SNP	1823	991	REL606	2625494	G	aa_new_seq=A	aa_position=21	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=rncS	gene_name=rncS	gene_position=62	gene_product=ribonuclease III	gene_strand=<	locus_tag=ECB_02461	snp_type=nonsynonymous
SNP	1824	992	REL606	2629329	T	aa_new_seq=S	aa_position=307	aa_ref_seq=R	codon_new_seq=AGC	codon_position=1	codon_ref_seq=CGC	gene_list=rseB	gene_name=rseB	gene_position=919	gene_product=periplasmic negative regulator of sigmaE	gene_strand=<	locus_tag=ECB_02465	snp_type=nonsynonymous
SNP	1825	993	REL606	2639091	G	aa_new_seq=H	aa_position=311	aa_ref_seq=N	codon_new_seq=CAC	codon_position=1	codon_ref_seq=AAC	gene_list=yfiF	gene_name=yfiF	gene_position=931	gene_product=predicted methyltransferase	gene_strand=<	locus_tag=ECB_02475	snp_type=nonsynonymous
SNP	1826	994	REL606	2641700	G	aa_new_seq=L	aa_position=85	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=yfiQ	gene_name=yfiQ	gene_position=255	gene_product=fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit	gene_strand=>	locus_tag=ECB_02478	snp_type=synonymous
SNP	1827	997	REL606	2657995	C	aa_new_seq=P	aa_position=148	aa_ref_seq=S	codon_new_seq=CCC	codon_position=1	codon_ref_seq=TCC	gene_list=yfiO	gene_name=yfiO	gene_position=442	gene_product=predicted lipoprotein	gene_strand=>	locus_tag=ECB_02485	snp_type=nonsynonymous
SNP	1828	998	REL606	2671458	C	aa_new_seq=G	aa_position=182	aa_ref_seq=G	codon_new_seq=GGG	codon_position=3	codon_ref_seq=GGT	gene_list=grpE	gene_name=grpE	gene_position=546	gene_product=heat shock protein	gene_strand=<	locus_tag=ECB_02502	snp_type=synonymous
SNP	1829	999	REL606	2677546	C	aa_new_seq=Q	aa_position=44	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=ECB_02509	gene_name=ECB_02509	gene_position=130	gene_product=Fels-2 prophage protein	gene_strand=>	locus_tag=ECB_02509	snp_type=nonsynonymous
SNP	1830	1002	REL606	2705690	C	aa_new_seq=A	aa_position=21	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=emrR	gene_name=emrR	gene_position=62	gene_product=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux	gene_strand=>	locus_tag=ECB_02539	snp_type=nonsynonymous
SNP	1831	1010	REL606	2732014	A	aa_new_seq=L	aa_position=91	aa_ref_seq=R	codon_new_seq=CTC	codon_position=2	codon_ref_seq=CGC	gene_list=hypF	gene_name=hypF	gene_position=272	gene_product=carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases	gene_strand=<	locus_tag=ECB_02562	snp_type=nonsynonymous
SNP	1832	1011	REL606	2740772	C	aa_new_seq=R	aa_position=187	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=hycE	gene_name=hycE	gene_position=560	gene_product=hydrogenase 3, large subunit	gene_strand=<	locus_tag=ECB_02571	snp_type=nonsynonymous
SNP	1833	1012	REL606	2745079	G	aa_new_seq=H	aa_position=73	aa_ref_seq=N	codon_new_seq=CAC	codon_position=1	codon_ref_seq=AAC	gene_list=hycA	gene_name=hycA	gene_position=217	gene_product=regulator of the transcriptional regulator FhlA	gene_strand=<	locus_tag=ECB_02575	snp_type=nonsynonymous
SNP	1834	1013	REL606	2754688	G	aa_new_seq=M	aa_position=23	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=pphB	gene_name=pphB	gene_position=69	gene_product=serine/threonine-specific protein phosphatase 2	gene_strand=>	locus_tag=ECB_02584	snp_type=nonsynonymous
SNP	1835	1014	REL606	2759524	C	aa_new_seq=A	aa_position=143	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=ygbM	gene_name=ygbM	gene_position=428	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_02589	snp_type=nonsynonymous
SNP	1836	1018	REL606	2784272	C	aa_new_seq=S	aa_position=3	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=ygcQ	gene_name=ygcQ	gene_position=8	gene_product=predicted flavoprotein	gene_strand=<	locus_tag=ECB_02614	snp_type=nonsynonymous
SNP	1837	1019	REL606	2790674	G	aa_new_seq=E	aa_position=93	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=ygcE	gene_name=ygcE	gene_position=279	gene_product=predicted kinase	gene_strand=>	locus_tag=ECB_02620	snp_type=nonsynonymous
SNP	1838	1022	REL606	2795341	G	aa_new_seq=V	aa_position=235	aa_ref_seq=F	codon_new_seq=GTT	codon_position=1	codon_ref_seq=TTT	gene_list=ygcG	gene_name=ygcG	gene_position=703	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_02623	snp_type=nonsynonymous
SNP	1839	1023	REL606	2799764	G	aa_new_seq=R	aa_position=86	aa_ref_seq=R	codon_new_seq=CGA	codon_position=1	codon_ref_seq=AGA	gene_list=chpA	gene_name=chpA	gene_position=256	gene_product=toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease	gene_strand=<	locus_tag=ECB_02627	snp_type=synonymous
SNP	1840	1024	REL606	2804425	G	aa_new_seq=R	aa_position=147	aa_ref_seq=S	codon_new_seq=AGG	codon_position=3	codon_ref_seq=AGT	gene_list=barA	gene_name=barA	gene_position=441	gene_product=hybrid sensory histidine kinase, in two-component regulatory system with UvrY	gene_strand=>	locus_tag=ECB_02631	snp_type=nonsynonymous
SNP	1841	1025	REL606	2804511	C	aa_new_seq=A	aa_position=176	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=barA	gene_name=barA	gene_position=527	gene_product=hybrid sensory histidine kinase, in two-component regulatory system with UvrY	gene_strand=>	locus_tag=ECB_02631	snp_type=nonsynonymous
SNP	1842	1026	REL606	2809503	G	aa_new_seq=A	aa_position=58	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=gudX	gene_name=gudX	gene_position=173	gene_product=predicted glucarate dehydratase	gene_strand=<	locus_tag=ECB_02633	snp_type=nonsynonymous
SNP	1843	1027	REL606	2812394	G	aa_new_seq=A	aa_position=107	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=yqcB	gene_name=yqcB	gene_position=320	gene_product=tRNA pseudouridine synthase	gene_strand=<	locus_tag=ECB_02636	snp_type=nonsynonymous
SNP	1844	1028	REL606	2817492	G	aa_new_seq=S	aa_position=112	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=sdaC	gene_name=sdaC	gene_position=335	gene_product=predicted serine transporter	gene_strand=>	locus_tag=ECB_02641	snp_type=nonsynonymous
SNP	1845	1030	REL606	2825941	C	aa_new_seq=R	aa_position=93	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=ECB_02649	gene_name=ECB_02649	gene_position=278	gene_product=protein similar to L-ribulokinase AraB	gene_strand=<	locus_tag=ECB_02649	snp_type=nonsynonymous
SNP	1846	1031	REL606	2832497	C	aa_new_seq=F	aa_position=147	aa_ref_seq=L	codon_new_seq=TTC	codon_position=3	codon_ref_seq=TTA	gene_list=fucK	gene_name=fucK	gene_position=441	gene_product=L-fuculokinase	gene_strand=>	locus_tag=ECB_02654	snp_type=nonsynonymous
SNP	1847	1032	REL606	2837626	G	aa_new_seq=P	aa_position=47	aa_ref_seq=T	codon_new_seq=CCC	codon_position=1	codon_ref_seq=ACC	gene_list=ygdI	gene_name=ygdI	gene_position=139	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02660	snp_type=nonsynonymous
SNP	1848	1033	REL606	2840075	C	aa_new_seq=M	aa_position=129	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=ygdL	gene_name=ygdL	gene_position=387	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02663	snp_type=nonsynonymous
SNP	1849	1038	REL606	2843663	C	gene_name=amiC/argA	gene_position=intergenic (-34/-198)	gene_product=N-acetylmuramoyl-L-alanine amidase/N-acetylglutamate synthase	locus_tag=ECB_02665/ECB_02666	snp_type=intergenic
SNP	1850	1039	REL606	2851294	C	aa_new_seq=G	aa_position=737	aa_ref_seq=V	codon_new_seq=GGA	codon_position=2	codon_ref_seq=GTA	gene_list=ptr	gene_name=ptr	gene_position=2210	gene_product=protease III	gene_strand=<	locus_tag=ECB_02669	snp_type=nonsynonymous
SNP	1851	1040	REL606	2853864	C	aa_new_seq=A	aa_position=1062	aa_ref_seq=S	codon_new_seq=GCC	codon_position=1	codon_ref_seq=TCC	gene_list=recC	gene_name=recC	gene_position=3184	gene_product=exonuclease V (RecBCD complex), gamma chain	gene_strand=<	locus_tag=ECB_02670	snp_type=nonsynonymous
SNP	1852	1041	REL606	2858322	G	aa_new_seq=A	aa_position=5	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=ppdB	gene_name=ppdB	gene_position=14	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02673	snp_type=nonsynonymous
SNP	1853	1042	REL606	2864911	A	aa_new_seq=G	aa_position=210	aa_ref_seq=G	codon_new_seq=GGA	codon_position=3	codon_ref_seq=GGC	gene_list=mutH	gene_name=mutH	gene_position=630	gene_product=DNA mismatch repair protein	gene_strand=>	locus_tag=ECB_02679	snp_type=synonymous
SNP	1854	1043	REL606	2868116	G	aa_new_seq=L	aa_position=123	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=ygeD	gene_name=ygeD	gene_position=367	gene_product=predicted inner membrane protein	gene_strand=<	locus_tag=ECB_02683	snp_type=nonsynonymous
SNP	1855	1044	REL606	2870517	G	aa_new_seq=L	aa_position=40	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=aas	gene_name=aas	gene_position=118	gene_product=2-acyl-glycerophospho-ethanolamine acyltransferase	gene_strand=<	locus_tag=ECB_02684	snp_type=nonsynonymous
SNP	1856	1045	REL606	2872152	G	aa_new_seq=P	aa_position=311	aa_ref_seq=P	codon_new_seq=CCG	codon_position=3	codon_ref_seq=CCT	gene_list=galR	gene_name=galR	gene_position=933	gene_product=DNA-binding transcriptional repressor	gene_strand=>	locus_tag=ECB_02685	snp_type=synonymous
SNP	1857	1047	REL606	2897800	G	aa_new_seq=M	aa_position=195	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=yqeA	gene_name=yqeA	gene_position=585	gene_product=predicted amino acid kinase	gene_strand=>	locus_tag=ECB_02707	snp_type=nonsynonymous
SNP	1858	1048	REL606	2909993	G	gene_name=xdhD/ygfO	gene_position=intergenic (+53/-112)	gene_product=fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit/Fe-S binding subunit/predicted transporter	locus_tag=ECB_02714/ECB_02715	snp_type=intergenic
SNP	1859	1049	REL606	2914384	T	aa_new_seq=D	aa_position=76	aa_ref_seq=A	codon_new_seq=GAC	codon_position=2	codon_ref_seq=GCC	gene_list=ygfS	gene_name=ygfS	gene_position=227	gene_product=predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit	gene_strand=<	locus_tag=ECB_02718	snp_type=nonsynonymous
SNP	1860	1050	REL606	2920951	G	aa_new_seq=A	aa_position=362	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=prfB	gene_name=prfB	gene_position=1085	gene_product=peptide chain release factor 2	gene_strand=<	locus_tag=ECB_02723	snp_type=nonsynonymous
SNP	1861	1051	REL606	2924475	C	aa_new_seq=S	aa_position=34	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=dsbC	gene_name=dsbC	gene_position=101	gene_product=protein disulfide isomerase II	gene_strand=<	locus_tag=ECB_02725	snp_type=nonsynonymous
SNP	1862	1052	REL606	2926721	C	aa_new_seq=V	aa_position=35	aa_ref_seq=L	codon_new_seq=GTA	codon_position=1	codon_ref_seq=TTA	gene_list=ygfY	gene_name=ygfY	gene_position=103	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02729	snp_type=nonsynonymous
SNP	1863	1053	REL606	2937857	C	aa_new_seq=R	aa_position=71	aa_ref_seq=L	codon_new_seq=CGC	codon_position=2	codon_ref_seq=CTC	gene_list=visC	gene_name=visC	gene_position=212	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02738	snp_type=nonsynonymous
SNP	1864	1054	REL606	2947175	C	aa_new_seq=A	aa_position=192	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=sbm	gene_name=sbm	gene_position=575	gene_product=methylmalonyl-CoA mutase	gene_strand=>	locus_tag=ECB_02748	snp_type=nonsynonymous
SNP	1865	1055	REL606	2948477	C	aa_new_seq=A	aa_position=626	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=sbm	gene_name=sbm	gene_position=1877	gene_product=methylmalonyl-CoA mutase	gene_strand=>	locus_tag=ECB_02748	snp_type=nonsynonymous
SNP	1866	1056	REL606	2955191	C	aa_new_seq=*	aa_position=123	aa_ref_seq=L	codon_new_seq=TGA	codon_position=2	codon_ref_seq=TTA	gene_list=yggB	gene_name=yggB	gene_position=368	gene_product=mechanosensitive channel	gene_strand=<	locus_tag=ECB_02755	snp_type=nonsynonymous
SNP	1867	1058	REL606	2988792	G	aa_new_seq=W	aa_position=40	aa_ref_seq=L	codon_new_seq=TGG	codon_position=2	codon_ref_seq=TTG	gene_list=mutY	gene_name=mutY	gene_position=119	gene_product=adenine DNA glycosylase	gene_strand=>	locus_tag=ECB_02791	snp_type=nonsynonymous
SNP	1868	1060	REL606	3006683	C	aa_new_seq=G	aa_position=231	aa_ref_seq=G	codon_new_seq=GGC	codon_position=3	codon_ref_seq=GGA	gene_list=yafZ	gene_name=yafZ	gene_position=693	gene_product=conserved protein	gene_strand=>	locus_tag=ECB_02803	snp_type=synonymous
MOB	1493	3,19	REL606	3015771	IS150	-1	4	gene_list=ECB_02816	gene_name=ECB_02816	gene_position=coding (1192-1195/1677 nt)	gene_product=KpsD protein	gene_strand=>	locus_tag=ECB_02816
SNP	1869	1064	REL606	3023893	G	gene_name=ECB_02822/insB-22	gene_position=intergenic (-171/+67)	gene_product=bifunctional Ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase/IS1 protein InsB	locus_tag=ECB_02822/ECB_02823	snp_type=intergenic
SNP	1870	1066	REL606	3027011	G	aa_new_seq=Y	aa_position=220	aa_ref_seq=*	codon_new_seq=TAC	codon_position=3	codon_ref_seq=TAA	gene_list=ECB_02827	gene_name=ECB_02827	gene_position=660	gene_product=Polysialic acid transport ATP-binding KpsT	gene_strand=<	locus_tag=ECB_02827	snp_type=nonsynonymous
SNP	1871	1067	REL606	3027683	C	gene_name=ECB_02827/ECB_02828	gene_position=intergenic (-13/+2)	gene_product=Polysialic acid transport ATP-binding KpsT/Polysialic acid transport protein kpsM	locus_tag=ECB_02827/ECB_02828	snp_type=intergenic
SNP	1872	1068	REL606	3040080	C	aa_new_seq=R	aa_position=111	aa_ref_seq=I	codon_new_seq=AGA	codon_position=2	codon_ref_seq=ATA	gene_list=yghG	gene_name=yghG	gene_position=332	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02840	snp_type=nonsynonymous
SNP	1873	1069	REL606	3041354	A	gene_name=pppA/yghJ	gene_position=intergenic (-68/+96)	gene_product=bifunctional prepilin leader peptidase/ methylase/predicted inner membrane lipoprotein	locus_tag=ECB_02841/ECB_02842	snp_type=intergenic
SNP	1874	1070	REL606	3043941	G	aa_new_seq=A	aa_position=688	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=yghJ	gene_name=yghJ	gene_position=2063	gene_product=predicted inner membrane lipoprotein	gene_strand=<	locus_tag=ECB_02842	snp_type=nonsynonymous
SNP	1875	1071	REL606	3045069	T	aa_new_seq=N	aa_position=312	aa_ref_seq=T	codon_new_seq=AAC	codon_position=2	codon_ref_seq=ACC	gene_list=yghJ	gene_name=yghJ	gene_position=935	gene_product=predicted inner membrane lipoprotein	gene_strand=<	locus_tag=ECB_02842	snp_type=nonsynonymous
SNP	1876	1072	REL606	3057690	C	aa_new_seq=D	aa_position=82	aa_ref_seq=E	codon_new_seq=GAC	codon_position=3	codon_ref_seq=GAA	gene_list=ECB_02851	gene_name=ECB_02851	gene_position=246	gene_product=putative saframycin Mx1 synthetase B	gene_strand=>	locus_tag=ECB_02851	snp_type=nonsynonymous
SNP	1877	1076	REL606	3084190	G	aa_new_seq=V	aa_position=119	aa_ref_seq=V	codon_new_seq=GTG	codon_position=3	codon_ref_seq=GTT	gene_list=yghA	gene_name=yghA	gene_position=357	gene_product=oxidoreductase	gene_strand=>	locus_tag=ECB_02878	snp_type=synonymous
SNP	1878	1077	REL606	3089831	C	aa_new_seq=T	aa_position=102	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=yqhD	gene_name=yqhD	gene_position=305	gene_product=alcohol dehydrogenase, NAD(P)-dependent	gene_strand=>	locus_tag=ECB_02884	snp_type=nonsynonymous
SNP	1879	1078	REL606	3093117	G	aa_new_seq=N	aa_position=734	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=ygiQ	gene_name=ygiQ	gene_position=2202	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02888	snp_type=nonsynonymous
SNP	1880	1079	REL606	3103672	A	aa_new_seq=T	aa_position=59	aa_ref_seq=T	codon_new_seq=ACT	codon_position=3	codon_ref_seq=ACC	gene_list=ygiW	gene_name=ygiW	gene_position=177	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_02896	snp_type=synonymous
SNP	1881	1080	REL606	3109306	G	aa_new_seq=A	aa_position=88	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=parE	gene_name=parE	gene_position=263	gene_product=DNA topoisomerase IV subunit B	gene_strand=<	locus_tag=ECB_02902	snp_type=nonsynonymous
SNP	1882	1081	REL606	3114886	G	aa_new_seq=*	aa_position=98	aa_ref_seq=Y	codon_new_seq=TAG	codon_position=3	codon_ref_seq=TAT	gene_list=ygiC	gene_name=ygiC	gene_position=294	gene_product=predicted enzyme	gene_strand=>	locus_tag=ECB_02910	snp_type=nonsynonymous
SNP	1883	1082	REL606	3116928	C	aa_new_seq=G	aa_position=69	aa_ref_seq=G	codon_new_seq=GGC	codon_position=3	codon_ref_seq=GGA	gene_list=ygiE	gene_name=ygiE	gene_position=207	gene_product=zinc transporter ZupT	gene_strand=>	locus_tag=ECB_02912	snp_type=synonymous
SNP	1884	1083	REL606	3121407	C	aa_new_seq=A	aa_position=392	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=yqiG	gene_name=yqiG	gene_position=1175	gene_product=predicted outer membrane usher protein	gene_strand=>	locus_tag=ECB_02916	snp_type=nonsynonymous
SNP	1885	1084	REL606	3123757	C	aa_new_seq=S	aa_position=97	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=yqiI	gene_name=yqiI	gene_position=290	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_02918	snp_type=nonsynonymous
SNP	1886	1085	REL606	3133535	G	aa_new_seq=R	aa_position=89	aa_ref_seq=S	codon_new_seq=CGC	codon_position=1	codon_ref_seq=AGC	gene_list=ygiF	gene_name=ygiF	gene_position=265	gene_product=predicted adenylate cyclase	gene_strand=<	locus_tag=ECB_02924	snp_type=nonsynonymous
SNP	1887	1086	REL606	3138764	C	aa_new_seq=V	aa_position=104	aa_ref_seq=F	codon_new_seq=GTT	codon_position=1	codon_ref_seq=TTT	gene_list=ygiP	gene_name=ygiP	gene_position=310	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=<	locus_tag=ECB_02930	snp_type=nonsynonymous
SNP	1888	1087	REL606	3155168	A	aa_new_seq=S	aa_position=296	aa_ref_seq=G	codon_new_seq=AGC	codon_position=1	codon_ref_seq=GGC	gene_list=ebgR	gene_name=ebgR	gene_position=886	gene_product=DNA-binding transcriptional repressor	gene_strand=>	locus_tag=ECB_02944	snp_type=nonsynonymous
SNP	1889	1088	REL606	3162213	C	aa_new_seq=A	aa_position=170	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=ygjK	gene_name=ygjK	gene_position=509	gene_product=predicted glycosyl hydrolase	gene_strand=>	locus_tag=ECB_02949	snp_type=nonsynonymous
SNP	1890	1089	REL606	3173835	G	aa_new_seq=E	aa_position=286	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=ygjU	gene_name=ygjU	gene_position=858	gene_product=sodium:serine/threonine symporter	gene_strand=>	locus_tag=ECB_02958	snp_type=nonsynonymous
SNP	1891	1090	REL606	3178868	C	aa_new_seq=T	aa_position=244	aa_ref_seq=N	codon_new_seq=ACT	codon_position=2	codon_ref_seq=AAT	gene_list=exuT	gene_name=exuT	gene_position=731	gene_product=hexuronate transporter	gene_strand=>	locus_tag=ECB_02962	snp_type=nonsynonymous
SNP	1892	1091	REL606	3184072	G	aa_new_seq=M	aa_position=5	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=yqjG	gene_name=yqjG	gene_position=15	gene_product=predicted S-transferase	gene_strand=>	locus_tag=ECB_02971	snp_type=nonsynonymous
SNP	1893	1092	REL606	3187264	C	gene_name=yhaJ/yhaK	gene_position=intergenic (-17/-88)	gene_product=predicted DNA-binding transcriptional regulator/predicted pirin-related protein	locus_tag=ECB_02974/ECB_02975	snp_type=intergenic
SNP	1894	1093	REL606	3188042	G	aa_new_seq=M	aa_position=231	aa_ref_seq=M	codon_new_seq=GTG	codon_position=1	codon_ref_seq=TTG	gene_list=yhaK	gene_name=yhaK	gene_position=691	gene_product=predicted pirin-related protein	gene_strand=>	locus_tag=ECB_02975	snp_type=synonymous
SNP	1895	1094	REL606	3192570	G	aa_new_seq=F	aa_position=38	aa_ref_seq=L	codon_new_seq=TTC	codon_position=3	codon_ref_seq=TTA	gene_list=tdcG	gene_name=tdcG	gene_position=114	gene_product=L-serine dehydratase 3	gene_strand=<	locus_tag=ECB_02979	snp_type=nonsynonymous
SNP	1896	1095	REL606	3211263	G	aa_new_seq=L	aa_position=111	aa_ref_seq=M	codon_new_seq=CTC	codon_position=1	codon_ref_seq=ATC	gene_list=agaR	gene_name=agaR	gene_position=331	gene_product=DNA-binding transcriptional dual regulator	gene_strand=<	locus_tag=ECB_02996	snp_type=nonsynonymous
SNP	1897	1096	REL606	3217222	C	aa_new_seq=S	aa_position=5	aa_ref_seq=Y	codon_new_seq=TCC	codon_position=2	codon_ref_seq=TAC	gene_list=agaS	gene_name=agaS	gene_position=14	gene_product=tagatose-6-phosphate ketose/aldose isomerase	gene_strand=>	locus_tag=ECB_03003	snp_type=nonsynonymous
SNP	1898	1097	REL606	3219202	C	aa_new_seq=T	aa_position=276	aa_ref_seq=N	codon_new_seq=ACT	codon_position=2	codon_ref_seq=AAT	gene_list=agaY	gene_name=agaY	gene_position=827	gene_product=tagatose 6-phosphate aldolase 1, kbaY subunit	gene_strand=>	locus_tag=ECB_03004	snp_type=nonsynonymous
SNP	1899	1098	REL606	3227037	G	aa_new_seq=D	aa_position=155	aa_ref_seq=Y	codon_new_seq=GAT	codon_position=1	codon_ref_seq=TAT	gene_list=yraK	gene_name=yraK	gene_position=463	gene_product=predicted fimbrial-like adhesin protein	gene_strand=>	locus_tag=ECB_03012	snp_type=nonsynonymous
SNP	1900	1099	REL606	3236743	C	aa_new_seq=H	aa_position=9	aa_ref_seq=N	codon_new_seq=CAT	codon_position=1	codon_ref_seq=AAT	gene_list=yhbU	gene_name=yhbU	gene_position=25	gene_product=predicted peptidase (collagenase-like)	gene_strand=>	locus_tag=ECB_03025	snp_type=nonsynonymous
SNP	1901	1100	REL606	3243698	C	aa_new_seq=R	aa_position=154	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=nlpI	gene_name=nlpI	gene_position=461	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_03030	snp_type=nonsynonymous
SNP	1902	1101	REL606	3248957	T	aa_new_seq=E	aa_position=764	aa_ref_seq=D	codon_new_seq=GAA	codon_position=3	codon_ref_seq=GAT	gene_list=infB	gene_name=infB	gene_position=2292	gene_product=translation initiation factor IF-2	gene_strand=<	locus_tag=ECB_03035	snp_type=nonsynonymous
SNP	1903	1102	REL606	3252768	G	gene_name=nusA/yhbC	gene_position=intergenic (-8/+20)	gene_product=transcription elongation factor NusA/hypothetical protein	locus_tag=ECB_03036/ECB_03037	snp_type=intergenic
SNP	1904	1103	REL606	3253256	C	gene_name=yhbC/metZ	gene_position=intergenic (-16/+191)	gene_product=hypothetical protein/tRNA-Met	locus_tag=ECB_03037/ECB_t00057	snp_type=intergenic
SNP	1905	1105	REL606	3260604	G	aa_new_seq=D	aa_position=522	aa_ref_seq=E	codon_new_seq=GAC	codon_position=3	codon_ref_seq=GAA	gene_list=hflB	gene_name=hflB	gene_position=1566	gene_product=protease, ATP-dependent zinc-metallo	gene_strand=<	locus_tag=ECB_03043	snp_type=nonsynonymous
SNP	1906	1106	REL606	3262857	C	aa_new_seq=L	aa_position=14	aa_ref_seq=L	codon_new_seq=CTG	codon_position=3	codon_ref_seq=CTT	gene_list=rrmJ	gene_name=rrmJ	gene_position=42	gene_product=23S rRNA methyltransferase	gene_strand=<	locus_tag=ECB_03044	snp_type=synonymous
SNP	1907	1107	REL606	3272110	C	gene_name=yrbA/yrbB	gene_position=intergenic (-72/+88)	gene_product=predicted DNA-binding transcriptional regulator/hypothetical protein	locus_tag=ECB_03055/ECB_03056	snp_type=intergenic
SNP	1908	1108	REL606	3281577	C	aa_new_seq=T	aa_position=57	aa_ref_seq=N	codon_new_seq=ACC	codon_position=2	codon_ref_seq=AAC	gene_list=yhbH	gene_name=yhbH	gene_position=170	gene_product=predicted ribosome-associated, sigma 54 modulation protein	gene_strand=>	locus_tag=ECB_03068	snp_type=nonsynonymous
SNP	1909	1109	REL606	3288092	A	aa_new_seq=C	aa_position=57	aa_ref_seq=R	codon_new_seq=TGT	codon_position=1	codon_ref_seq=CGT	gene_list=arcB	gene_name=arcB	gene_position=169	gene_product=hybrid sensory histidine kinase in two-component regulatory system with ArcA	gene_strand=<	locus_tag=ECB_03075	snp_type=nonsynonymous
DEL	1486	1110,15	REL606	3289962	16	gene_list=gltB	gene_name=gltB	gene_position=coding (96-111/4554 nt)	gene_product=glutamate synthase, large subunit	gene_strand=>	locus_tag=ECB_03077
SNP	1910	1111	REL606	3297875	C	aa_new_seq=G	aa_position=125	aa_ref_seq=V	codon_new_seq=GGC	codon_position=2	codon_ref_seq=GTC	gene_list=nanK	gene_name=nanK	gene_position=374	gene_product=N-acetylmannosamine kinase	gene_strand=<	locus_tag=ECB_03082	snp_type=nonsynonymous
SNP	1911	1112	REL606	3303212	G	aa_new_seq=R	aa_position=149	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=dcuD	gene_name=dcuD	gene_position=446	gene_product=predicted transporter	gene_strand=>	locus_tag=ECB_03087	snp_type=nonsynonymous
SNP	1912	1113	REL606	3303353	C	aa_new_seq=S	aa_position=196	aa_ref_seq=Y	codon_new_seq=TCC	codon_position=2	codon_ref_seq=TAC	gene_list=dcuD	gene_name=dcuD	gene_position=587	gene_product=predicted transporter	gene_strand=>	locus_tag=ECB_03087	snp_type=nonsynonymous
SNP	1913	1116	REL606	3325845	G	aa_new_seq=A	aa_position=142	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=maf	gene_name=maf	gene_position=425	gene_product=Maf-like protein	gene_strand=<	locus_tag=ECB_03107	snp_type=nonsynonymous
SNP	1914	1117	REL606	3333231	G	gene_name=yhdH/accB	gene_position=intergenic (+882/-96)	gene_product=predicted oxidoreductase, Zn-dependent and NAD(P)-binding/acetyl-CoA carboxylase	locus_tag=ECB_03112/ECB_03113	snp_type=intergenic
SNP	1915	1118	REL606	3339158	C	gene_name=yhdG/fis	gene_position=intergenic (+22/-4)	gene_product=tRNA-dihydrouridine synthase B/DNA-binding protein Fis	locus_tag=ECB_03118/ECB_03119	snp_type=intergenic
SNP	1916	1119	REL606	3341864	A	aa_new_seq=Q	aa_position=37	aa_ref_seq=P	codon_new_seq=CAG	codon_position=2	codon_ref_seq=CCG	gene_list=acrE	gene_name=acrE	gene_position=110	gene_product=cytoplasmic membrane lipoprotein	gene_strand=>	locus_tag=ECB_03123	snp_type=nonsynonymous
SNP	1917	1127	REL606	3360344	C	aa_new_seq=C	aa_position=9	aa_ref_seq=F	codon_new_seq=TGT	codon_position=2	codon_ref_seq=TTT	gene_list=smg	gene_name=smg	gene_position=26	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_03135	snp_type=nonsynonymous
SNP	1918	1128	REL606	3369432	C	aa_new_seq=G	aa_position=50	aa_ref_seq=D	codon_new_seq=GGC	codon_position=2	codon_ref_seq=GAC	gene_list=rpsD	gene_name=rpsD	gene_position=149	gene_product=30S ribosomal protein S4	gene_strand=<	locus_tag=ECB_03147	snp_type=nonsynonymous
SNP	1919	1129	REL606	3370027	A	aa_new_seq=M	aa_position=117	aa_ref_seq=K	codon_new_seq=ATG	codon_position=2	codon_ref_seq=AAG	gene_list=rpsM	gene_name=rpsM	gene_position=350	gene_product=30S ribosomal protein S13	gene_strand=<	locus_tag=ECB_03149	snp_type=nonsynonymous
SNP	1920	1130	REL606	3373799	C	aa_new_seq=V	aa_position=83	aa_ref_seq=F	codon_new_seq=GTC	codon_position=1	codon_ref_seq=TTC	gene_list=rplF	gene_name=rplF	gene_position=247	gene_product=50S ribosomal protein L6	gene_strand=<	locus_tag=ECB_03156	snp_type=nonsynonymous
SNP	1921	1131	REL606	3384112	G	aa_new_seq=E	aa_position=210	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=gspC	gene_name=gspC	gene_position=630	gene_product=general secretory pathway component, cryptic	gene_strand=>	locus_tag=ECB_03175	snp_type=nonsynonymous
SNP	1922	1138	REL606	3404580	G	aa_new_seq=Q	aa_position=249	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=fkpA	gene_name=fkpA	gene_position=745	gene_product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)	gene_strand=<	locus_tag=ECB_03198	snp_type=nonsynonymous
SNP	1923	1139	REL606	3414905	G	aa_new_seq=G	aa_position=70	aa_ref_seq=G	codon_new_seq=GGG	codon_position=3	codon_ref_seq=GGT	gene_list=yhfK	gene_name=yhfK	gene_position=210	gene_product=conserved inner membrane protein	gene_strand=>	locus_tag=ECB_03209	snp_type=synonymous
SNP	1924	1143	REL606	3436635	G	aa_new_seq=T	aa_position=213	aa_ref_seq=K	codon_new_seq=ACG	codon_position=2	codon_ref_seq=AAG	gene_list=yhfV	gene_name=yhfV	gene_position=638	gene_product=predicted hydrolase	gene_strand=<	locus_tag=ECB_03231	snp_type=nonsynonymous
SNP	1925	1144	REL606	3459043	C	aa_new_seq=Q	aa_position=196	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=hslO	gene_name=hslO	gene_position=586	gene_product=Hsp33-like chaperonin	gene_strand=>	locus_tag=ECB_03253	snp_type=nonsynonymous
SNP	1926	1145	REL606	3462285	C	aa_new_seq=Q	aa_position=262	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=pckA	gene_name=pckA	gene_position=784	gene_product=phosphoenolpyruvate carboxykinase	gene_strand=>	locus_tag=ECB_03255	snp_type=nonsynonymous
SNP	1927	1146	REL606	3466075	C	aa_new_seq=H	aa_position=2	aa_ref_seq=N	codon_new_seq=CAT	codon_position=1	codon_ref_seq=AAT	gene_list=yhgF	gene_name=yhgF	gene_position=4	gene_product=predicted transcriptional accessory protein	gene_strand=>	locus_tag=ECB_03259	snp_type=nonsynonymous
SNP	1928	1147	REL606	3470129	G	aa_new_seq=R	aa_position=353	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=feoB	gene_name=feoB	gene_position=1058	gene_product=ferrous iron transport protein B	gene_strand=>	locus_tag=ECB_03261	snp_type=nonsynonymous
SNP	1929	1148	REL606	3475086	G	gene_name=yhgI/gntT	gene_position=intergenic (+222/-139)	gene_product=predicted gluconate transport associated protein/gluconate transporter, high-affinity GNT I system	locus_tag=ECB_03266/ECB_03267	snp_type=intergenic
SNP	1930	1149	REL606	3483047	A	aa_new_seq=S	aa_position=455	aa_ref_seq=R	codon_new_seq=AGC	codon_position=1	codon_ref_seq=CGC	gene_list=malT	gene_name=malT	gene_position=1363	gene_product=transcriptional regulator MalT	gene_strand=>	locus_tag=ECB_03270	snp_type=nonsynonymous
SNP	1931	1150	REL606	3485307	C	aa_new_seq=R	aa_position=48	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=rtcA	gene_name=rtcA	gene_position=143	gene_product=RNA 3'-terminal-phosphate cyclase	gene_strand=<	locus_tag=ECB_03271	snp_type=nonsynonymous
SNP	1932	1151	REL606	3490112	T	aa_new_seq=T	aa_position=105	aa_ref_seq=A	codon_new_seq=ACG	codon_position=1	codon_ref_seq=GCG	gene_list=glpE	gene_name=glpE	gene_position=313	gene_product=thiosulfate sulfurtransferase	gene_strand=<	locus_tag=ECB_03276	snp_type=nonsynonymous
SNP	1933	1152	REL606	3493524	G	aa_new_seq=P	aa_position=136	aa_ref_seq=T	codon_new_seq=CCC	codon_position=1	codon_ref_seq=ACC	gene_list=ECB_03279	gene_name=ECB_03279	gene_position=406	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_03279	snp_type=nonsynonymous
SNP	1934	1153	REL606	3495915	T	aa_new_seq=G	aa_position=707	aa_ref_seq=G	codon_new_seq=GGA	codon_position=3	codon_ref_seq=GGC	gene_list=glgP	gene_name=glgP	gene_position=2121	gene_product=glycogen phosphorylase	gene_strand=<	locus_tag=ECB_03280	snp_type=synonymous
SNP	1935	1154	REL606	3498495	C	aa_new_seq=E	aa_position=331	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=glgA	gene_name=glgA	gene_position=993	gene_product=glycogen synthase	gene_strand=<	locus_tag=ECB_03281	snp_type=nonsynonymous
SNP	1936	1155	REL606	3499025	G	aa_new_seq=Q	aa_position=155	aa_ref_seq=K	codon_new_seq=CAG	codon_position=1	codon_ref_seq=AAG	gene_list=glgA	gene_name=glgA	gene_position=463	gene_product=glycogen synthase	gene_strand=<	locus_tag=ECB_03281	snp_type=nonsynonymous
SNP	1937	1156	REL606	3500952	C	aa_new_seq=M	aa_position=608	aa_ref_seq=M	codon_new_seq=GTG	codon_position=1	codon_ref_seq=TTG	gene_list=glgX	gene_name=glgX	gene_position=1822	gene_product=glycogen debranching enzyme	gene_strand=<	locus_tag=ECB_03283	snp_type=synonymous
SNP	1938	1157	REL606	3506469	C	gene_name=asd/yhgN	gene_position=intergenic (-137/-55)	gene_product=aspartate-semialdehyde dehydrogenase/predicted antibiotic transporter	locus_tag=ECB_03285/ECB_03286	snp_type=intergenic
SNP	1939	1158	REL606	3506840	G	aa_new_seq=C	aa_position=106	aa_ref_seq=F	codon_new_seq=TGT	codon_position=2	codon_ref_seq=TTT	gene_list=yhgN	gene_name=yhgN	gene_position=317	gene_product=predicted antibiotic transporter	gene_strand=>	locus_tag=ECB_03286	snp_type=nonsynonymous
SNP	1940	1159	REL606	3507177	C	aa_new_seq=R	aa_position=446	aa_ref_seq=S	codon_new_seq=AGG	codon_position=3	codon_ref_seq=AGT	gene_list=gntU	gene_name=gntU	gene_position=1338	gene_product=gluconate transporter, low affinity GNT 1 system	gene_strand=<	locus_tag=ECB_03287	snp_type=nonsynonymous
SNP	1941	1160	REL606	3519804	G	aa_new_seq=P	aa_position=18	aa_ref_seq=Q	codon_new_seq=CCG	codon_position=2	codon_ref_seq=CAG	gene_list=ugpC	gene_name=ugpC	gene_position=53	gene_product=glycerol-3-phosphate transporter subunit	gene_strand=<	locus_tag=ECB_03299	snp_type=nonsynonymous
SNP	1942	1161	REL606	3521505	C	aa_new_seq=C	aa_position=28	aa_ref_seq=F	codon_new_seq=TGT	codon_position=2	codon_ref_seq=TTT	gene_list=ugpA	gene_name=ugpA	gene_position=83	gene_product=glycerol-3-phosphate transporter subunit	gene_strand=<	locus_tag=ECB_03301	snp_type=nonsynonymous
SNP	1943	1162	REL606	3527310	C	aa_new_seq=A	aa_position=309	aa_ref_seq=S	codon_new_seq=GCT	codon_position=1	codon_ref_seq=TCT	gene_list=livK	gene_name=livK	gene_position=925	gene_product=leucine transporter subunit	gene_strand=<	locus_tag=ECB_03307	snp_type=nonsynonymous
SNP	1944	1163	REL606	3528587	C	gene_name=livK/yhhK	gene_position=intergenic (-353/-71)	gene_product=leucine transporter subunit/hypothetical protein	locus_tag=ECB_03307/ECB_03308	snp_type=intergenic
SNP	1945	1164	REL606	3537761	G	aa_new_seq=R	aa_position=208	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=zntA	gene_name=zntA	gene_position=623	gene_product=zinc, cobalt and lead efflux system	gene_strand=>	locus_tag=ECB_03318	snp_type=nonsynonymous
SNP	1946	1165	REL606	3541981	C	aa_new_seq=Q	aa_position=147	aa_ref_seq=H	codon_new_seq=CAG	codon_position=3	codon_ref_seq=CAT	gene_list=yhhS	gene_name=yhhS	gene_position=441	gene_product=predicted transporter	gene_strand=<	locus_tag=ECB_03322	snp_type=nonsynonymous
SNP	1947	1166	REL606	3542534	C	gene_name=yhhS/yhhT	gene_position=intergenic (-113/-19)	gene_product=predicted transporter/predicted inner membrane protein	locus_tag=ECB_03322/ECB_03323	snp_type=intergenic
SNP	1948	1167	REL606	3543278	C	aa_new_seq=V	aa_position=242	aa_ref_seq=V	codon_new_seq=GTC	codon_position=3	codon_ref_seq=GTA	gene_list=yhhT	gene_name=yhhT	gene_position=726	gene_product=predicted inner membrane protein	gene_strand=>	locus_tag=ECB_03323	snp_type=synonymous
SNP	1949	1168	REL606	3543935	C	aa_new_seq=D	aa_position=93	aa_ref_seq=E	codon_new_seq=GAC	codon_position=3	codon_ref_seq=GAA	gene_list=acpT	gene_name=acpT	gene_position=279	gene_product=holo-(acyl carrier protein) synthase 2	gene_strand=>	locus_tag=ECB_03324	snp_type=nonsynonymous
SNP	1950	1182	REL606	3555146	T	aa_new_seq=S	aa_position=27	aa_ref_seq=S	codon_new_seq=TCT	codon_position=3	codon_ref_seq=TCG	gene_list=yhhI	gene_name=yhhI	gene_position=81	gene_product=predicted transposase	gene_strand=>	locus_tag=ECB_03334	snp_type=synonymous
SNP	1951	1194	REL606	3557298	A	aa_new_seq=L	aa_position=65	aa_ref_seq=R	codon_new_seq=CTG	codon_position=2	codon_ref_seq=CGG	gene_list=yhhJ	gene_name=yhhJ	gene_position=194	gene_product=predicted transporter subunit: membrane component of ABC superfamily	gene_strand=<	locus_tag=ECB_03335	snp_type=nonsynonymous
SNP	1952	1195	REL606	3561248	C	aa_new_seq=V	aa_position=15	aa_ref_seq=L	codon_new_seq=GTA	codon_position=1	codon_ref_seq=TTA	gene_list=yhiI	gene_name=yhiI	gene_position=43	gene_product=predicted HlyD family secretion protein	gene_strand=<	locus_tag=ECB_03337	snp_type=nonsynonymous
SNP	1953	1196	REL606	3566725	G	gene_name=yhiM/yhiN	gene_position=intergenic (+143/+172)	gene_product=conserved inner membrane protein/predicted oxidoreductase with FAD/NAD(P)-binding domain	locus_tag=ECB_03340/ECB_03341	snp_type=intergenic
SNP	1954	1197	REL606	3574505	A	aa_new_seq=P	aa_position=456	aa_ref_seq=P	codon_new_seq=CCT	codon_position=3	codon_ref_seq=CCG	gene_list=prlC	gene_name=prlC	gene_position=1368	gene_product=oligopeptidase A	gene_strand=<	locus_tag=ECB_03347	snp_type=synonymous
SNP	1955	1198	REL606	3575750	G	aa_new_seq=V	aa_position=41	aa_ref_seq=V	codon_new_seq=GTC	codon_position=3	codon_ref_seq=GTA	gene_list=prlC	gene_name=prlC	gene_position=123	gene_product=oligopeptidase A	gene_strand=<	locus_tag=ECB_03347	snp_type=synonymous
SNP	1956	1199	REL606	3576996	C	aa_new_seq=T	aa_position=3	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=gor	gene_name=gor	gene_position=8	gene_product=glutathione reductase	gene_strand=>	locus_tag=ECB_03349	snp_type=nonsynonymous
SNP	1957	1202	REL606	3581373	C	gene_name=arsC/yhiS	gene_position=intergenic (+21/-608)	gene_product=arsenate reductase/hypothetical protein	locus_tag=ECB_03352/ECB_03353	snp_type=intergenic
SNP	1958	1206	REL606	3596144	G	aa_new_seq=L	aa_position=310	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=gadA	gene_name=gadA	gene_position=928	gene_product=glutamate decarboxylase A, PLP-dependent	gene_strand=<	locus_tag=ECB_03365	snp_type=nonsynonymous
SNP	1959	1209	REL606	3599293	C	aa_new_seq=N	aa_position=70	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=treF	gene_name=treF	gene_position=210	gene_product=cytoplasmic trehalase	gene_strand=>	locus_tag=ECB_03367	snp_type=nonsynonymous
SNP	1960	1210	REL606	3605645	G	gene_name=yhjE/yhjG	gene_position=intergenic (+45/+137)	gene_product=predicted transporter/predicted outer membrane biogenesis protein	locus_tag=ECB_03371/ECB_03372	snp_type=intergenic
SNP	1961	1211	REL606	3609865	G	gene_name=kdgK/yhjJ	gene_position=intergenic (+25/+71)	gene_product=ketodeoxygluconokinase/predicted zinc-dependent peptidase	locus_tag=ECB_03374/ECB_03375	snp_type=intergenic
SNP	1962	1212	REL606	3612954	G	gene_name=dctA/yhjK	gene_position=intergenic (-15/+168)	gene_product=C4-dicarboxylate transport protein/predicted diguanylate cyclase	locus_tag=ECB_03376/ECB_03377	snp_type=intergenic
SNP	1963	1213	REL606	3613023	C	gene_name=dctA/yhjK	gene_position=intergenic (-84/+99)	gene_product=C4-dicarboxylate transport protein/predicted diguanylate cyclase	locus_tag=ECB_03376/ECB_03377	snp_type=intergenic
SNP	1964	1214	REL606	3617683	G	aa_new_seq=T	aa_position=328	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=bcsC	gene_name=bcsC	gene_position=983	gene_product=cellulose synthase subunit	gene_strand=<	locus_tag=ECB_03378	snp_type=nonsynonymous
SNP	1965	1215	REL606	3617837	C	aa_new_seq=V	aa_position=277	aa_ref_seq=L	codon_new_seq=GTA	codon_position=1	codon_ref_seq=TTA	gene_list=bcsC	gene_name=bcsC	gene_position=829	gene_product=cellulose synthase subunit	gene_strand=<	locus_tag=ECB_03378	snp_type=nonsynonymous
SNP	1966	1235	REL606	3641648	C	aa_new_seq=R	aa_position=273	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=yhjX	gene_name=yhjX	gene_position=818	gene_product=predicted transporter	gene_strand=<	locus_tag=ECB_03397	snp_type=nonsynonymous
SNP	1967	1236	REL606	3644741	G	aa_new_seq=G	aa_position=686	aa_ref_seq=G	codon_new_seq=GGC	codon_position=3	codon_ref_seq=GGA	gene_list=bisC	gene_name=bisC	gene_position=2058	gene_product=biotin sulfoxide reductase	gene_strand=<	locus_tag=ECB_03401	snp_type=synonymous
SNP	1968	1237	REL606	3650528	C	aa_new_seq=L	aa_position=8	aa_ref_seq=M	codon_new_seq=CTC	codon_position=1	codon_ref_seq=ATC	gene_list=cspA	gene_name=cspA	gene_position=22	gene_product=major cold shock protein	gene_strand=>	locus_tag=ECB_03406	snp_type=nonsynonymous
SNP	1969	1239	REL606	3657614	C	aa_new_seq=R	aa_position=69	aa_ref_seq=I	codon_new_seq=AGA	codon_position=2	codon_ref_seq=ATA	gene_list=yiaA	gene_name=yiaA	gene_position=206	gene_product=conserved inner membrane protein	gene_strand=<	locus_tag=ECB_03414	snp_type=nonsynonymous
SNP	1970	1240	REL606	3668060	G	aa_new_seq=L	aa_position=36	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=malS	gene_name=malS	gene_position=108	gene_product=periplasmic alpha-amylase precursor	gene_strand=>	locus_tag=ECB_03423	snp_type=nonsynonymous
SNP	1971	1241	REL606	3683249	G	aa_new_seq=D	aa_position=314	aa_ref_seq=Y	codon_new_seq=GAC	codon_position=1	codon_ref_seq=TAC	gene_list=ECB_03437	gene_name=ECB_03437	gene_position=940	gene_product=putative permease	gene_strand=>	locus_tag=ECB_03437	snp_type=nonsynonymous
SNP	1972	1242	REL606	3685258	C	aa_new_seq=S	aa_position=513	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=ECB_03438	gene_name=ECB_03438	gene_position=1538	gene_product=conserved hypothetical protein	gene_strand=>	locus_tag=ECB_03438	snp_type=nonsynonymous
SNP	1973	1243	REL606	3692673	G	gene_name=yiaY/selB	gene_position=intergenic (-153/+37)	gene_product=predicted Fe-containing alcohol dehydrogenase/selenocysteinyl-tRNA-specific translation factor	locus_tag=ECB_03444/ECB_03445	snp_type=intergenic
SNP	1974	1247	REL606	3699461	C	aa_new_seq=T	aa_position=862	aa_ref_seq=N	codon_new_seq=ACC	codon_position=2	codon_ref_seq=AAC	gene_list=rhsA	gene_name=rhsA	gene_position=2585	gene_product=rhsA element core protein RshA	gene_strand=>	locus_tag=ECB_03448	snp_type=nonsynonymous
SNP	1975	1266	REL606	3711747	C	gene_name=yibL/ECB_03459	gene_position=intergenic (+27/-517)	gene_product=hypothetical protein/conserved hypothetical protein	locus_tag=ECB_03458/ECB_03459	snp_type=intergenic
SNP	1976	1267	REL606	3712483	C	aa_new_seq=Q	aa_position=74	aa_ref_seq=K	codon_new_seq=CAG	codon_position=1	codon_ref_seq=AAG	gene_list=ECB_03459	gene_name=ECB_03459	gene_position=220	gene_product=conserved hypothetical protein	gene_strand=>	locus_tag=ECB_03459	snp_type=nonsynonymous
SNP	1977	1268	REL606	3713828	T	aa_new_seq=*	aa_position=280	aa_ref_seq=G	codon_new_seq=TGA	codon_position=1	codon_ref_seq=GGA	gene_list=ECB_03460	gene_name=ECB_03460	gene_position=838	gene_product=putative adhesin	gene_strand=>	locus_tag=ECB_03460	snp_type=nonsynonymous
SNP	1978	1269	REL606	3716330	C	aa_new_seq=Q	aa_position=1114	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=ECB_03460	gene_name=ECB_03460	gene_position=3340	gene_product=putative adhesin	gene_strand=>	locus_tag=ECB_03460	snp_type=nonsynonymous
SNP	1979	1270	REL606	3716676	A	aa_new_seq=D	aa_position=1229	aa_ref_seq=A	codon_new_seq=GAT	codon_position=2	codon_ref_seq=GCT	gene_list=ECB_03460	gene_name=ECB_03460	gene_position=3686	gene_product=putative adhesin	gene_strand=>	locus_tag=ECB_03460	snp_type=nonsynonymous
SNP	1980	1271	REL606	3718474	G	aa_new_seq=C	aa_position=89	aa_ref_seq=F	codon_new_seq=TGC	codon_position=2	codon_ref_seq=TTC	gene_list=lldP	gene_name=lldP	gene_position=266	gene_product=L-lactate permease	gene_strand=>	locus_tag=ECB_03461	snp_type=nonsynonymous
SNP	1981	1272	REL606	3718728	T	aa_new_seq=C	aa_position=174	aa_ref_seq=G	codon_new_seq=TGC	codon_position=1	codon_ref_seq=GGC	gene_list=lldP	gene_name=lldP	gene_position=520	gene_product=L-lactate permease	gene_strand=>	locus_tag=ECB_03461	snp_type=nonsynonymous
SNP	1982	1273	REL606	3722953	T	aa_new_seq=S	aa_position=126	aa_ref_seq=R	codon_new_seq=AGC	codon_position=1	codon_ref_seq=CGC	gene_list=cysE	gene_name=cysE	gene_position=376	gene_product=serine acetyltransferase	gene_strand=<	locus_tag=ECB_03465	snp_type=nonsynonymous
SNP	1983	1274	REL606	3724516	G	aa_new_seq=H	aa_position=127	aa_ref_seq=N	codon_new_seq=CAC	codon_position=1	codon_ref_seq=AAC	gene_list=secB	gene_name=secB	gene_position=379	gene_product=export protein SecB	gene_strand=<	locus_tag=ECB_03467	snp_type=nonsynonymous
SNP	1984	1275	REL606	3737701	G	aa_new_seq=G	aa_position=42	aa_ref_seq=G	codon_new_seq=GGC	codon_position=3	codon_ref_seq=GGA	gene_list=waaL	gene_name=waaL	gene_position=126	gene_product=Lipid A-core, surface polymer ligase	gene_strand=<	locus_tag=ECB_03479	snp_type=synonymous
SNP	1985	1279	REL606	3743455	G	aa_new_seq=P	aa_position=15	aa_ref_seq=T	codon_new_seq=CCA	codon_position=1	codon_ref_seq=ACA	gene_list=waaO	gene_name=waaO	gene_position=43	gene_product=UDP-glucose:(Glucosyl) LPS alpha1,3-glucosyltransferase WaaO	gene_strand=<	locus_tag=ECB_03486	snp_type=nonsynonymous
SNP	1986	1280	REL606	3748382	G	aa_new_seq=G	aa_position=68	aa_ref_seq=V	codon_new_seq=GGC	codon_position=2	codon_ref_seq=GTC	gene_list=coaD	gene_name=coaD	gene_position=203	gene_product=phosphopantetheine adenylyltransferase	gene_strand=>	locus_tag=ECB_03491	snp_type=nonsynonymous
SNP	1987	1281	REL606	3757158	C	gene_name=dinD/yicG	gene_position=intergenic (+218/-73)	gene_product=DNA-damage-inducible protein/conserved inner membrane protein	locus_tag=ECB_03502/ECB_03503	snp_type=intergenic
SNP	1988	1282	REL606	3759405	G	aa_new_seq=I	aa_position=41	aa_ref_seq=I	codon_new_seq=ATC	codon_position=3	codon_ref_seq=ATA	gene_list=yicF	gene_name=yicF	gene_position=123	gene_product=NAD-dependent DNA ligase LigB	gene_strand=<	locus_tag=ECB_03504	snp_type=synonymous
SNP	1989	1283	REL606	3762741	T	aa_new_seq=I	aa_position=662	aa_ref_seq=K	codon_new_seq=ATA	codon_position=2	codon_ref_seq=AAA	gene_list=spoT	gene_name=spoT	gene_position=1985	gene_product=bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	gene_strand=>	locus_tag=ECB_03507	snp_type=nonsynonymous
SNP	1990	1284	REL606	3781098	G	aa_new_seq=R	aa_position=377	aa_ref_seq=M	codon_new_seq=AGG	codon_position=2	codon_ref_seq=ATG	gene_list=ECB_03520	gene_name=ECB_03520	gene_position=1130	gene_product=conserved hypothetical protein	gene_strand=>	locus_tag=ECB_03520	snp_type=nonsynonymous
SNP	1991	1285	REL606	3781398	C	aa_new_seq=L	aa_position=21	aa_ref_seq=L	codon_new_seq=CTC	codon_position=3	codon_ref_seq=CTA	gene_list=ECB_03521	gene_name=ECB_03521	gene_position=63	gene_product=conserved hypothetical protein	gene_strand=>	locus_tag=ECB_03521	snp_type=synonymous
SNP	1992	1286	REL606	3792298	C	aa_new_seq=P	aa_position=135	aa_ref_seq=H	codon_new_seq=CCT	codon_position=2	codon_ref_seq=CAT	gene_list=ECB_03532	gene_name=ECB_03532	gene_position=404	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_03532	snp_type=nonsynonymous
SNP	1993	1289	REL606	3797813	G	aa_new_seq=R	aa_position=310	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=yicK	gene_name=yicK	gene_position=929	gene_product=predicted sugar efflux system	gene_strand=>	locus_tag=ECB_03542	snp_type=nonsynonymous
SNP	1994	1290	REL606	3805135	C	aa_new_seq=L	aa_position=414	aa_ref_seq=M	codon_new_seq=CTC	codon_position=1	codon_ref_seq=ATC	gene_list=ade	gene_name=ade	gene_position=1240	gene_product=cryptic adenine deaminase	gene_strand=>	locus_tag=ECB_03549	snp_type=nonsynonymous
SNP	1995	1291	REL606	3805357	C	aa_new_seq=M	aa_position=488	aa_ref_seq=M	codon_new_seq=CTG	codon_position=1	codon_ref_seq=ATG	gene_list=ade	gene_name=ade	gene_position=1462	gene_product=cryptic adenine deaminase	gene_strand=>	locus_tag=ECB_03549	snp_type=synonymous
SNP	1996	1292	REL606	3806072	C	aa_new_seq=G	aa_position=343	aa_ref_seq=V	codon_new_seq=GGG	codon_position=2	codon_ref_seq=GTG	gene_list=uhpT	gene_name=uhpT	gene_position=1028	gene_product=sugar phosphate antiporter	gene_strand=<	locus_tag=ECB_03550	snp_type=nonsynonymous
SNP	1997	1293	REL606	3806477	C	aa_new_seq=S	aa_position=208	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=uhpT	gene_name=uhpT	gene_position=623	gene_product=sugar phosphate antiporter	gene_strand=<	locus_tag=ECB_03550	snp_type=nonsynonymous
SNP	1998	1294	REL606	3822363	C	aa_new_seq=R	aa_position=22	aa_ref_seq=M	codon_new_seq=AGG	codon_position=2	codon_ref_seq=ATG	gene_list=glvG	gene_name=glvG	gene_position=65	gene_product=predicted 6-phospho-beta-glucosidase	gene_strand=<	locus_tag=ECB_03565	snp_type=nonsynonymous
SNP	1999	1295	REL606	3822763	G	aa_new_seq=S	aa_position=427	aa_ref_seq=S	codon_new_seq=TCC	codon_position=3	codon_ref_seq=TCA	gene_list=glvBC	gene_name=glvBC	gene_position=1281	gene_product=arbutin specific enzyme IIBC component of PTS	gene_strand=<	locus_tag=ECB_03566	snp_type=synonymous
SNP	2000	1296	REL606	3822784	C	aa_new_seq=E	aa_position=420	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=glvBC	gene_name=glvBC	gene_position=1260	gene_product=arbutin specific enzyme IIBC component of PTS	gene_strand=<	locus_tag=ECB_03566	snp_type=nonsynonymous
SNP	2001	1297	REL606	3824042	C	aa_new_seq=R	aa_position=1	aa_ref_seq=M	codon_new_seq=AGG	codon_position=2	codon_ref_seq=ATG	gene_list=glvBC	gene_name=glvBC	gene_position=2	gene_product=arbutin specific enzyme IIBC component of PTS	gene_strand=<	locus_tag=ECB_03566	snp_type=nonsynonymous
SNP	2002	1298	REL606	3834332	G	aa_new_seq=F	aa_position=168	aa_ref_seq=L	codon_new_seq=TTC	codon_position=3	codon_ref_seq=TTA	gene_list=dgoK	gene_name=dgoK	gene_position=504	gene_product=2-oxo-3-deoxygalactonate kinase	gene_strand=<	locus_tag=ECB_03577	snp_type=nonsynonymous
SNP	2003	1299	REL606	3835234	C	aa_new_seq=R	aa_position=96	aa_ref_seq=S	codon_new_seq=AGG	codon_position=3	codon_ref_seq=AGT	gene_list=dgoR	gene_name=dgoR	gene_position=288	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=<	locus_tag=ECB_03578	snp_type=nonsynonymous
SNP	2004	1300	REL606	3842724	G	aa_new_seq=A	aa_position=456	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=dnaA	gene_name=dnaA	gene_position=1367	gene_product=chromosomal replication initiation protein	gene_strand=<	locus_tag=ECB_03585	snp_type=nonsynonymous
SNP	2005	1301	REL606	3856914	C	aa_new_seq=L	aa_position=19	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=yieG	gene_name=yieG	gene_position=57	gene_product=predicted inner membrane protein	gene_strand=<	locus_tag=ECB_03598	snp_type=nonsynonymous
SNP	2006	1302	REL606	3857359	G	aa_new_seq=D	aa_position=75	aa_ref_seq=Y	codon_new_seq=GAC	codon_position=1	codon_ref_seq=TAC	gene_list=yieH	gene_name=yieH	gene_position=223	gene_product=predicted hydrolase	gene_strand=>	locus_tag=ECB_03599	snp_type=nonsynonymous
SNP	2007	1303	REL606	3857817	G	gene_name=yieH/yieI	gene_position=intergenic (+15/-52)	gene_product=predicted hydrolase/predicted inner membrane protein	locus_tag=ECB_03599/ECB_03600	snp_type=intergenic
SNP	2008	1304	REL606	3859873	G	aa_new_seq=N	aa_position=367	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=yieL	gene_name=yieL	gene_position=1101	gene_product=predicted xylanase	gene_strand=<	locus_tag=ECB_03603	snp_type=nonsynonymous
SNP	2009	1305	REL606	3865067	C	aa_new_seq=C	aa_position=300	aa_ref_seq=F	codon_new_seq=TGC	codon_position=2	codon_ref_seq=TTC	gene_list=bglF	gene_name=bglF	gene_position=899	gene_product=fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component	gene_strand=<	locus_tag=ECB_03606	snp_type=nonsynonymous
INS	2010	1306	REL606	3875632	T	gene_name=glmU/atpC	gene_position=intergenic (-66/+287)	gene_product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon	locus_tag=ECB_03614/ECB_03615	snp_type=intergenic
SNP	2011	1307	REL606	3886222	C	gene_name=gidA/mioC	gene_position=intergenic (-228/+151)	gene_product=glucose-inhibited division protein A/flavodoxin	locus_tag=ECB_03625/ECB_03626	snp_type=intergenic
INS	2012	1308,1309	REL606	3893551	GG	gene_name=kup/insJ-5	gene_position=intergenic (+6/-50)	gene_product=potassium transporter/IS150 hypothetical protein	locus_tag=ECB_03631/ECB_03632	snp_type=intergenic
DEL	1487	1314,26	REL606	3894997	6934	gene_name=rbsD–[yieO]	gene_product=rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]	locus_tag=[ECB_03634]–[ECB_03640]	mediated=IS150
SNP	2013	1318	REL606	3911660	C	aa_new_seq=*	aa_position=47	aa_ref_seq=L	codon_new_seq=TGA	codon_position=2	codon_ref_seq=TTA	gene_list=yifB	gene_name=yifB	gene_position=140	gene_product=predicted bifunctional enzyme and transcriptional regulator	gene_strand=<	locus_tag=ECB_03644	snp_type=nonsynonymous
SNP	2014	1319	REL606	3917503	G	aa_new_seq=C	aa_position=124	aa_ref_seq=F	codon_new_seq=TGC	codon_position=2	codon_ref_seq=TTC	gene_list=ilvA	gene_name=ilvA	gene_position=371	gene_product=threonine dehydratase	gene_strand=>	locus_tag=ECB_03650	snp_type=nonsynonymous
SNP	2015	1320	REL606	3922213	C	gene_list=yifN	gene_name=yifN	gene_position=pseudogene (50/219 nt)	gene_product=b3777; conserved protein	gene_strand=<	locus_tag=ECB_03655	snp_type=pseudogene
SNP	2016	1321	REL606	3923571	C	aa_new_seq=H	aa_position=365	aa_ref_seq=N	codon_new_seq=CAC	codon_position=1	codon_ref_seq=AAC	gene_list=rep	gene_name=rep	gene_position=1093	gene_product=DNA helicase and single-stranded DNA-dependent ATPase	gene_strand=>	locus_tag=ECB_03656	snp_type=nonsynonymous
SNP	2017	1322	REL606	3930609	G	aa_new_seq=M	aa_position=298	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=rfe	gene_name=rfe	gene_position=894	gene_product=UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase	gene_strand=>	locus_tag=ECB_03662	snp_type=nonsynonymous
SNP	2018	1323	REL606	3932175	G	aa_new_seq=M	aa_position=81	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=wecB	gene_name=wecB	gene_position=243	gene_product=UDP-N-acetyl glucosamine-2-epimerase	gene_strand=>	locus_tag=ECB_03664	snp_type=nonsynonymous
SNP	2019	1324	REL606	3934468	C	aa_new_seq=H	aa_position=49	aa_ref_seq=Q	codon_new_seq=CAC	codon_position=3	codon_ref_seq=CAA	gene_list=rffG	gene_name=rffG	gene_position=147	gene_product=dTDP-glucose 4,6-dehydratase	gene_strand=>	locus_tag=ECB_03666	snp_type=nonsynonymous
SNP	2020	1325	REL606	3936513	C	aa_new_seq=R	aa_position=40	aa_ref_seq=S	codon_new_seq=CGC	codon_position=1	codon_ref_seq=AGC	gene_list=wecD	gene_name=wecD	gene_position=118	gene_product=TDP-fucosamine acetyltransferase	gene_strand=>	locus_tag=ECB_03668	snp_type=nonsynonymous
SNP	2021	1326	REL606	3942051	C	aa_new_seq=A	aa_position=99	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=wecG	gene_name=wecG	gene_position=296	gene_product=putative UDP-N-acetyl-D-mannosaminuronic acid transferase	gene_strand=>	locus_tag=ECB_03673	snp_type=nonsynonymous
SNP	2022	1328	REL606	3945610	G	aa_new_seq=A	aa_position=285	aa_ref_seq=S	codon_new_seq=GCG	codon_position=1	codon_ref_seq=TCG	gene_list=aslB	gene_name=aslB	gene_position=853	gene_product=predicted regulator of arylsulfatase activity	gene_strand=>	locus_tag=ECB_03675	snp_type=nonsynonymous
SNP	2023	1329	REL606	3945896	C	aa_new_seq=P	aa_position=380	aa_ref_seq=H	codon_new_seq=CCT	codon_position=2	codon_ref_seq=CAT	gene_list=aslB	gene_name=aslB	gene_position=1139	gene_product=predicted regulator of arylsulfatase activity	gene_strand=>	locus_tag=ECB_03675	snp_type=nonsynonymous
SNP	2024	1331	REL606	3955552	G	gene_name=cyaA/cyaY	gene_position=intergenic (+23/+17)	gene_product=adenylate cyclase/frataxin-like protein	locus_tag=ECB_03681/ECB_03682	snp_type=intergenic
SNP	2025	1332	REL606	3962760	G	aa_new_seq=D	aa_position=60	aa_ref_seq=E	codon_new_seq=GAC	codon_position=3	codon_ref_seq=GAA	gene_list=ECB_03690	gene_name=ECB_03690	gene_position=180	gene_product=conserved hypothetical protein	gene_strand=<	locus_tag=ECB_03690	snp_type=nonsynonymous
SNP	2026	1333	REL606	3963863	G	gene_name=yigE/corA	gene_position=intergenic (-77/-293)	gene_product=hypothetical protein/magnesium/nickel/cobalt transporter	locus_tag=ECB_03691/ECB_03692	snp_type=intergenic
SNP	2027	1336	REL606	3966983	G	aa_new_seq=L	aa_position=84	aa_ref_seq=L	codon_new_seq=CTC	codon_position=3	codon_ref_seq=CTA	gene_list=yigF	gene_name=yigF	gene_position=252	gene_product=conserved inner membrane protein	gene_strand=<	locus_tag=ECB_03696	snp_type=synonymous
SNP	2028	1337	REL606	3968103	G	aa_new_seq=L	aa_position=171	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=rarD	gene_name=rarD	gene_position=511	gene_product=predicted chloramphenical resistance permease	gene_strand=<	locus_tag=ECB_03698	snp_type=nonsynonymous
SNP	2029	1338	REL606	3968307	G	aa_new_seq=R	aa_position=103	aa_ref_seq=S	codon_new_seq=CGC	codon_position=1	codon_ref_seq=AGC	gene_list=rarD	gene_name=rarD	gene_position=307	gene_product=predicted chloramphenical resistance permease	gene_strand=<	locus_tag=ECB_03698	snp_type=nonsynonymous
SNP	2030	1339	REL606	3969200	G	gene_name=yigI/pldA	gene_position=intergenic (-68/-97)	gene_product=hypothetical protein/outer membrane phospholipase A	locus_tag=ECB_03699/ECB_03700	snp_type=intergenic
SNP	2031	1340	REL606	3970954	C	aa_new_seq=Q	aa_position=224	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=recQ	gene_name=recQ	gene_position=670	gene_product=ATP-dependent DNA helicase	gene_strand=>	locus_tag=ECB_03701	snp_type=nonsynonymous
SNP	2032	1341	REL606	3976831	G	aa_new_seq=A	aa_position=138	aa_ref_seq=E	codon_new_seq=GCG	codon_position=2	codon_ref_seq=GAG	gene_list=metR	gene_name=metR	gene_position=413	gene_product=DNA-binding transcriptional activator, homocysteine-binding	gene_strand=<	locus_tag=ECB_03707	snp_type=nonsynonymous
SNP	2033	1342	REL606	3984539	T	aa_new_seq=Q	aa_position=117	aa_ref_seq=P	codon_new_seq=CAG	codon_position=2	codon_ref_seq=CCG	gene_list=ECB_03713	gene_name=ECB_03713	gene_position=350	gene_product=conserved hypothetical protein	gene_strand=<	locus_tag=ECB_03713	snp_type=nonsynonymous
SNP	2034	1343	REL606	3992033	C	aa_new_seq=C	aa_position=43	aa_ref_seq=F	codon_new_seq=TGT	codon_position=2	codon_ref_seq=TTT	gene_list=ECB_03720	gene_name=ECB_03720	gene_position=128	gene_product=conserved hypothetical protein	gene_strand=<	locus_tag=ECB_03720	snp_type=nonsynonymous
SNP	2035	1344	REL606	3992619	G	aa_new_seq=T	aa_position=177	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=ECB_03721	gene_name=ECB_03721	gene_position=530	gene_product=conserved hypothetical protein	gene_strand=<	locus_tag=ECB_03721	snp_type=nonsynonymous
SNP	2036	1345	REL606	3994424	G	aa_new_seq=M	aa_position=125	aa_ref_seq=M	codon_new_seq=CTG	codon_position=1	codon_ref_seq=ATG	gene_list=ECB_03723	gene_name=ECB_03723	gene_position=373	gene_product=putative conserved protein	gene_strand=<	locus_tag=ECB_03723	snp_type=synonymous
SNP	2037	1346	REL606	3995913	C	aa_new_seq=A	aa_position=37	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=yigN	gene_name=yigN	gene_position=110	gene_product=predicted recombination limiting protein	gene_strand=>	locus_tag=ECB_03725	snp_type=nonsynonymous
SNP	2038	1347	REL606	3998776	C	aa_new_seq=T	aa_position=27	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=ubiB	gene_name=ubiB	gene_position=80	gene_product=putative ubiquinone biosynthesis protein UbiB	gene_strand=>	locus_tag=ECB_03728	snp_type=nonsynonymous
SNP	2039	1348	REL606	3998959	C	aa_new_seq=A	aa_position=88	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=ubiB	gene_name=ubiB	gene_position=263	gene_product=putative ubiquinone biosynthesis protein UbiB	gene_strand=>	locus_tag=ECB_03728	snp_type=nonsynonymous
SNP	2040	1349	REL606	4011464	C	aa_new_seq=F	aa_position=200	aa_ref_seq=L	codon_new_seq=TTC	codon_position=3	codon_ref_seq=TTA	gene_list=yigZ	gene_name=yigZ	gene_position=600	gene_product=predicted elongation factor	gene_strand=>	locus_tag=ECB_03739	snp_type=nonsynonymous
SNP	2041	1351	REL606	4013609	C	gene_name=hemG/rrsA	gene_position=intergenic (+83/-295)	gene_product=protoporphyrin oxidase, flavoprotein/16S ribosomal RNA	locus_tag=ECB_03741/ECB_r00014	snp_type=intergenic
SNP	2042	1359	REL606	4027844	G	aa_new_seq=S	aa_position=861	aa_ref_seq=I	codon_new_seq=AGT	codon_position=2	codon_ref_seq=ATT	gene_list=polA	gene_name=polA	gene_position=2582	gene_product=DNA polymerase I	gene_strand=>	locus_tag=ECB_03749	snp_type=nonsynonymous
SNP	2043	1360	REL606	4029063	C	gene_name=yihA/yihI	gene_position=intergenic (-37/-581)	gene_product=GTP-binding protein/hypothetical protein	locus_tag=ECB_03750/ECB_03751	snp_type=intergenic
SNP	2044	1361	REL606	4038134	G	aa_new_seq=S	aa_position=490	aa_ref_seq=S	codon_new_seq=TCG	codon_position=3	codon_ref_seq=TCT	gene_list=bipA	gene_name=bipA	gene_position=1470	gene_product=GTP-binding protein	gene_strand=>	locus_tag=ECB_03756	snp_type=synonymous
SNP	2045	1362	REL606	4039222	C	aa_new_seq=T	aa_position=173	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=yihL	gene_name=yihL	gene_position=518	gene_product=predicted DNA-binding transcriptional regulator	gene_strand=>	locus_tag=ECB_03757	snp_type=nonsynonymous
SNP	2046	1363	REL606	4058501	G	aa_new_seq=A	aa_position=292	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=fdhE	gene_name=fdhE	gene_position=875	gene_product=formate dehydrogenase accessory protein FdhE	gene_strand=<	locus_tag=ECB_03776	snp_type=nonsynonymous
SNP	2047	1365	REL606	4064362	G	aa_new_seq=R	aa_position=67	aa_ref_seq=L	codon_new_seq=CGC	codon_position=2	codon_ref_seq=CTC	gene_list=fdhD	gene_name=fdhD	gene_position=200	gene_product=formate dehydrogenase accessory protein	gene_strand=>	locus_tag=ECB_03780	snp_type=nonsynonymous
SNP	2048	1366	REL606	4070289	C	aa_new_seq=E	aa_position=75	aa_ref_seq=D	codon_new_seq=GAG	codon_position=3	codon_ref_seq=GAT	gene_list=frvB	gene_name=frvB	gene_position=225	gene_product=fused predicted PTS enzymes: IIB component/IIC component	gene_strand=<	locus_tag=ECB_03784	snp_type=nonsynonymous
SNP	2049	1367	REL606	4070711	G	aa_new_seq=T	aa_position=87	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=frvA	gene_name=frvA	gene_position=260	gene_product=predicted enzyme IIA component of PTS	gene_strand=<	locus_tag=ECB_03785	snp_type=nonsynonymous
SNP	2050	1368	REL606	4070746	G	aa_new_seq=V	aa_position=75	aa_ref_seq=V	codon_new_seq=GTC	codon_position=3	codon_ref_seq=GTA	gene_list=frvA	gene_name=frvA	gene_position=225	gene_product=predicted enzyme IIA component of PTS	gene_strand=<	locus_tag=ECB_03785	snp_type=synonymous
SNP	2051	1369	REL606	4073894	G	aa_new_seq=T	aa_position=46	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=rhaD	gene_name=rhaD	gene_position=137	gene_product=rhamnulose-1-phosphate aldolase	gene_strand=<	locus_tag=ECB_03788	snp_type=nonsynonymous
SNP	2052	1370	REL606	4073906	C	aa_new_seq=S	aa_position=42	aa_ref_seq=I	codon_new_seq=AGC	codon_position=2	codon_ref_seq=ATC	gene_list=rhaD	gene_name=rhaD	gene_position=125	gene_product=rhamnulose-1-phosphate aldolase	gene_strand=<	locus_tag=ECB_03788	snp_type=nonsynonymous
SNP	2053	1371	REL606	4075029	G	aa_new_seq=P	aa_position=148	aa_ref_seq=T	codon_new_seq=CCG	codon_position=1	codon_ref_seq=ACG	gene_list=rhaA	gene_name=rhaA	gene_position=442	gene_product=L-rhamnose isomerase	gene_strand=<	locus_tag=ECB_03789	snp_type=nonsynonymous
SNP	2054	1372	REL606	4078976	C	aa_new_seq=Y	aa_position=313	aa_ref_seq=*	codon_new_seq=TAC	codon_position=3	codon_ref_seq=TAA	gene_list=rhaR	gene_name=rhaR	gene_position=939	gene_product=DNA-binding transcriptional activator, L-rhamnose-binding	gene_strand=>	locus_tag=ECB_03792	snp_type=nonsynonymous
SNP	2055	1373	REL606	4081115	C	gene_name=sodA/kdgT	gene_position=intergenic (+203/-57)	gene_product=superoxide dismutase, Mn/2-keto-3-deoxygluconate permease	locus_tag=ECB_03794/ECB_03795	snp_type=intergenic
SNP	2056	1374	REL606	4089472	C	aa_new_seq=L	aa_position=21	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=cdh	gene_name=cdh	gene_position=61	gene_product=CDP-diacylglycerol pyrophosphatase	gene_strand=>	locus_tag=ECB_03803	snp_type=nonsynonymous
SNP	2057	1375	REL606	4089879	C	aa_new_seq=N	aa_position=156	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=cdh	gene_name=cdh	gene_position=468	gene_product=CDP-diacylglycerol pyrophosphatase	gene_strand=>	locus_tag=ECB_03803	snp_type=nonsynonymous
SNP	2058	1376	REL606	4096930	C	aa_new_seq=G	aa_position=215	aa_ref_seq=W	codon_new_seq=GGG	codon_position=1	codon_ref_seq=TGG	gene_list=glpF	gene_name=glpF	gene_position=643	gene_product=glycerol facilitator	gene_strand=<	locus_tag=ECB_03812	snp_type=nonsynonymous
SNP	2059	1377	REL606	4100655	T	aa_new_seq=I	aa_position=192	aa_ref_seq=M	codon_new_seq=ATA	codon_position=3	codon_ref_seq=ATG	gene_list=hslU	gene_name=hslU	gene_position=576	gene_product=ATP-dependent protease ATP-binding subunit	gene_strand=<	locus_tag=ECB_03816	snp_type=nonsynonymous
SNP	2060	1378	REL606	4102718	C	aa_new_seq=A	aa_position=35	aa_ref_seq=A	codon_new_seq=GCG	codon_position=3	codon_ref_seq=GCT	gene_list=ftsN	gene_name=ftsN	gene_position=105	gene_product=essential cell division protein	gene_strand=<	locus_tag=ECB_03818	snp_type=synonymous
SNP	2061	1379	REL606	4116720	G	aa_new_seq=S	aa_position=169	aa_ref_seq=I	codon_new_seq=AGT	codon_position=2	codon_ref_seq=ATT	gene_list=yijE	gene_name=yijE	gene_position=506	gene_product=predicted permease	gene_strand=>	locus_tag=ECB_03829	snp_type=nonsynonymous
SNP	2062	1380	REL606	4118298	G	aa_new_seq=P	aa_position=282	aa_ref_seq=Q	codon_new_seq=CCG	codon_position=2	codon_ref_seq=CAG	gene_list=gldA	gene_name=gldA	gene_position=845	gene_product=glycerol dehydrogenase	gene_strand=<	locus_tag=ECB_03831	snp_type=nonsynonymous
SNP	2063	1381	REL606	4121449	G	aa_new_seq=Q	aa_position=294	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=ptsA	gene_name=ptsA	gene_position=880	gene_product=fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component	gene_strand=<	locus_tag=ECB_03833	snp_type=nonsynonymous
DEL	2064	1382	REL606	4126706	1	gene_list=pflC	gene_name=pflC	gene_position=coding (342/879 nt)	gene_product=pyruvate formate lyase II activase	gene_strand=>	locus_tag=ECB_03837
SNP	2065	1383	REL606	4139889	G	aa_new_seq=Q	aa_position=255	aa_ref_seq=K	codon_new_seq=CAG	codon_position=1	codon_ref_seq=AAG	gene_list=udhA	gene_name=udhA	gene_position=763	gene_product=soluble pyridine nucleotide transhydrogenase	gene_strand=<	locus_tag=ECB_03847	snp_type=nonsynonymous
SNP	2066	1384	REL606	4142501	G	aa_new_seq=Q	aa_position=211	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=trmA	gene_name=trmA	gene_position=631	gene_product=tRNA (uracil-5-)-methyltransferase	gene_strand=<	locus_tag=ECB_03850	snp_type=nonsynonymous
SNP	2067	1398	REL606	4156805	G	gene_name=tuf/secE	gene_position=intergenic (+66/-164)	gene_product=protein chain elongation factor EF-Tu (duplicate of tufA)/translocase	locus_tag=ECB_03856/ECB_03857	snp_type=intergenic
SNP	2068	1399	REL606	4163173	G	aa_new_seq=R	aa_position=773	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=rpoB	gene_name=rpoB	gene_position=2318	gene_product=DNA-directed RNA polymerase subunit beta	gene_strand=>	locus_tag=ECB_03863	snp_type=nonsynonymous
SNP	2069	1400	REL606	4166668	C	aa_new_seq=Q	aa_position=570	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=rpoC	gene_name=rpoC	gene_position=1708	gene_product=DNA-directed RNA polymerase subunit beta'	gene_strand=>	locus_tag=ECB_03864	snp_type=nonsynonymous
SNP	2070	1401	REL606	4175612	C	aa_new_seq=M	aa_position=33	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=thiC	gene_name=thiC	gene_position=99	gene_product=thiamine biosynthesis protein ThiC	gene_strand=<	locus_tag=ECB_03871	snp_type=nonsynonymous
SNP	2071	1402	REL606	4180045	C	aa_new_seq=N	aa_position=51	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=hupA	gene_name=hupA	gene_position=153	gene_product=HU, DNA-binding transcriptional regulator, alpha subunit	gene_strand=>	locus_tag=ECB_03877	snp_type=nonsynonymous
DEL	2072	1403	REL606	4180211	1	gene_list=yjaH	gene_name=yjaH	gene_position=coding (34/696 nt)	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_03878
SNP	2073	1404	REL606	4180803	C	aa_new_seq=A	aa_position=209	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=yjaH	gene_name=yjaH	gene_position=626	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_03878	snp_type=nonsynonymous
SNP	2074	1412	REL606	4201911	T	aa_new_seq=T	aa_position=217	aa_ref_seq=A	codon_new_seq=ACG	codon_position=1	codon_ref_seq=GCG	gene_list=iclR	gene_name=iclR	gene_position=649	gene_product=DNA-binding transcriptional repressor	gene_strand=<	locus_tag=ECB_03890	snp_type=nonsynonymous
SNP	2075	1413	REL606	4202859	C	aa_new_seq=A	aa_position=34	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=metH	gene_name=metH	gene_position=101	gene_product=B12-dependent methionine synthase	gene_strand=>	locus_tag=ECB_03891	snp_type=nonsynonymous
SNP	2076	1414	REL606	4225047	C	aa_new_seq=W	aa_position=102	aa_ref_seq=L	codon_new_seq=TGG	codon_position=2	codon_ref_seq=TTG	gene_list=malE	gene_name=malE	gene_position=305	gene_product=maltose ABC transporter periplasmic protein	gene_strand=<	locus_tag=ECB_03906	snp_type=nonsynonymous
SNP	2077	1415	REL606	4227464	G	aa_new_seq=D	aa_position=188	aa_ref_seq=Y	codon_new_seq=GAT	codon_position=1	codon_ref_seq=TAT	gene_list=lamB	gene_name=lamB	gene_position=562	gene_product=maltoporin precursor	gene_strand=>	locus_tag=ECB_03908	snp_type=nonsynonymous
SNP	2078	1416	REL606	4230064	G	aa_new_seq=G	aa_position=60	aa_ref_seq=C	codon_new_seq=GGC	codon_position=1	codon_ref_seq=TGC	gene_list=yjbI	gene_name=yjbI	gene_position=178	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_03910	snp_type=nonsynonymous
SNP	2079	1417	REL606	4240745	G	aa_new_seq=A	aa_position=49	aa_ref_seq=S	codon_new_seq=GCC	codon_position=1	codon_ref_seq=TCC	gene_list=yjbN	gene_name=yjbN	gene_position=145	gene_product=tRNA-dihydrouridine synthase A	gene_strand=>	locus_tag=ECB_03921	snp_type=nonsynonymous
SNP	2080	1418	REL606	4248845	G	aa_new_seq=C	aa_position=167	aa_ref_seq=F	codon_new_seq=TGT	codon_position=2	codon_ref_seq=TTT	gene_list=aphA	gene_name=aphA	gene_position=500	gene_product=acid phosphatase/phosphotransferase, class B, non-specific	gene_strand=>	locus_tag=ECB_03927	snp_type=nonsynonymous
SNP	2081	1419	REL606	4262744	C	aa_new_seq=A	aa_position=364	aa_ref_seq=A	codon_new_seq=GCG	codon_position=3	codon_ref_seq=GCT	gene_list=actP	gene_name=actP	gene_position=1092	gene_product=acetate permease	gene_strand=<	locus_tag=ECB_03939	snp_type=synonymous
SNP	2082	1420	REL606	4272929	G	aa_new_seq=A	aa_position=152	aa_ref_seq=S	codon_new_seq=GCC	codon_position=1	codon_ref_seq=TCC	gene_list=nrfG	gene_name=nrfG	gene_position=454	gene_product=heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG	gene_strand=>	locus_tag=ECB_03948	snp_type=nonsynonymous
SNP	2083	1423	REL606	4283162	C	gene_name=yjcR/yjcS	gene_position=intergenic (-231/+272)	gene_product=predicted membrane fusion protein of efflux pump/predicted alkyl sulfatase	locus_tag=ECB_03954/ECB_03955	snp_type=intergenic
SNP	2084	1424	REL606	4292123	C	gene_name=rpiR/rpiB	gene_position=intergenic (-310/-49)	gene_product=DNA-binding transcriptional repressor/ribose-5-phosphate isomerase B	locus_tag=ECB_03961/ECB_03962	snp_type=intergenic
SNP	2085	1425	REL606	4296969	G	aa_new_seq=F	aa_position=206	aa_ref_seq=L	codon_new_seq=TTC	codon_position=3	codon_ref_seq=TTA	gene_list=phnK	gene_name=phnK	gene_position=618	gene_product=carbon-phosphorus lyase complex subunit	gene_strand=<	locus_tag=ECB_03969	snp_type=nonsynonymous
SNP	2086	1430	REL606	4311978	C	aa_new_seq=L	aa_position=3	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=basS	gene_name=basS	gene_position=9	gene_product=sensory histidine kinase in two-component regulatory system with BasR	gene_strand=<	locus_tag=ECB_03983	snp_type=nonsynonymous
SNP	2087	1431	REL606	4332868	C	aa_new_seq=M	aa_position=190	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=lysU	gene_name=lysU	gene_position=570	gene_product=lysine tRNA synthetase, inducible	gene_strand=<	locus_tag=ECB_04000	snp_type=nonsynonymous
SNP	2088	1433	REL606	4350624	C	aa_new_seq=A	aa_position=293	aa_ref_seq=A	codon_new_seq=GCC	codon_position=3	codon_ref_seq=GCA	gene_list=groEL	gene_name=groEL	gene_position=879	gene_product=chaperonin GroEL	gene_strand=>	locus_tag=ECB_04013	snp_type=synonymous
SNP	2089	1434	REL606	4353840	C	aa_new_seq=G	aa_position=177	aa_ref_seq=W	codon_new_seq=GGG	codon_position=1	codon_ref_seq=TGG	gene_list=yjeK	gene_name=yjeK	gene_position=529	gene_product=predicted lysine aminomutase	gene_strand=<	locus_tag=ECB_04016	snp_type=nonsynonymous
SNP	2090	1438	REL606	4388311	C	aa_new_seq=L	aa_position=8	aa_ref_seq=L	codon_new_seq=CTC	codon_position=3	codon_ref_seq=CTA	gene_list=yjfI	gene_name=yjfI	gene_position=24	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_04048	snp_type=synonymous
SNP	2091	1439	REL606	4391658	G	aa_new_seq=R	aa_position=159	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=yjfC	gene_name=yjfC	gene_position=476	gene_product=predicted synthetase/amidase	gene_strand=>	locus_tag=ECB_04053	snp_type=nonsynonymous
SNP	2092	1440	REL606	4392506	A	aa_new_seq=E	aa_position=26	aa_ref_seq=A	codon_new_seq=GAG	codon_position=2	codon_ref_seq=GCG	gene_list=aidB	gene_name=aidB	gene_position=77	gene_product=isovaleryl CoA dehydrogenase	gene_strand=>	locus_tag=ECB_04054	snp_type=nonsynonymous
SNP	2093	1441	REL606	4403583	C	aa_new_seq=T	aa_position=104	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=rpsF	gene_name=rpsF	gene_position=311	gene_product=30S ribosomal protein S6	gene_strand=>	locus_tag=ECB_04067	snp_type=nonsynonymous
SNP	2094	1442	REL606	4404811	G	gene_name=rplI/ECB_04071	gene_position=intergenic (+99/+3)	gene_product=50S ribosomal protein L9/Hexuronate transporter	locus_tag=ECB_04070/ECB_04071	snp_type=intergenic
SNP	2095	1443	REL606	4405984	C	aa_new_seq=M	aa_position=36	aa_ref_seq=I	codon_new_seq=ATG	codon_position=3	codon_ref_seq=ATT	gene_list=ECB_04071	gene_name=ECB_04071	gene_position=108	gene_product=Hexuronate transporter	gene_strand=<	locus_tag=ECB_04071	snp_type=nonsynonymous
SNP	2096	1444	REL606	4412016	G	aa_new_seq=P	aa_position=73	aa_ref_seq=H	codon_new_seq=CCT	codon_position=2	codon_ref_seq=CAT	gene_list=ECB_04076	gene_name=ECB_04076	gene_position=218	gene_product=putative oxoacyl reductase	gene_strand=<	locus_tag=ECB_04076	snp_type=nonsynonymous
SNP	2097	1445	REL606	4414202	C	aa_new_seq=A	aa_position=90	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=fklB	gene_name=fklB	gene_position=269	gene_product=FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)	gene_strand=>	locus_tag=ECB_04079	snp_type=nonsynonymous
SNP	2098	1446	REL606	4425276	G	gene_name=ytfL/msrA	gene_position=intergenic (-304/+19)	gene_product=predicted inner membrane protein/methionine sulfoxide reductase A	locus_tag=ECB_04089/ECB_04090	snp_type=intergenic
SNP	2099	1447	REL606	4435204	G	aa_new_seq=R	aa_position=299	aa_ref_seq=R	codon_new_seq=CGG	codon_position=3	codon_ref_seq=CGT	gene_list=ytfR	gene_name=ytfR	gene_position=897	gene_product=predicted sugar transporter subunit: ATP-binding component of ABC superfamily	gene_strand=>	locus_tag=ECB_04097	snp_type=synonymous
SNP	2100	1448	REL606	4446077	G	gene_name=nrdD/treC	gene_position=intergenic (-140/+254)	gene_product=anaerobic ribonucleoside triphosphate reductase/trehalose-6-P hydrolase	locus_tag=ECB_04106/ECB_04107	snp_type=intergenic
SNP	2101	1449	REL606	4448669	T	aa_new_seq=P	aa_position=263	aa_ref_seq=P	codon_new_seq=CCA	codon_position=3	codon_ref_seq=CCC	gene_list=treB	gene_name=treB	gene_position=789	gene_product=fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component	gene_strand=<	locus_tag=ECB_04108	snp_type=synonymous
SNP	2102	1450	REL606	4455062	G	aa_new_seq=A	aa_position=204	aa_ref_seq=D	codon_new_seq=GCT	codon_position=2	codon_ref_seq=GAT	gene_list=pyrB	gene_name=pyrB	gene_position=611	gene_product=aspartate carbamoyltransferase catalytic subunit	gene_strand=<	locus_tag=ECB_04113	snp_type=nonsynonymous
SNP	2103	1451	REL606	4466019	C	aa_new_seq=L	aa_position=284	aa_ref_seq=F	codon_new_seq=TTG	codon_position=3	codon_ref_seq=TTT	gene_list=valS	gene_name=valS	gene_position=852	gene_product=valyl-tRNA synthetase	gene_strand=<	locus_tag=ECB_04124	snp_type=nonsynonymous
SNP	2104	1452	REL606	4466781	G	aa_new_seq=D	aa_position=30	aa_ref_seq=E	codon_new_seq=GAC	codon_position=3	codon_ref_seq=GAA	gene_list=valS	gene_name=valS	gene_position=90	gene_product=valyl-tRNA synthetase	gene_strand=<	locus_tag=ECB_04124	snp_type=nonsynonymous
SNP	2105	1453	REL606	4487389	G	aa_new_seq=D	aa_position=71	aa_ref_seq=Y	codon_new_seq=GAT	codon_position=1	codon_ref_seq=TAT	gene_list=yjhC	gene_name=yjhC	gene_position=211	gene_product=predicted oxidoreductase	gene_strand=>	locus_tag=ECB_04142	snp_type=nonsynonymous
SNP	2106	1455	REL606	4490493	G	aa_new_seq=*	aa_position=41	aa_ref_seq=L	codon_new_seq=TGA	codon_position=2	codon_ref_seq=TTA	gene_list=ECB_04147	gene_name=ECB_04147	gene_position=122	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_04147	snp_type=nonsynonymous
SNP	2107	1456	REL606	4490502	G	aa_new_seq=S	aa_position=44	aa_ref_seq=I	codon_new_seq=AGT	codon_position=2	codon_ref_seq=ATT	gene_list=ECB_04147	gene_name=ECB_04147	gene_position=131	gene_product=hypothetical protein	gene_strand=>	locus_tag=ECB_04147	snp_type=nonsynonymous
SNP	2108	1458	REL606	4498025	G	aa_new_seq=A	aa_position=139	aa_ref_seq=A	codon_new_seq=GCC	codon_position=3	codon_ref_seq=GCA	gene_list=fecC	gene_name=fecC	gene_position=417	gene_product=iron-dicitrate transporter subunit	gene_strand=<	locus_tag=ECB_04155	snp_type=synonymous
SNP	2109	1460	REL606	4511435	C	aa_new_seq=A	aa_position=119	aa_ref_seq=S	codon_new_seq=GCC	codon_position=1	codon_ref_seq=TCC	gene_list=sgcX	gene_name=sgcX	gene_position=355	gene_product=predicted endoglucanase with Zn-dependent exopeptidase domain	gene_strand=<	locus_tag=ECB_04171	snp_type=nonsynonymous
MOB	1494	6,5	REL606	4524522	IS186	1	6	gene_list=fimA	gene_name=fimA	gene_position=coding (494-499/549 nt)	gene_product=major type 1 subunit fimbrin (pilin)	gene_strand=>	locus_tag=ECB_04183
SNP	2110	1462	REL606	4526771	C	aa_new_seq=I	aa_position=254	aa_ref_seq=I	codon_new_seq=ATC	codon_position=3	codon_ref_seq=ATA	gene_list=fimD	gene_name=fimD	gene_position=762	gene_product=outer membrane usher protein, type 1 fimbrial synthesis	gene_strand=>	locus_tag=ECB_04186	snp_type=synonymous
SNP	2111	1463	REL606	4530188	C	aa_new_seq=T	aa_position=156	aa_ref_seq=N	codon_new_seq=ACC	codon_position=2	codon_ref_seq=AAC	gene_list=fimH	gene_name=fimH	gene_position=467	gene_product=minor component of type 1 fimbriae	gene_strand=>	locus_tag=ECB_04189	snp_type=nonsynonymous
SNP	2112	1464	REL606	4531921	C	aa_new_seq=R	aa_position=97	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=gntP	gene_name=gntP	gene_position=290	gene_product=fructuronate transporter	gene_strand=<	locus_tag=ECB_04190	snp_type=nonsynonymous
SNP	2113	1465	REL606	4534381	G	aa_new_seq=R	aa_position=189	aa_ref_seq=R	codon_new_seq=CGG	codon_position=3	codon_ref_seq=CGT	gene_list=uxuB	gene_name=uxuB	gene_position=567	gene_product=D-mannonate oxidoreductase, NAD-binding	gene_strand=>	locus_tag=ECB_04192	snp_type=synonymous
SNP	2114	1466	REL606	4544266	G	aa_new_seq=D	aa_position=120	aa_ref_seq=E	codon_new_seq=GAC	codon_position=3	codon_ref_seq=GAA	gene_list=yjiK	gene_name=yjiK	gene_position=360	gene_product=hypothetical protein	gene_strand=<	locus_tag=ECB_04202	snp_type=nonsynonymous
SNP	2115	1467	REL606	4545297	G	aa_new_seq=Q	aa_position=103	aa_ref_seq=K	codon_new_seq=CAA	codon_position=1	codon_ref_seq=AAA	gene_list=yjiL	gene_name=yjiL	gene_position=307	gene_product=predicted ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase	gene_strand=<	locus_tag=ECB_04203	snp_type=nonsynonymous
SNP	2116	1468	REL606	4547935	G	aa_new_seq=L	aa_position=76	aa_ref_seq=M	codon_new_seq=CTT	codon_position=1	codon_ref_seq=ATT	gene_list=yjiN	gene_name=yjiN	gene_position=226	gene_product=conserved inner membrane protein	gene_strand=<	locus_tag=ECB_04205	snp_type=nonsynonymous
SNP	2117	1470	REL606	4552312	G	gene_list=yjiV	gene_name=yjiV	gene_position=pseudogene (767/3255 nt)	gene_product=b4486; conserved protein	gene_strand=>	locus_tag=ECB_04210	snp_type=pseudogene
SNP	2118	1471	REL606	4560791	C	aa_new_seq=R	aa_position=78	aa_ref_seq=L	codon_new_seq=CGG	codon_position=2	codon_ref_seq=CTG	gene_list=hsdM	gene_name=hsdM	gene_position=233	gene_product=DNA methylase M	gene_strand=<	locus_tag=ECB_04215	snp_type=nonsynonymous
SNP	2119	1472	REL606	4562591	G	aa_new_seq=P	aa_position=716	aa_ref_seq=T	codon_new_seq=CCC	codon_position=1	codon_ref_seq=ACC	gene_list=hsdR	gene_name=hsdR	gene_position=2146	gene_product=endonuclease R	gene_strand=<	locus_tag=ECB_04216	snp_type=nonsynonymous
SNP	2120	1473	REL606	4570266	C	aa_new_seq=G	aa_position=492	aa_ref_seq=C	codon_new_seq=GGC	codon_position=1	codon_ref_seq=TGC	gene_list=hpaB	gene_name=hpaB	gene_position=1474	gene_product=4-hydroxyphenylacetate 3-monooxygenase	gene_strand=<	locus_tag=ECB_04222	snp_type=nonsynonymous
SNP	2121	1474	REL606	4577252	G	aa_new_seq=S	aa_position=17	aa_ref_seq=Y	codon_new_seq=TCT	codon_position=2	codon_ref_seq=TAT	gene_list=hpaD	gene_name=hpaD	gene_position=50	gene_product=Homoprotocatechuate dyoxygenase	gene_strand=<	locus_tag=ECB_04228	snp_type=nonsynonymous
SNP	2122	1475	REL606	4583243	G	aa_new_seq=H	aa_position=239	aa_ref_seq=N	codon_new_seq=CAT	codon_position=1	codon_ref_seq=AAT	gene_list=yjiZ	gene_name=yjiZ	gene_position=715	gene_product=predicted transporter	gene_strand=<	locus_tag=ECB_04233	snp_type=nonsynonymous
SNP	2123	1478	REL606	4598130	C	aa_new_seq=A	aa_position=84	aa_ref_seq=E	codon_new_seq=GCA	codon_position=2	codon_ref_seq=GAA	gene_list=yjjG	gene_name=yjjG	gene_position=251	gene_product=nucleotidase	gene_strand=>	locus_tag=ECB_04249	snp_type=nonsynonymous
SNP	2124	1479	REL606	4601064	C	aa_new_seq=N	aa_position=145	aa_ref_seq=K	codon_new_seq=AAC	codon_position=3	codon_ref_seq=AAA	gene_list=osmY	gene_name=osmY	gene_position=435	gene_product=periplasmic protein	gene_strand=>	locus_tag=ECB_04251	snp_type=nonsynonymous
SNP	2125	1482	REL606	4613809	C	aa_new_seq=T	aa_position=234	aa_ref_seq=K	codon_new_seq=ACA	codon_position=2	codon_ref_seq=AAA	gene_list=serB	gene_name=serB	gene_position=701	gene_product=3-phosphoserine phosphatase	gene_strand=>	locus_tag=ECB_04264	snp_type=nonsynonymous
SNP	2126	1483	REL606	4616396	A	aa_new_seq=S	aa_position=290	aa_ref_seq=G	codon_new_seq=AGC	codon_position=1	codon_ref_seq=GGC	gene_list=nadR	gene_name=nadR	gene_position=868	gene_product=nicotinamide-nucleotide adenylyltransferase	gene_strand=>	locus_tag=ECB_04266	snp_type=nonsynonymous
SNP	2127	1484	REL606	4628873	G	gene_name=yjjY/lasT	gene_position=intergenic (+171/-229)	gene_product=hypothetical protein/predicted rRNA methyltransferase	locus_tag=ECB_04278/ECB_04279	snp_type=intergenic
RA	311		REL606	1615	0	T	G	frequency=1	new_cov=40/20	quality=163.5	ref_cov=0/0	tot_cov=40/20
RA	312		REL606	10269	0	A	C	frequency=1	new_cov=13/24	quality=92.7	ref_cov=0/0	tot_cov=13/24
RA	314		REL606	21936	0	T	G	frequency=1	new_cov=24/24	quality=132.6	ref_cov=0/0	tot_cov=24/24
RA	316		REL606	35850	0	A	C	frequency=1	new_cov=24/18	quality=109.4	ref_cov=0/0	tot_cov=24/18
RA	317		REL606	44151	0	T	G	frequency=1	new_cov=15/22	quality=99.9	ref_cov=0/0	tot_cov=15/22
RA	318		REL606	44865	0	A	C	frequency=1	new_cov=26/31	quality=153.4	ref_cov=0/0	tot_cov=27/31
RA	319		REL606	46353	0	T	C	frequency=1	new_cov=21/16	quality=96.1	ref_cov=0/0	tot_cov=21/16
RA	320		REL606	47721	0	C	A	frequency=1	new_cov=34/32	quality=180.2	ref_cov=0/0	tot_cov=34/32
RA	323		REL606	94003	0	G	T	frequency=1	new_cov=22/40	quality=171.1	ref_cov=0/0	tot_cov=23/40
RA	324		REL606	98071	0	T	G	frequency=1	new_cov=25/22	quality=125.3	ref_cov=0/0	tot_cov=25/22
RA	325		REL606	100218	0	A	C	frequency=1	new_cov=31/24	quality=146.1	ref_cov=0/0	tot_cov=31/25
RA	326		REL606	114034	1	.	C	frequency=1	new_cov=12/13	quality=48.4	ref_cov=3/1	tot_cov=15/14
RA	327		REL606	125265	0	A	C	frequency=1	new_cov=30/36	quality=169.3	ref_cov=0/0	tot_cov=30/38
RA	328		REL606	125630	0	T	G	frequency=1	new_cov=27/28	quality=147.2	ref_cov=0/0	tot_cov=27/28
RA	329		REL606	136422	0	A	C	frequency=1	new_cov=30/34	quality=176.0	ref_cov=0/0	tot_cov=30/34
RA	330		REL606	139321	0	T	G	frequency=1	new_cov=20/36	quality=142.7	ref_cov=0/0	tot_cov=20/36
RA	331		REL606	145773	0	A	C	frequency=1	new_cov=23/12	quality=91.1	ref_cov=0/0	tot_cov=24/12
RA	332		REL606	154388	0	A	C	frequency=1	new_cov=30/27	quality=153.1	ref_cov=0/0	tot_cov=31/27
RA	333		REL606	156770	0	A	C	frequency=1	new_cov=47/23	quality=191.0	ref_cov=0/0	tot_cov=48/23
RA	334		REL606	161041	0	T	G	frequency=1	new_cov=28/49	quality=210.5	ref_cov=0/0	tot_cov=28/50
RA	335		REL606	179508	0	T	G	frequency=1	new_cov=18/18	quality=87.7	ref_cov=0/0	tot_cov=18/18
RA	336		REL606	181491	0	T	G	frequency=1	new_cov=35/29	quality=179.3	ref_cov=0/0	tot_cov=35/29
RA	337		REL606	212537	0	T	G	frequency=1	new_cov=17/21	quality=104.1	ref_cov=0/0	tot_cov=17/21
RA	338		REL606	214405	0	A	C	frequency=1	new_cov=16/34	quality=125.6	ref_cov=0/0	tot_cov=17/34
RA	339		REL606	226275	0	A	C	frequency=1	new_cov=22/17	quality=107.5	ref_cov=0/0	tot_cov=22/17
RA	346		REL606	235495	0	T	G	frequency=1	new_cov=13/15	quality=75.3	ref_cov=0/0	tot_cov=13/15
RA	353		REL606	243156	0	A	C	frequency=1	new_cov=17/22	quality=101.2	ref_cov=0/0	tot_cov=18/22
RA	358		REL606	253813	0	A	C	frequency=1	new_cov=18/17	quality=95.2	ref_cov=1/0	tot_cov=19/17
RA	360		REL606	289049	0	C	A	frequency=1	new_cov=26/34	quality=163.5	ref_cov=1/0	tot_cov=27/36
RA	361		REL606	295469	0	T	G	frequency=1	new_cov=15/31	quality=125.4	ref_cov=0/0	tot_cov=15/31
RA	362		REL606	298983	0	T	G	frequency=1	new_cov=25/20	quality=116.6	ref_cov=0/0	tot_cov=25/20
RA	363		REL606	301762	0	A	C	frequency=1	new_cov=26/20	quality=125.8	ref_cov=0/0	tot_cov=26/21
RA	366		REL606	314518	0	A	C	frequency=1	new_cov=19/12	quality=83.4	ref_cov=0/0	tot_cov=19/12
RA	367		REL606	315566	0	A	C	frequency=1	new_cov=29/28	quality=127.6	ref_cov=0/3	tot_cov=29/31
RA	372		REL606	325864	0	A	C	frequency=1	new_cov=15/19	quality=84.9	ref_cov=0/1	tot_cov=15/20
RA	375		REL606	330492	0	T	G	frequency=1	new_cov=12/27	quality=105.6	ref_cov=0/0	tot_cov=12/27
RA	376		REL606	331559	0	T	G	frequency=1	new_cov=26/24	quality=134.3	ref_cov=0/1	tot_cov=26/25
RA	377		REL606	332612	0	T	G	frequency=1	new_cov=37/17	quality=137.1	ref_cov=0/0	tot_cov=38/18
RA	378		REL606	332980	0	T	G	frequency=1	new_cov=12/16	quality=73.0	ref_cov=0/0	tot_cov=12/16
RA	379		REL606	342446	0	A	C	frequency=1	new_cov=46/28	quality=201.2	ref_cov=0/0	tot_cov=46/28
RA	380		REL606	344430	0	T	G	frequency=1	new_cov=26/14	quality=107.9	ref_cov=0/0	tot_cov=26/14
RA	382		REL606	375815	0	G	T	frequency=1	new_cov=24/19	quality=115.5	ref_cov=0/0	tot_cov=24/20
RA	383		REL606	376997	0	A	C	frequency=1	new_cov=0/1	quality=-5.0	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	384		REL606	377000	0	T	G	frequency=1	new_cov=0/1	quality=-4.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	385		REL606	377006	0	T	G	frequency=1	new_cov=0/1	quality=-5.7	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	386		REL606	377017	0	C	G	frequency=1	new_cov=0/1	quality=-5.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	387		REL606	377018	0	C	G	frequency=1	new_cov=0/1	quality=-5.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	389		REL606	379334	0	T	G	frequency=1	new_cov=19/14	quality=83.4	ref_cov=0/0	tot_cov=20/14
RA	390		REL606	380188	0	A	C	frequency=1	new_cov=22/32	quality=148.9	ref_cov=0/0	tot_cov=22/32
RA	391		REL606	383083	0	A	C	frequency=1	new_cov=26/20	quality=122.9	ref_cov=0/0	tot_cov=26/21
RA	392		REL606	393379	0	G	T	frequency=1	new_cov=21/12	quality=85.8	ref_cov=0/0	tot_cov=21/12
RA	393		REL606	398007	0	T	G	frequency=1	new_cov=16/32	quality=126.3	ref_cov=0/0	tot_cov=16/32
RA	394		REL606	399655	0	C	A	frequency=1	new_cov=28/11	quality=111.0	ref_cov=0/0	tot_cov=28/11
RA	395		REL606	403444	0	A	C	frequency=1	new_cov=25/22	quality=130.0	ref_cov=0/0	tot_cov=25/22
RA	396		REL606	405910	0	C	A	frequency=1	new_cov=30/5	quality=75.5	ref_cov=1/0	tot_cov=31/5
RA	397		REL606	411430	0	T	G	frequency=1	new_cov=17/17	quality=79.6	ref_cov=0/0	tot_cov=17/17
RA	398		REL606	418409	0	A	C	frequency=1	new_cov=42/1	quality=116.2	ref_cov=0/0	tot_cov=42/1
RA	399		REL606	424738	0	T	G	frequency=1	new_cov=35/25	quality=161.6	ref_cov=0/0	tot_cov=36/25
RA	400		REL606	426998	0	C	A	frequency=1	new_cov=31/18	quality=140.9	ref_cov=0/0	tot_cov=31/18
RA	401		REL606	430317	1	.	G	frequency=1	new_cov=0/1	quality=-5.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	402		REL606	430321	0	A	T	frequency=1	new_cov=0/1	quality=-6.4	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	404		REL606	430835	0	C	T	frequency=1	new_cov=14/17	quality=85.6	ref_cov=0/0	tot_cov=14/17
RA	405		REL606	436416	0	T	G	frequency=1	new_cov=26/19	quality=121.8	ref_cov=0/0	tot_cov=26/19
RA	406		REL606	451789	0	A	G	frequency=1	new_cov=37/29	quality=179.7	ref_cov=0/1	tot_cov=37/30
RA	407		REL606	461180	0	A	C	frequency=1	new_cov=33/28	quality=162.1	ref_cov=0/0	tot_cov=34/29
RA	408		REL606	463771	0	A	C	frequency=1	new_cov=35/24	quality=162.3	ref_cov=0/0	tot_cov=35/24
RA	409		REL606	471680	0	T	G	frequency=1	new_cov=14/44	quality=158.7	ref_cov=0/1	tot_cov=14/45
RA	410		REL606	473602	0	T	G	frequency=1	new_cov=24/27	quality=133.8	ref_cov=0/0	tot_cov=24/27
RA	411		REL606	475292	1	.	G	frequency=1	new_cov=13/22	quality=54.4	ref_cov=3/3	tot_cov=16/25
RA	412		REL606	475904	0	C	A	frequency=1	new_cov=21/13	quality=87.4	ref_cov=0/0	tot_cov=21/14
RA	414		REL606	492156	0	C	A	frequency=1	new_cov=28/22	quality=134.9	ref_cov=0/0	tot_cov=28/22
RA	415		REL606	493795	0	T	G	frequency=1	new_cov=23/20	quality=115.6	ref_cov=0/0	tot_cov=23/20
RA	416		REL606	494682	0	T	G	frequency=1	new_cov=25/13	quality=100.9	ref_cov=0/0	tot_cov=25/13
RA	417		REL606	498169	0	G	A	frequency=1	new_cov=1/0	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	418		REL606	498178	0	G	A	frequency=1	new_cov=1/0	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	419		REL606	498179	0	G	C	frequency=1	new_cov=1/0	quality=-5.8	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	420		REL606	498187	0	G	C	frequency=1	new_cov=0/2	quality=-0.6	ref_cov=0/0	reject=EVALUE	tot_cov=0/2
RA	421		REL606	498193	0	G	C	frequency=1	new_cov=0/2	quality=-0.6	ref_cov=0/0	reject=EVALUE	tot_cov=0/2
RA	424		REL606	501689	0	G	T	frequency=1	new_cov=24/11	quality=96.9	ref_cov=0/0	tot_cov=24/11
RA	425		REL606	506450	0	T	G	frequency=1	new_cov=21/24	quality=115.3	ref_cov=1/0	tot_cov=23/24
RA	426		REL606	508599	0	A	C	frequency=1	new_cov=28/12	quality=95.9	ref_cov=1/0	tot_cov=29/12
RA	427		REL606	516413	0	T	G	frequency=1	new_cov=21/28	quality=133.2	ref_cov=0/0	tot_cov=22/28
RA	428		REL606	527702	0	A	C	frequency=1	new_cov=22/19	quality=109.5	ref_cov=0/0	tot_cov=22/19
RA	429		REL606	535238	0	T	G	frequency=1	new_cov=29/26	quality=150.1	ref_cov=0/0	tot_cov=29/26
RA	430		REL606	540028	0	A	C	frequency=1	new_cov=17/27	quality=114.5	ref_cov=0/1	tot_cov=18/28
RA	431		REL606	543686	0	T	G	frequency=1	new_cov=26/17	quality=117.1	ref_cov=0/0	tot_cov=26/17
RA	434		REL606	547702	0	C	A	deleted=1	frequency=1	new_cov=1/0	quality=-6.1	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	435		REL606	548926	0	C	T	deleted=1	frequency=1	new_cov=1/0	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	436		REL606	548941	0	A	T	deleted=1	frequency=1	new_cov=1/0	quality=-5.1	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	437		REL606	548945	0	C	T	deleted=1	frequency=1	new_cov=1/0	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	438		REL606	548948	0	C	T	deleted=1	frequency=1	new_cov=1/0	quality=-5.3	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	439		REL606	551237	0	A	G	deleted=1	frequency=1	new_cov=0/1	quality=-6.2	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	440		REL606	555054	0	G	A	deleted=1	frequency=1	new_cov=1/0	quality=-4.6	ref_cov=0/1	reject=EVALUE	tot_cov=1/1
RA	441		REL606	555066	0	C	T	deleted=1	frequency=1	new_cov=1/0	quality=-6.4	ref_cov=1/0	reject=EVALUE	tot_cov=2/1
RA	442		REL606	555260	0	C	A	deleted=1	frequency=1	new_cov=0/1	quality=-5.4	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	443		REL606	555408	0	A	G	deleted=1	frequency=1	new_cov=0/1	quality=-5.8	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	444		REL606	555414	0	T	G	deleted=1	frequency=1	new_cov=0/1	quality=-5.8	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	445		REL606	555432	0	G	A	deleted=1	frequency=1	new_cov=0/1	quality=-4.5	ref_cov=0/1	reject=EVALUE	tot_cov=0/2
RA	446		REL606	555575	0	C	T	deleted=1	frequency=1	new_cov=0/1	quality=-5.2	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	447		REL606	555576	0	T	C	deleted=1	frequency=1	new_cov=0/1	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	458		REL606	565482	0	T	G	frequency=1	new_cov=19/34	quality=137.7	ref_cov=0/1	tot_cov=19/35
RA	474		REL606	569915	0	C	T	frequency=1	new_cov=1/0	quality=-6.0	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	480		REL606	573112	1	.	T	frequency=1	new_cov=0/1	quality=-5.9	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	483		REL606	575344	0	A	C	frequency=1	new_cov=23/35	quality=151.4	ref_cov=0/0	tot_cov=23/35
RA	484		REL606	576388	0	A	C	frequency=1	new_cov=19/22	quality=110.7	ref_cov=0/0	tot_cov=19/22
RA	486		REL606	582155	0	A	C	frequency=1	new_cov=33/23	quality=153.8	ref_cov=0/0	tot_cov=33/23
RA	491		REL606	597017	0	A	C	frequency=1	new_cov=21/20	quality=97.0	ref_cov=1/0	tot_cov=22/20
RA	493		REL606	627805	0	T	G	frequency=1	new_cov=36/18	quality=138.3	ref_cov=0/1	tot_cov=37/19
RA	495		REL606	635217	0	A	C	frequency=1	new_cov=18/22	quality=96.2	ref_cov=0/1	tot_cov=18/23
RA	496		REL606	640290	0	T	G	frequency=1	new_cov=28/1	quality=69.8	ref_cov=1/0	tot_cov=29/2
RA	497		REL606	643694	0	T	G	frequency=1	new_cov=20/36	quality=150.5	ref_cov=0/1	tot_cov=20/37
RA	498		REL606	648307	0	A	C	frequency=1	new_cov=34/21	quality=150.5	ref_cov=0/0	tot_cov=34/21
RA	499		REL606	649391	0	T	A	frequency=1	new_cov=20/27	quality=134.0	ref_cov=0/0	tot_cov=20/27
RA	500		REL606	659814	0	T	G	frequency=1	new_cov=23/24	quality=127.0	ref_cov=0/0	tot_cov=23/24
RA	502		REL606	668787	0	A	C	frequency=1	new_cov=23/23	quality=119.4	ref_cov=0/1	tot_cov=23/24
RA	509		REL606	678896	0	A	T	frequency=1	new_cov=0/1	quality=-4.0	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	513		REL606	681317	0	T	G	frequency=1	new_cov=13/27	quality=100.2	ref_cov=1/0	tot_cov=14/27
RA	514		REL606	683496	0	A	C	frequency=1	new_cov=20/24	quality=117.7	ref_cov=0/0	tot_cov=20/24
RA	515		REL606	690209	0	T	G	frequency=1	new_cov=21/19	quality=109.6	ref_cov=0/0	tot_cov=21/19
RA	516		REL606	708381	0	T	G	frequency=1	new_cov=19/26	quality=118.1	ref_cov=0/1	tot_cov=19/27
RA	525		REL606	714041	0	A	C	frequency=1	new_cov=22/32	quality=135.0	ref_cov=1/0	tot_cov=24/32
RA	534		REL606	714992	0	A	C	frequency=1	new_cov=24/15	quality=101.9	ref_cov=0/0	tot_cov=24/15
RA	547		REL606	721536	0	T	G	frequency=1	new_cov=18/28	quality=122.0	ref_cov=0/0	tot_cov=18/28
RA	548		REL606	724534	0	A	C	frequency=1	new_cov=22/34	quality=149.6	ref_cov=0/0	tot_cov=22/34
RA	549		REL606	725676	0	A	C	frequency=1	new_cov=20/15	quality=85.2	ref_cov=0/1	tot_cov=20/16
RA	550		REL606	728010	0	T	G	frequency=1	new_cov=31/22	quality=147.1	ref_cov=0/0	tot_cov=31/22
RA	551		REL606	731342	0	T	G	frequency=1	new_cov=24/25	quality=130.2	ref_cov=0/0	tot_cov=24/25
RA	552		REL606	731494	0	T	G	frequency=1	new_cov=37/14	quality=140.2	ref_cov=0/0	tot_cov=37/14
RA	553		REL606	735533	0	T	G	frequency=1	new_cov=28/32	quality=165.5	ref_cov=0/0	tot_cov=28/32
RA	554		REL606	743093	0	G	A	frequency=1	new_cov=30/27	quality=150.4	ref_cov=0/0	tot_cov=31/27
RA	555		REL606	749853	0	A	C	frequency=1	new_cov=22/18	quality=100.9	ref_cov=0/0	tot_cov=22/18
RA	567		REL606	766329	0	T	G	frequency=1	new_cov=20/25	quality=121.4	ref_cov=0/0	tot_cov=20/25
RA	569		REL606	786559	0	T	G	frequency=1	new_cov=20/17	quality=99.7	ref_cov=0/0	tot_cov=20/17
RA	570		REL606	791065	0	A	C	frequency=1	new_cov=22/25	quality=125.3	ref_cov=0/0	tot_cov=22/25
RA	571		REL606	791672	0	T	G	frequency=1	new_cov=41/32	quality=203.4	ref_cov=0/0	tot_cov=41/32
RA	572		REL606	808158	0	T	G	frequency=1	new_cov=34/23	quality=155.8	ref_cov=0/0	tot_cov=34/23
RA	573		REL606	816306	0	T	G	frequency=1	new_cov=22/29	quality=131.6	ref_cov=0/1	tot_cov=22/30
RA	574		REL606	828820	0	T	G	frequency=1	new_cov=20/24	quality=121.5	ref_cov=0/0	tot_cov=20/24
RA	575		REL606	842160	0	A	C	frequency=1	new_cov=15/28	quality=117.6	ref_cov=0/0	tot_cov=15/28
RA	576		REL606	847206	0	T	G	frequency=1	new_cov=21/24	quality=118.8	ref_cov=0/1	tot_cov=21/25
RA	577		REL606	852041	0	A	C	frequency=1	new_cov=27/33	quality=148.5	ref_cov=0/1	tot_cov=27/35
RA	578		REL606	855272	0	A	C	frequency=1	new_cov=7/29	quality=99.7	ref_cov=0/0	tot_cov=7/29
RA	579		REL606	869618	0	T	G	frequency=1	new_cov=13/29	quality=112.3	ref_cov=0/0	tot_cov=13/29
RA	580		REL606	876767	0	A	C	frequency=1	new_cov=24/23	quality=125.4	ref_cov=0/0	tot_cov=24/24
RA	581		REL606	889497	0	T	G	frequency=1	new_cov=24/24	quality=131.4	ref_cov=1/0	tot_cov=25/24
RA	582		REL606	894179	0	T	G	frequency=1	new_cov=22/22	quality=117.7	ref_cov=0/0	tot_cov=24/23
RA	583		REL606	902709	0	T	G	frequency=1	new_cov=30/26	quality=152.0	ref_cov=0/0	tot_cov=30/26
RA	584		REL606	909616	0	T	G	frequency=1	new_cov=32/33	quality=179.8	ref_cov=0/0	tot_cov=32/33
RA	585		REL606	910316	0	T	C	frequency=1	new_cov=12/20	quality=85.9	ref_cov=0/0	tot_cov=12/20
RA	586		REL606	918143	0	A	C	frequency=1	new_cov=21/8	quality=74.5	ref_cov=0/0	tot_cov=21/8
RA	587		REL606	921642	0	T	G	frequency=1	new_cov=22/30	quality=127.5	ref_cov=0/1	tot_cov=22/32
RA	588		REL606	931180	0	A	C	frequency=1	new_cov=25/28	quality=120.2	ref_cov=0/2	tot_cov=26/30
RA	591		REL606	940678	0	C	T	frequency=1	new_cov=28/25	quality=150.2	ref_cov=0/0	tot_cov=28/27
RA	595		REL606	969305	0	T	G	frequency=1	new_cov=33/28	quality=163.9	ref_cov=1/0	tot_cov=36/28
RA	596		REL606	970635	0	T	G	frequency=1	new_cov=27/23	quality=116.7	ref_cov=1/1	tot_cov=28/24
RA	597		REL606	971637	0	T	G	frequency=1	new_cov=14/29	quality=109.6	ref_cov=0/1	tot_cov=14/30
RA	598		REL606	999454	0	A	C	frequency=1	new_cov=31/20	quality=141.8	ref_cov=0/0	tot_cov=31/20
RA	599		REL606	1003478	0	A	C	frequency=1	new_cov=31/23	quality=132.9	ref_cov=0/1	tot_cov=31/24
RA	600		REL606	1004193	0	C	A	frequency=1	new_cov=23/24	quality=127.6	ref_cov=0/0	tot_cov=23/24
RA	601		REL606	1004251	0	T	C	frequency=1	new_cov=7/19	quality=59.3	ref_cov=1/1	tot_cov=8/20
RA	602		REL606	1016770	0	T	G	frequency=1	new_cov=20/22	quality=113.4	ref_cov=0/0	tot_cov=20/22
RA	603		REL606	1016891	0	T	G	frequency=1	new_cov=16/26	quality=109.4	ref_cov=0/0	tot_cov=16/26
RA	604		REL606	1036240	0	T	G	frequency=1	new_cov=25/39	quality=176.0	ref_cov=0/1	tot_cov=25/40
RA	605		REL606	1044908	0	A	C	frequency=1	new_cov=25/17	quality=112.3	ref_cov=1/0	tot_cov=26/17
RA	606		REL606	1061648	0	A	C	frequency=1	new_cov=16/35	quality=137.5	ref_cov=1/0	tot_cov=17/35
RA	607		REL606	1086834	0	A	C	frequency=1	new_cov=23/21	quality=114.4	ref_cov=0/0	tot_cov=23/21
RA	608		REL606	1098758	0	A	C	frequency=1	new_cov=22/24	quality=114.7	ref_cov=1/0	tot_cov=23/24
RA	609		REL606	1107001	0	G	T	frequency=1	new_cov=27/25	quality=143.4	ref_cov=0/0	tot_cov=27/26
RA	610		REL606	1108953	0	T	G	frequency=1	new_cov=16/16	quality=83.6	ref_cov=0/0	tot_cov=16/16
RA	611		REL606	1110587	0	T	G	frequency=1	new_cov=0/1	quality=-6.1	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	612		REL606	1110590	1	.	C	frequency=1	new_cov=0/1	quality=-5.9	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	613		REL606	1110594	0	C	G	frequency=1	new_cov=0/1	quality=-6.0	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	614		REL606	1110599	0	G	C	frequency=1	new_cov=0/1	quality=-5.6	ref_cov=0/1	reject=EVALUE	tot_cov=0/2
RA	616		REL606	1110833	0	G	.	frequency=1	new_cov=1/0	quality=-1.3	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	617		REL606	1110869	0	C	G	frequency=1	new_cov=0/1	quality=-5.4	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	618		REL606	1110871	1	.	G	frequency=1	new_cov=0/1	quality=-6.1	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	619		REL606	1110935	1	.	C	frequency=1	new_cov=0/1	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	620		REL606	1110939	0	G	C	frequency=1	new_cov=0/1	quality=-4.9	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	632		REL606	1118093	0	A	C	frequency=1	new_cov=12/20	quality=86.3	ref_cov=0/0	tot_cov=12/20
RA	633		REL606	1121972	0	A	C	frequency=1	new_cov=27/27	quality=150.6	ref_cov=0/0	tot_cov=27/27
RA	634		REL606	1129502	0	A	C	frequency=1	new_cov=25/26	quality=135.6	ref_cov=0/0	tot_cov=25/26
RA	635		REL606	1136897	0	T	G	frequency=1	new_cov=24/26	quality=137.1	ref_cov=0/0	tot_cov=24/26
RA	636		REL606	1147072	0	T	G	frequency=1	new_cov=21/23	quality=110.4	ref_cov=0/1	tot_cov=22/24
RA	637		REL606	1166321	0	T	G	frequency=1	new_cov=20/10	quality=80.3	ref_cov=0/0	tot_cov=20/10
RA	638		REL606	1171882	0	T	G	frequency=1	new_cov=22/23	quality=120.6	ref_cov=0/0	tot_cov=22/23
RA	639		REL606	1175474	0	T	G	frequency=1	new_cov=18/16	quality=91.0	ref_cov=0/0	tot_cov=18/16
RA	640		REL606	1184149	0	A	C	frequency=1	new_cov=26/32	quality=161.4	ref_cov=0/0	tot_cov=26/33
RA	642		REL606	1216957	0	A	C	frequency=1	new_cov=20/13	quality=91.6	ref_cov=0/0	tot_cov=20/13
RA	643		REL606	1218309	0	A	C	frequency=1	new_cov=11/20	quality=81.1	ref_cov=0/0	tot_cov=12/20
RA	644		REL606	1221358	0	T	G	frequency=1	new_cov=26/34	quality=168.0	ref_cov=0/0	tot_cov=26/34
RA	645		REL606	1228779	0	T	G	frequency=1	new_cov=20/21	quality=98.3	ref_cov=0/0	tot_cov=20/21
RA	646		REL606	1230389	0	C	A	frequency=1	new_cov=20/35	quality=151.1	ref_cov=0/0	tot_cov=20/35
RA	647		REL606	1243473	0	A	C	frequency=1	new_cov=32/18	quality=131.2	ref_cov=1/0	tot_cov=33/19
RA	648		REL606	1244728	0	A	C	frequency=1	new_cov=32/27	quality=150.2	ref_cov=0/0	tot_cov=33/27
RA	649		REL606	1248380	0	A	C	frequency=1	new_cov=26/24	quality=129.8	ref_cov=0/0	tot_cov=26/24
RA	650		REL606	1252845	0	T	G	frequency=1	new_cov=25/19	quality=116.4	ref_cov=0/0	tot_cov=25/19
RA	666		REL606	1277282	0	T	G	frequency=1	new_cov=37/12	quality=131.1	ref_cov=0/0	tot_cov=37/13
RA	667		REL606	1278683	0	A	C	frequency=1	new_cov=21/16	quality=102.0	ref_cov=0/0	tot_cov=21/16
RA	668		REL606	1286699	0	C	A	frequency=1	new_cov=15/24	quality=109.7	ref_cov=0/0	tot_cov=15/24
RA	671		REL606	1305994	0	A	C	frequency=1	new_cov=25/22	quality=115.9	ref_cov=0/0	tot_cov=25/23
RA	673		REL606	1329516	0	C	T	frequency=1	new_cov=8/29	quality=99.4	ref_cov=0/0	tot_cov=8/29
RA	674		REL606	1329567	0	T	G	frequency=1	new_cov=18/16	quality=89.0	ref_cov=0/0	tot_cov=18/17
RA	675		REL606	1340917	0	A	C	frequency=1	new_cov=30/17	quality=124.6	ref_cov=0/0	tot_cov=31/18
RA	676		REL606	1342163	0	A	C	frequency=1	new_cov=28/29	quality=157.0	ref_cov=1/0	tot_cov=29/29
RA	677		REL606	1344571	0	T	G	frequency=1	new_cov=25/19	quality=115.1	ref_cov=1/0	tot_cov=27/19
RA	678		REL606	1344677	0	A	C	frequency=1	new_cov=12/31	quality=118.1	ref_cov=0/0	tot_cov=12/31
RA	679		REL606	1347413	0	A	C	frequency=1	new_cov=13/22	quality=85.4	ref_cov=0/2	tot_cov=13/24
RA	680		REL606	1355298	0	A	C	frequency=1	new_cov=13/29	quality=114.9	ref_cov=1/0	tot_cov=14/29
RA	681		REL606	1359652	0	T	G	frequency=1	new_cov=12/25	quality=99.9	ref_cov=0/0	tot_cov=13/25
RA	682		REL606	1364853	0	T	G	frequency=1	new_cov=15/14	quality=72.7	ref_cov=0/0	tot_cov=16/14
RA	683		REL606	1388180	0	T	G	frequency=1	new_cov=22/24	quality=124.8	ref_cov=0/0	tot_cov=22/24
RA	684		REL606	1394215	0	A	C	frequency=1	new_cov=19/13	quality=83.3	ref_cov=0/0	tot_cov=19/13
RA	685		REL606	1397197	0	A	C	frequency=1	new_cov=30/19	quality=130.5	ref_cov=0/1	tot_cov=30/20
RA	686		REL606	1402836	0	A	C	frequency=1	new_cov=17/12	quality=77.4	ref_cov=0/1	tot_cov=17/13
RA	687		REL606	1412217	0	A	C	frequency=1	new_cov=28/37	quality=180.6	ref_cov=0/0	tot_cov=28/37
RA	689		REL606	1417576	0	T	G	frequency=1	new_cov=25/14	quality=98.6	ref_cov=0/0	tot_cov=25/14
RA	692		REL606	1419306	0	T	G	frequency=1	new_cov=28/31	quality=153.5	ref_cov=0/0	tot_cov=28/31
RA	710		REL606	1447783	0	A	C	frequency=1	new_cov=35/25	quality=169.7	ref_cov=0/0	tot_cov=35/25
RA	711		REL606	1456048	0	A	C	frequency=1	new_cov=24/20	quality=116.0	ref_cov=0/0	tot_cov=26/20
RA	712		REL606	1456319	0	A	C	frequency=1	new_cov=14/26	quality=109.5	ref_cov=0/0	tot_cov=14/26
RA	714		REL606	1463096	0	A	C	frequency=1	new_cov=32/44	quality=206.6	ref_cov=0/1	tot_cov=32/45
RA	715		REL606	1464880	0	C	A	frequency=1	new_cov=16/15	quality=83.7	ref_cov=0/0	tot_cov=16/15
RA	716		REL606	1470975	0	T	G	frequency=1	new_cov=22/40	quality=151.5	ref_cov=1/2	tot_cov=23/42
RA	717		REL606	1477302	0	A	C	frequency=1	new_cov=29/22	quality=140.7	ref_cov=0/0	tot_cov=29/22
RA	718		REL606	1496171	0	A	C	frequency=1	new_cov=16/24	quality=103.5	ref_cov=0/0	tot_cov=16/25
RA	719		REL606	1498387	0	G	T	frequency=1	new_cov=0/1	quality=-6.0	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	726		REL606	1499186	1	.	C	frequency=1	new_cov=0/1	quality=-4.1	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	728		REL606	1503184	0	A	C	deleted=1	frequency=1	new_cov=0/1	quality=-5.7	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	729		REL606	1503188	0	A	C	deleted=1	frequency=1	new_cov=0/1	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	730		REL606	1503199	0	A	C	deleted=1	frequency=1	new_cov=0/1	quality=-5.7	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	736		REL606	1518024	0	A	C	frequency=1	new_cov=23/21	quality=115.1	ref_cov=0/0	tot_cov=23/22
RA	737		REL606	1520150	0	T	G	frequency=1	new_cov=18/15	quality=69.8	ref_cov=0/0	tot_cov=18/17
RA	738		REL606	1520715	0	A	C	frequency=1	new_cov=31/36	quality=179.8	ref_cov=0/0	tot_cov=31/36
RA	740		REL606	1522293	0	A	C	frequency=1	new_cov=36/27	quality=164.4	ref_cov=0/0	tot_cov=36/27
RA	741		REL606	1525072	0	T	G	frequency=1	new_cov=20/22	quality=110.4	ref_cov=0/0	tot_cov=20/22
RA	742		REL606	1532839	0	A	C	frequency=1	new_cov=25/28	quality=146.0	ref_cov=0/0	tot_cov=25/28
RA	743		REL606	1541538	0	T	G	frequency=1	new_cov=24/22	quality=122.3	ref_cov=0/0	tot_cov=24/22
RA	744		REL606	1544672	0	T	G	frequency=1	new_cov=21/23	quality=120.5	ref_cov=0/0	tot_cov=21/23
RA	751		REL606	1547418	0	T	G	frequency=1	new_cov=17/29	quality=113.9	ref_cov=0/0	tot_cov=17/29
RA	752		REL606	1555678	0	A	C	frequency=1	new_cov=35/23	quality=158.0	ref_cov=0/0	tot_cov=35/23
RA	753		REL606	1570553	0	A	C	frequency=1	new_cov=18/49	quality=184.2	ref_cov=0/0	tot_cov=18/50
RA	754		REL606	1574967	0	T	G	frequency=1	new_cov=20/38	quality=156.4	ref_cov=0/0	tot_cov=20/38
RA	755		REL606	1575413	0	A	C	frequency=1	new_cov=22/20	quality=114.9	ref_cov=0/0	tot_cov=22/21
RA	756		REL606	1588943	0	T	G	frequency=1	new_cov=18/15	quality=90.1	ref_cov=0/0	tot_cov=18/15
RA	757		REL606	1599820	0	A	C	frequency=1	new_cov=29/22	quality=137.3	ref_cov=0/1	tot_cov=29/23
RA	780		REL606	1607169	0	A	T	frequency=1	new_cov=0/1	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	781		REL606	1607172	1	.	G	frequency=1	new_cov=0/1	quality=-5.2	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	782		REL606	1607183	0	A	C	frequency=1	new_cov=0/1	quality=-4.7	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	783		REL606	1607683	1	.	C	frequency=1	new_cov=0/1	quality=-4.1	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	786		REL606	1611621	0	T	G	frequency=1	new_cov=25/23	quality=126.1	ref_cov=0/1	tot_cov=25/24
RA	791		REL606	1633778	0	A	C	frequency=1	new_cov=24/21	quality=118.6	ref_cov=1/0	tot_cov=25/22
RA	792		REL606	1634870	0	T	G	frequency=1	new_cov=36/18	quality=146.0	ref_cov=0/0	tot_cov=36/18
RA	793		REL606	1642043	0	A	C	frequency=1	new_cov=20/18	quality=101.2	ref_cov=0/0	tot_cov=20/18
RA	794		REL606	1647889	0	A	C	frequency=1	new_cov=15/32	quality=126.4	ref_cov=0/0	tot_cov=15/32
RA	795		REL606	1649169	0	T	G	frequency=1	new_cov=41/23	quality=177.2	ref_cov=0/0	tot_cov=42/23
RA	796		REL606	1659543	0	T	G	frequency=1	new_cov=32/28	quality=162.5	ref_cov=0/0	tot_cov=32/28
RA	797		REL606	1661682	0	T	G	frequency=1	new_cov=21/19	quality=108.4	ref_cov=0/0	tot_cov=21/19
RA	798		REL606	1682608	0	A	C	frequency=1	new_cov=14/16	quality=82.2	ref_cov=1/0	tot_cov=15/16
RA	800		REL606	1690600	0	T	G	frequency=1	new_cov=36/11	quality=125.5	ref_cov=0/0	tot_cov=36/11
RA	801		REL606	1692302	0	A	C	frequency=1	new_cov=33/27	quality=167.3	ref_cov=0/0	tot_cov=33/27
RA	802		REL606	1706773	0	C	A	frequency=1	new_cov=22/17	quality=97.8	ref_cov=1/0	tot_cov=23/18
RA	803		REL606	1707834	0	T	G	frequency=1	new_cov=20/20	quality=101.4	ref_cov=1/1	tot_cov=21/21
RA	804		REL606	1708787	0	A	C	frequency=1	new_cov=24/15	quality=104.5	ref_cov=0/0	tot_cov=25/15
RA	805		REL606	1712230	0	T	G	frequency=1	new_cov=18/24	quality=115.7	ref_cov=0/0	tot_cov=19/24
RA	806		REL606	1714815	0	A	C	frequency=1	new_cov=15/24	quality=106.9	ref_cov=0/0	tot_cov=15/24
RA	807		REL606	1732027	0	A	C	frequency=1	new_cov=16/15	quality=84.8	ref_cov=0/0	tot_cov=16/15
RA	808		REL606	1732450	0	A	C	frequency=1	new_cov=15/22	quality=98.9	ref_cov=0/0	tot_cov=15/22
RA	809		REL606	1738400	0	A	C	frequency=1	new_cov=28/33	quality=170.9	ref_cov=1/0	tot_cov=30/33
RA	810		REL606	1756840	0	A	C	frequency=1	new_cov=28/23	quality=140.0	ref_cov=0/1	tot_cov=28/24
RA	811		REL606	1759732	0	T	G	frequency=1	new_cov=20/34	quality=145.2	ref_cov=0/0	tot_cov=20/34
RA	812		REL606	1761548	0	A	C	frequency=1	new_cov=9/15	quality=63.4	ref_cov=0/0	tot_cov=9/15
RA	813		REL606	1764955	0	C	.	frequency=1	new_cov=16/28	quality=228.8	ref_cov=0/0	tot_cov=16/28
RA	814		REL606	1767478	0	T	G	frequency=1	new_cov=21/26	quality=126.6	ref_cov=0/0	tot_cov=21/26
RA	815		REL606	1785895	0	T	G	frequency=1	new_cov=26/27	quality=147.5	ref_cov=0/0	tot_cov=26/27
RA	816		REL606	1786512	0	T	G	frequency=1	new_cov=31/22	quality=138.7	ref_cov=0/0	tot_cov=31/22
RA	817		REL606	1790190	0	T	G	frequency=1	new_cov=16/20	quality=99.8	ref_cov=0/0	tot_cov=16/20
RA	818		REL606	1794984	0	T	G	frequency=1	new_cov=27/18	quality=117.0	ref_cov=0/0	tot_cov=28/20
RA	819		REL606	1795074	0	T	G	frequency=1	new_cov=34/38	quality=198.2	ref_cov=0/0	tot_cov=34/38
RA	820		REL606	1803438	0	A	C	frequency=1	new_cov=19/26	quality=120.1	ref_cov=0/0	tot_cov=19/26
RA	821		REL606	1806589	0	C	A	frequency=1	new_cov=36/19	quality=152.8	ref_cov=0/0	tot_cov=36/19
RA	822		REL606	1826639	0	T	G	frequency=1	new_cov=22/24	quality=125.0	ref_cov=0/0	tot_cov=22/24
RA	823		REL606	1829798	0	A	C	frequency=1	new_cov=15/37	quality=135.6	ref_cov=0/1	tot_cov=15/38
RA	824		REL606	1834004	0	A	C	frequency=1	new_cov=16/24	quality=105.6	ref_cov=0/0	tot_cov=16/25
RA	825		REL606	1840904	0	A	C	frequency=1	new_cov=33/33	quality=180.9	ref_cov=0/0	tot_cov=33/34
RA	827		REL606	1880102	0	A	C	frequency=1	new_cov=28/29	quality=149.9	ref_cov=0/0	tot_cov=28/29
RA	828		REL606	1886192	0	A	C	frequency=1	new_cov=35/38	quality=206.3	ref_cov=0/0	tot_cov=35/38
RA	829		REL606	1886806	0	T	G	frequency=1	new_cov=28/22	quality=135.4	ref_cov=1/0	tot_cov=29/22
RA	830		REL606	1902366	0	T	G	frequency=1	new_cov=37/20	quality=157.6	ref_cov=0/0	tot_cov=37/20
RA	831		REL606	1902841	0	A	C	frequency=1	new_cov=38/26	quality=163.1	ref_cov=1/0	tot_cov=40/27
RA	832		REL606	1904444	0	T	G	frequency=1	new_cov=27/32	quality=152.3	ref_cov=0/1	tot_cov=27/33
RA	833		REL606	1905858	0	A	C	frequency=1	new_cov=18/25	quality=115.7	ref_cov=0/0	tot_cov=18/26
RA	834		REL606	1909010	0	A	C	frequency=1	new_cov=16/26	quality=118.6	ref_cov=0/0	tot_cov=16/26
RA	835		REL606	1913540	0	A	C	frequency=1	new_cov=35/26	quality=164.3	ref_cov=0/1	tot_cov=35/27
RA	836		REL606	1921783	0	T	G	frequency=1	new_cov=33/32	quality=171.6	ref_cov=0/0	tot_cov=33/32
RA	837		REL606	1936330	0	A	C	frequency=1	new_cov=25/24	quality=132.9	ref_cov=0/0	tot_cov=25/24
RA	838		REL606	1936718	0	T	G	frequency=1	new_cov=17/25	quality=111.6	ref_cov=0/1	tot_cov=17/26
RA	839		REL606	1952123	0	T	G	frequency=1	new_cov=29/25	quality=139.8	ref_cov=0/0	tot_cov=29/25
RA	840		REL606	1966410	0	C	A	frequency=1	new_cov=22/14	quality=99.2	ref_cov=0/0	tot_cov=22/16
RA	842		REL606	1972086	0	T	G	frequency=1	new_cov=21/22	quality=116.5	ref_cov=0/0	tot_cov=21/23
RA	843		REL606	1972702	0	A	C	frequency=1	new_cov=41/25	quality=173.9	ref_cov=0/1	tot_cov=41/27
RA	846		REL606	1975162	0	T	G	frequency=1	new_cov=24/20	quality=116.5	ref_cov=0/0	tot_cov=24/21
RA	847		REL606	1976879	0	T	G	frequency=1	new_cov=23/12	quality=93.7	ref_cov=0/0	tot_cov=23/12
RA	848		REL606	1977296	0	T	G	frequency=1	new_cov=19/17	quality=98.4	ref_cov=0/0	tot_cov=19/17
RA	850		REL606	1987874	0	T	G	frequency=1	new_cov=35/29	quality=182.2	ref_cov=0/0	tot_cov=35/29
RA	851		REL606	1993134	0	A	C	frequency=1	new_cov=35/23	quality=155.3	ref_cov=0/0	tot_cov=36/23
RA	854		REL606	1998375	0	T	G	frequency=1	new_cov=29/25	quality=149.7	ref_cov=0/0	tot_cov=29/25
RA	855		REL606	1998939	0	T	G	frequency=1	new_cov=16/29	quality=117.5	ref_cov=0/0	tot_cov=16/30
RA	857		REL606	2002639	0	A	C	frequency=1	new_cov=40/22	quality=163.5	ref_cov=1/0	tot_cov=41/22
RA	858		REL606	2018771	0	A	C	frequency=1	new_cov=12/26	quality=95.0	ref_cov=0/0	tot_cov=13/28
RA	859		REL606	2028307	0	T	G	frequency=1	new_cov=39/23	quality=167.5	ref_cov=0/0	tot_cov=39/23
RA	860		REL606	2032093	0	G	A	deleted=1	frequency=1	new_cov=1/0	quality=-4.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	861		REL606	2032456	0	C	T	deleted=1	frequency=1	new_cov=1/0	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	862		REL606	2032542	0	C	G	deleted=1	frequency=1	new_cov=0/1	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	863		REL606	2035094	0	C	.	deleted=1	frequency=1	new_cov=1/0	quality=-1.3	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	864		REL606	2035095	0	A	G	deleted=1	frequency=1	new_cov=1/0	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	865		REL606	2049411	0	A	G	deleted=1	frequency=1	new_cov=1/0	quality=-3.7	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	866		REL606	2049414	0	T	G	deleted=1	frequency=1	new_cov=1/0	quality=-3.7	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	867		REL606	2049420	0	A	C	deleted=1	frequency=1	new_cov=1/0	quality=-3.7	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	868		REL606	2049421	1	.	C	deleted=1	frequency=1	new_cov=1/0	quality=-3.7	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	869		REL606	2054880	0	C	A	deleted=1	frequency=1	new_cov=1/0	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	870		REL606	2054927	0	A	T	deleted=1	frequency=1	new_cov=0/1	quality=-5.6	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	871		REL606	2054937	0	A	T	deleted=1	frequency=1	new_cov=0/1	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	872		REL606	2054942	0	T	G	deleted=1	frequency=1	new_cov=0/1	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	880		REL606	2061256	0	T	G	frequency=1	new_cov=33/20	quality=143.8	ref_cov=0/0	tot_cov=35/20
RA	881		REL606	2075227	0	A	C	frequency=1	new_cov=24/27	quality=138.8	ref_cov=0/0	tot_cov=24/27
RA	882		REL606	2081023	0	A	C	frequency=1	new_cov=47/31	quality=211.8	ref_cov=0/0	tot_cov=47/31
RA	883		REL606	2082685	0	G	A	frequency=1	new_cov=17/14	quality=81.5	ref_cov=0/0	tot_cov=17/14
RA	884		REL606	2083757	0	G	T	frequency=1	new_cov=28/44	quality=197.0	ref_cov=0/0	tot_cov=28/44
RA	888		REL606	2086607	0	T	G	frequency=1	new_cov=29/22	quality=140.2	ref_cov=0/0	tot_cov=30/22
RA	892		REL606	2101148	0	T	C	deleted=1	frequency=1	new_cov=0/1	quality=-5.7	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	893		REL606	2105266	0	C	A	deleted=1	frequency=1	new_cov=0/1	quality=-3.4	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	894		REL606	2106604	0	T	C	deleted=1	frequency=1	new_cov=1/0	quality=-6.2	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	895		REL606	2109061	0	G	A	deleted=1	frequency=1	new_cov=1/0	quality=-3.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	896		REL606	2109083	0	C	T	deleted=1	frequency=1	new_cov=1/0	quality=-6.0	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	897		REL606	2115629	0	T	G	deleted=1	frequency=1	new_cov=0/1	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	898		REL606	2117095	0	T	C	deleted=1	frequency=1	new_cov=0/1	quality=-5.0	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	900		REL606	2122430	0	A	C	deleted=1	frequency=1	new_cov=1/4	quality=7.9	ref_cov=0/0	tot_cov=1/4
RA	902		REL606	2127664	0	A	C	frequency=1	new_cov=20/12	quality=85.8	ref_cov=0/0	tot_cov=20/12
RA	903		REL606	2129371	0	T	G	deleted=1	frequency=1	new_cov=1/0	quality=-6.3	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	907		REL606	2145923	0	A	C	frequency=1	new_cov=21/27	quality=129.1	ref_cov=1/0	tot_cov=22/27
RA	908		REL606	2159082	0	A	C	frequency=1	new_cov=22/22	quality=112.3	ref_cov=0/0	tot_cov=22/22
RA	909		REL606	2165584	0	G	T	frequency=1	new_cov=11/3	quality=28.4	ref_cov=0/0	tot_cov=11/5
RA	913		REL606	2181209	0	T	G	frequency=1	new_cov=34/14	quality=130.9	ref_cov=0/0	tot_cov=34/14
RA	914		REL606	2183839	0	A	C	frequency=1	new_cov=22/33	quality=147.3	ref_cov=0/0	tot_cov=22/34
RA	915		REL606	2201029	0	T	G	frequency=1	new_cov=16/28	quality=121.5	ref_cov=0/0	tot_cov=16/28
RA	916		REL606	2201070	0	T	G	frequency=1	new_cov=21/18	quality=106.7	ref_cov=0/0	tot_cov=21/18
RA	917		REL606	2204048	0	T	G	frequency=1	new_cov=25/19	quality=120.5	ref_cov=0/0	tot_cov=25/19
RA	918		REL606	2222411	0	T	G	frequency=1	new_cov=20/21	quality=108.9	ref_cov=0/0	tot_cov=20/21
RA	919		REL606	2226691	0	T	G	frequency=1	new_cov=25/17	quality=112.9	ref_cov=0/0	tot_cov=25/17
RA	920		REL606	2226991	0	A	C	frequency=1	new_cov=13/23	quality=98.5	ref_cov=0/0	tot_cov=13/24
RA	921		REL606	2234717	0	T	G	frequency=1	new_cov=27/18	quality=125.4	ref_cov=0/0	tot_cov=27/18
RA	922		REL606	2237327	0	A	C	frequency=1	new_cov=23/28	quality=130.7	ref_cov=0/1	tot_cov=23/29
RA	923		REL606	2251433	0	T	G	frequency=1	new_cov=25/20	quality=115.3	ref_cov=0/1	tot_cov=25/21
RA	926		REL606	2254731	0	A	C	frequency=1	new_cov=1/0	quality=-5.7	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	928		REL606	2258360	0	A	C	frequency=1	new_cov=26/20	quality=123.7	ref_cov=0/1	tot_cov=26/21
RA	929		REL606	2260637	0	A	C	frequency=1	new_cov=20/20	quality=102.6	ref_cov=0/1	tot_cov=20/21
RA	932		REL606	2266908	0	A	C	frequency=1	new_cov=28/33	quality=173.7	ref_cov=1/0	tot_cov=29/33
RA	933		REL606	2285933	0	T	G	frequency=1	new_cov=24/33	quality=153.3	ref_cov=0/0	tot_cov=24/33
RA	934		REL606	2290343	0	T	G	frequency=1	new_cov=24/26	quality=136.0	ref_cov=0/0	tot_cov=25/26
RA	935		REL606	2303128	0	T	G	frequency=1	new_cov=28/22	quality=138.9	ref_cov=0/0	tot_cov=28/22
RA	936		REL606	2318103	0	A	C	frequency=1	new_cov=11/21	quality=79.0	ref_cov=0/0	tot_cov=11/23
RA	937		REL606	2320133	0	A	C	frequency=1	new_cov=7/24	quality=79.2	ref_cov=0/0	tot_cov=8/24
RA	938		REL606	2323662	0	A	C	frequency=1	new_cov=20/19	quality=85.5	ref_cov=0/0	tot_cov=22/19
RA	939		REL606	2333346	0	A	C	frequency=1	new_cov=32/45	quality=213.2	ref_cov=0/0	tot_cov=33/45
RA	940		REL606	2335296	0	T	G	frequency=1	new_cov=25/27	quality=140.2	ref_cov=0/1	tot_cov=26/28
RA	941		REL606	2341199	0	T	G	frequency=1	new_cov=30/31	quality=162.7	ref_cov=0/0	tot_cov=31/31
RA	942		REL606	2360181	0	A	C	frequency=1	new_cov=47/29	quality=203.4	ref_cov=1/0	tot_cov=48/30
RA	943		REL606	2361786	0	A	C	frequency=1	new_cov=24/27	quality=135.6	ref_cov=0/0	tot_cov=25/27
RA	944		REL606	2363106	0	T	G	frequency=1	new_cov=30/39	quality=186.6	ref_cov=0/0	tot_cov=30/39
RA	945		REL606	2368152	0	T	G	frequency=1	new_cov=18/23	quality=110.6	ref_cov=0/0	tot_cov=18/24
RA	946		REL606	2377269	0	T	G	frequency=1	new_cov=25/23	quality=132.0	ref_cov=0/0	tot_cov=25/23
RA	947		REL606	2387080	0	A	C	frequency=1	new_cov=32/23	quality=152.4	ref_cov=0/0	tot_cov=32/24
RA	949		REL606	2412193	0	G	T	frequency=1	new_cov=21/36	quality=155.7	ref_cov=0/0	tot_cov=21/36
RA	950		REL606	2422436	0	T	G	frequency=1	new_cov=18/23	quality=110.6	ref_cov=0/0	tot_cov=18/23
RA	951		REL606	2426725	0	A	C	frequency=1	new_cov=19/9	quality=71.5	ref_cov=0/0	tot_cov=20/9
RA	952		REL606	2439538	0	T	G	frequency=1	new_cov=24/26	quality=132.9	ref_cov=0/0	tot_cov=24/26
RA	953		REL606	2441230	0	A	C	frequency=1	new_cov=17/39	quality=148.4	ref_cov=0/0	tot_cov=17/40
RA	955		REL606	2446990	0	T	G	frequency=1	new_cov=24/25	quality=133.7	ref_cov=0/0	tot_cov=24/25
RA	964		REL606	2465005	0	A	C	frequency=1	new_cov=13/31	quality=116.2	ref_cov=0/0	tot_cov=13/31
RA	965		REL606	2474580	0	A	C	frequency=1	new_cov=28/17	quality=122.9	ref_cov=1/0	tot_cov=29/17
RA	966		REL606	2480430	0	A	C	frequency=1	new_cov=33/30	quality=172.4	ref_cov=1/0	tot_cov=34/30
RA	967		REL606	2484188	0	T	G	frequency=1	new_cov=25/18	quality=116.2	ref_cov=0/0	tot_cov=26/18
RA	968		REL606	2488924	0	T	G	frequency=1	new_cov=0/1	quality=-5.3	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	970		REL606	2489436	0	A	C	frequency=1	new_cov=23/29	quality=143.0	ref_cov=0/0	tot_cov=23/29
RA	971		REL606	2494611	0	A	C	frequency=1	new_cov=20/9	quality=39.8	ref_cov=0/10	tot_cov=20/20
RA	972		REL606	2497928	0	T	G	frequency=1	new_cov=22/23	quality=126.4	ref_cov=0/0	tot_cov=22/23
RA	973		REL606	2499945	0	A	C	frequency=1	new_cov=13/28	quality=111.6	ref_cov=0/0	tot_cov=13/28
RA	976		REL606	2503021	0	G	T	frequency=1	new_cov=23/34	quality=148.8	ref_cov=0/3	tot_cov=23/37
RA	977		REL606	2510826	0	T	G	frequency=1	new_cov=33/28	quality=159.6	ref_cov=1/0	tot_cov=34/28
RA	978		REL606	2511681	0	T	G	frequency=1	new_cov=22/31	quality=138.1	ref_cov=0/0	tot_cov=23/31
RA	979		REL606	2520902	0	T	G	frequency=1	new_cov=15/34	quality=133.8	ref_cov=0/0	tot_cov=16/34
RA	980		REL606	2527624	0	A	C	frequency=1	new_cov=31/20	quality=138.0	ref_cov=0/0	tot_cov=31/20
RA	981		REL606	2537679	0	G	T	frequency=1	new_cov=12/27	quality=101.4	ref_cov=0/0	tot_cov=12/28
RA	982		REL606	2540745	0	A	C	frequency=1	new_cov=18/17	quality=95.7	ref_cov=0/0	tot_cov=18/17
RA	985		REL606	2587662	0	A	C	frequency=1	new_cov=16/30	quality=125.9	ref_cov=0/0	tot_cov=16/30
RA	987		REL606	2594015	0	A	C	frequency=1	new_cov=43/44	quality=241.6	ref_cov=0/0	tot_cov=44/44
RA	988		REL606	2594074	0	A	C	frequency=1	new_cov=19/25	quality=121.0	ref_cov=0/0	tot_cov=19/25
RA	990		REL606	2619549	0	A	C	frequency=1	new_cov=22/24	quality=122.8	ref_cov=0/0	tot_cov=22/25
RA	991		REL606	2625494	0	T	G	frequency=1	new_cov=45/28	quality=197.3	ref_cov=0/0	tot_cov=45/28
RA	992		REL606	2629329	0	G	T	frequency=1	new_cov=26/15	quality=114.0	ref_cov=0/0	tot_cov=26/15
RA	993		REL606	2639091	0	T	G	frequency=1	new_cov=31/25	quality=149.6	ref_cov=0/0	tot_cov=31/27
RA	994		REL606	2641700	0	T	G	frequency=1	new_cov=24/22	quality=118.4	ref_cov=0/0	tot_cov=24/22
RA	997		REL606	2657995	0	T	C	frequency=1	new_cov=22/32	quality=151.8	ref_cov=0/0	tot_cov=22/32
RA	998		REL606	2671458	0	A	C	frequency=1	new_cov=28/17	quality=119.7	ref_cov=1/0	tot_cov=29/17
RA	999		REL606	2677546	0	A	C	frequency=1	new_cov=37/24	quality=162.5	ref_cov=0/0	tot_cov=38/24
RA	1002		REL606	2705690	0	A	C	frequency=1	new_cov=24/25	quality=133.1	ref_cov=1/0	tot_cov=25/25
RA	1010		REL606	2732014	0	C	A	frequency=1	new_cov=21/25	quality=116.4	ref_cov=1/0	tot_cov=23/26
RA	1011		REL606	2740772	0	A	C	frequency=1	new_cov=34/27	quality=165.6	ref_cov=0/0	tot_cov=34/28
RA	1012		REL606	2745079	0	T	G	frequency=1	new_cov=5/36	quality=102.3	ref_cov=0/1	tot_cov=5/38
RA	1013		REL606	2754688	0	T	G	frequency=1	new_cov=27/40	quality=177.9	ref_cov=0/1	tot_cov=27/41
RA	1014		REL606	2759524	0	A	C	frequency=1	new_cov=26/24	quality=133.4	ref_cov=0/0	tot_cov=27/24
RA	1016		REL606	2775627	1	.	A	frequency=1	new_cov=0/1	quality=-4.6	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	1018		REL606	2784272	0	A	C	frequency=1	new_cov=28/25	quality=141.4	ref_cov=0/0	tot_cov=28/25
RA	1019		REL606	2790674	0	T	G	frequency=1	new_cov=32/17	quality=131.2	ref_cov=0/0	tot_cov=32/17
RA	1022		REL606	2795341	0	T	G	frequency=1	new_cov=14/18	quality=82.3	ref_cov=1/0	tot_cov=15/18
RA	1023		REL606	2799764	0	T	G	frequency=1	new_cov=33/20	quality=143.1	ref_cov=0/0	tot_cov=33/20
RA	1024		REL606	2804425	0	T	G	frequency=1	new_cov=23/32	quality=156.4	ref_cov=0/0	tot_cov=23/32
RA	1025		REL606	2804511	0	A	C	frequency=1	new_cov=27/20	quality=130.6	ref_cov=0/0	tot_cov=27/20
RA	1026		REL606	2809503	0	T	G	frequency=1	new_cov=22/18	quality=108.3	ref_cov=0/0	tot_cov=22/18
RA	1027		REL606	2812394	0	T	G	frequency=1	new_cov=19/20	quality=105.9	ref_cov=0/0	tot_cov=19/20
RA	1028		REL606	2817492	0	T	G	frequency=1	new_cov=30/12	quality=111.3	ref_cov=0/0	tot_cov=31/12
RA	1030		REL606	2825941	0	A	C	frequency=1	new_cov=22/28	quality=140.9	ref_cov=0/0	tot_cov=22/28
RA	1031		REL606	2832497	0	A	C	frequency=1	new_cov=20/18	quality=103.4	ref_cov=0/0	tot_cov=20/19
RA	1032		REL606	2837626	0	T	G	frequency=1	new_cov=32/25	quality=153.0	ref_cov=0/0	tot_cov=32/25
RA	1033		REL606	2840075	0	A	C	frequency=1	new_cov=27/13	quality=108.6	ref_cov=0/0	tot_cov=27/13
RA	1038		REL606	2843663	0	A	C	frequency=1	new_cov=21/17	quality=101.6	ref_cov=0/0	tot_cov=21/17
RA	1039		REL606	2851294	0	A	C	frequency=1	new_cov=27/19	quality=129.3	ref_cov=0/0	tot_cov=27/19
RA	1040		REL606	2853864	0	A	C	frequency=1	new_cov=27/32	quality=163.9	ref_cov=0/0	tot_cov=27/32
RA	1041		REL606	2858322	0	T	G	frequency=1	new_cov=18/23	quality=106.7	ref_cov=1/0	tot_cov=19/23
RA	1042		REL606	2864911	0	C	A	frequency=1	new_cov=15/13	quality=70.9	ref_cov=0/0	tot_cov=15/13
RA	1043		REL606	2868116	0	T	G	frequency=1	new_cov=26/30	quality=151.4	ref_cov=0/0	tot_cov=26/30
RA	1044		REL606	2870517	0	T	G	frequency=1	new_cov=20/40	quality=167.1	ref_cov=0/0	tot_cov=20/40
RA	1045		REL606	2872152	0	T	G	frequency=1	new_cov=12/22	quality=80.7	ref_cov=0/0	tot_cov=13/24
RA	1047		REL606	2897800	0	T	G	frequency=1	new_cov=14/17	quality=75.2	ref_cov=0/0	tot_cov=14/17
RA	1048		REL606	2909993	0	T	G	frequency=1	new_cov=25/24	quality=138.5	ref_cov=0/0	tot_cov=25/24
RA	1049		REL606	2914384	0	G	T	frequency=1	new_cov=29/14	quality=114.0	ref_cov=0/0	tot_cov=29/14
RA	1050		REL606	2920951	0	T	G	frequency=1	new_cov=29/34	quality=167.8	ref_cov=0/0	tot_cov=30/34
RA	1051		REL606	2924475	0	A	C	frequency=1	new_cov=19/31	quality=136.2	ref_cov=0/0	tot_cov=19/31
RA	1052		REL606	2926721	0	A	C	frequency=1	new_cov=32/37	quality=186.5	ref_cov=0/0	tot_cov=32/37
RA	1053		REL606	2937857	0	A	C	frequency=1	new_cov=32/37	quality=186.9	ref_cov=0/0	tot_cov=32/37
RA	1054		REL606	2947175	0	A	C	frequency=1	new_cov=26/28	quality=143.4	ref_cov=0/0	tot_cov=26/28
RA	1055		REL606	2948477	0	A	C	frequency=1	new_cov=14/16	quality=77.1	ref_cov=0/0	tot_cov=14/16
RA	1056		REL606	2955191	0	A	C	frequency=1	new_cov=28/23	quality=134.2	ref_cov=0/1	tot_cov=28/25
RA	1058		REL606	2988792	0	T	G	frequency=1	new_cov=23/21	quality=116.5	ref_cov=1/0	tot_cov=25/21
RA	1060		REL606	3006683	0	A	C	frequency=1	new_cov=34/22	quality=149.9	ref_cov=0/0	tot_cov=34/23
RA	1064		REL606	3023893	0	T	G	frequency=1	new_cov=23/16	quality=108.8	ref_cov=0/0	tot_cov=23/16
RA	1066		REL606	3027011	0	T	G	frequency=1	new_cov=15/19	quality=89.6	ref_cov=0/0	tot_cov=15/19
RA	1067		REL606	3027683	0	A	C	frequency=1	new_cov=37/30	quality=185.0	ref_cov=0/0	tot_cov=37/31
RA	1068		REL606	3040080	0	A	C	frequency=1	new_cov=14/13	quality=74.4	ref_cov=0/0	tot_cov=14/13
RA	1069		REL606	3041354	0	C	A	frequency=1	new_cov=22/19	quality=107.2	ref_cov=1/0	tot_cov=23/19
RA	1070		REL606	3043941	0	T	G	frequency=1	new_cov=26/22	quality=128.7	ref_cov=0/0	tot_cov=26/22
RA	1071		REL606	3045069	0	G	T	frequency=1	new_cov=30/16	quality=129.9	ref_cov=0/0	tot_cov=30/16
RA	1072		REL606	3057690	0	A	C	frequency=1	new_cov=21/24	quality=116.0	ref_cov=0/0	tot_cov=21/25
RA	1076		REL606	3084190	0	T	G	frequency=1	new_cov=20/21	quality=110.9	ref_cov=0/2	tot_cov=20/23
RA	1077		REL606	3089831	0	A	C	frequency=1	new_cov=12/17	quality=65.6	ref_cov=1/2	tot_cov=13/19
RA	1078		REL606	3093117	0	T	G	frequency=1	new_cov=39/14	quality=150.3	ref_cov=0/0	tot_cov=39/14
RA	1079		REL606	3103672	0	G	A	frequency=1	new_cov=31/38	quality=189.1	ref_cov=0/0	tot_cov=32/38
RA	1080		REL606	3109306	0	T	G	frequency=1	new_cov=16/2	quality=44.7	ref_cov=0/0	tot_cov=16/2
RA	1081		REL606	3114886	0	T	G	frequency=1	new_cov=29/33	quality=175.9	ref_cov=0/0	tot_cov=29/33
RA	1082		REL606	3116928	0	A	C	frequency=1	new_cov=34/42	quality=214.2	ref_cov=0/0	tot_cov=34/42
RA	1083		REL606	3121407	0	A	C	frequency=1	new_cov=27/27	quality=149.7	ref_cov=0/0	tot_cov=27/27
RA	1084		REL606	3123757	0	A	C	frequency=1	new_cov=19/24	quality=105.1	ref_cov=0/0	tot_cov=20/24
RA	1085		REL606	3133535	0	T	G	frequency=1	new_cov=33/23	quality=143.0	ref_cov=0/0	tot_cov=34/23
RA	1086		REL606	3138764	0	A	C	frequency=1	new_cov=19/23	quality=100.9	ref_cov=1/0	tot_cov=21/23
RA	1087		REL606	3155168	0	G	A	frequency=1	new_cov=13/19	quality=85.8	ref_cov=0/0	tot_cov=13/19
RA	1088		REL606	3162213	0	A	C	frequency=1	new_cov=24/20	quality=113.4	ref_cov=0/1	tot_cov=24/21
RA	1089		REL606	3173835	0	T	G	frequency=1	new_cov=16/26	quality=116.2	ref_cov=0/0	tot_cov=16/26
RA	1090		REL606	3178868	0	A	C	frequency=1	new_cov=35/26	quality=172.5	ref_cov=0/0	tot_cov=35/26
RA	1091		REL606	3184072	0	T	G	frequency=1	new_cov=16/17	quality=88.1	ref_cov=0/0	tot_cov=16/17
RA	1092		REL606	3187264	0	A	C	frequency=1	new_cov=31/20	quality=139.7	ref_cov=0/0	tot_cov=31/20
RA	1093		REL606	3188042	0	T	G	frequency=1	new_cov=19/31	quality=133.3	ref_cov=0/1	tot_cov=19/32
RA	1094		REL606	3192570	0	T	G	frequency=1	new_cov=8/10	quality=14.6	ref_cov=0/0	tot_cov=9/20
RA	1095		REL606	3211263	0	T	G	frequency=1	new_cov=15/33	quality=118.7	ref_cov=0/0	tot_cov=15/34
RA	1096		REL606	3217222	0	A	C	frequency=1	new_cov=36/21	quality=160.5	ref_cov=0/0	tot_cov=37/21
RA	1097		REL606	3219202	0	A	C	frequency=1	new_cov=19/18	quality=101.5	ref_cov=0/0	tot_cov=19/19
RA	1098		REL606	3227037	0	T	G	frequency=1	new_cov=28/27	quality=144.9	ref_cov=0/0	tot_cov=28/27
RA	1099		REL606	3236743	0	A	C	frequency=1	new_cov=17/15	quality=85.9	ref_cov=0/0	tot_cov=17/15
RA	1100		REL606	3243698	0	A	C	frequency=1	new_cov=31/21	quality=145.4	ref_cov=0/0	tot_cov=31/21
RA	1101		REL606	3248957	0	A	T	frequency=1	new_cov=33/31	quality=177.2	ref_cov=1/0	tot_cov=34/32
RA	1102		REL606	3252768	0	T	G	frequency=1	new_cov=18/18	quality=92.2	ref_cov=0/0	tot_cov=18/18
RA	1103		REL606	3253256	0	A	C	frequency=1	new_cov=25/13	quality=100.8	ref_cov=0/1	tot_cov=25/14
RA	1105		REL606	3260604	0	T	G	frequency=1	new_cov=15/22	quality=103.0	ref_cov=0/0	tot_cov=15/22
RA	1106		REL606	3262857	0	A	C	frequency=1	new_cov=25/13	quality=103.2	ref_cov=0/0	tot_cov=25/13
RA	1107		REL606	3272110	0	A	C	frequency=1	new_cov=18/19	quality=100.9	ref_cov=0/0	tot_cov=18/19
RA	1108		REL606	3281577	0	A	C	frequency=1	new_cov=31/30	quality=167.5	ref_cov=0/0	tot_cov=31/30
RA	1109		REL606	3288092	0	G	A	frequency=1	new_cov=33/24	quality=164.7	ref_cov=0/0	tot_cov=33/24
RA	1111		REL606	3297875	0	A	C	frequency=1	new_cov=17/33	quality=142.3	ref_cov=0/0	tot_cov=17/33
RA	1112		REL606	3303212	0	T	G	frequency=1	new_cov=17/22	quality=103.0	ref_cov=1/0	tot_cov=18/22
RA	1113		REL606	3303353	0	A	C	frequency=1	new_cov=15/19	quality=92.0	ref_cov=0/0	tot_cov=15/20
RA	1116		REL606	3325845	0	T	G	frequency=1	new_cov=25/29	quality=138.2	ref_cov=1/1	tot_cov=26/30
RA	1117		REL606	3333231	0	T	G	frequency=1	new_cov=21/17	quality=106.1	ref_cov=0/0	tot_cov=21/17
RA	1118		REL606	3339158	0	A	C	frequency=1	new_cov=40/38	quality=223.0	ref_cov=0/0	tot_cov=40/38
RA	1119		REL606	3341864	0	C	A	frequency=1	new_cov=24/20	quality=118.7	ref_cov=0/0	tot_cov=24/20
RA	1125		REL606	3355639	0	A	.	frequency=1	new_cov=0/1	quality=-2.7	ref_cov=0/0	reject=EVALUE	tot_cov=0/1
RA	1127		REL606	3360344	0	A	C	frequency=1	new_cov=20/25	quality=125.0	ref_cov=0/0	tot_cov=20/25
RA	1128		REL606	3369432	0	T	C	frequency=1	new_cov=27/18	quality=122.8	ref_cov=0/0	tot_cov=27/19
RA	1129		REL606	3370027	0	T	A	frequency=1	new_cov=19/37	quality=156.5	ref_cov=0/0	tot_cov=19/37
RA	1130		REL606	3373799	0	A	C	frequency=1	new_cov=26/29	quality=148.3	ref_cov=0/0	tot_cov=26/30
RA	1131		REL606	3384112	0	T	G	frequency=1	new_cov=25/37	quality=170.4	ref_cov=0/0	tot_cov=25/37
RA	1138		REL606	3404580	0	T	G	frequency=1	new_cov=14/9	quality=53.7	ref_cov=0/0	tot_cov=14/10
RA	1139		REL606	3414905	0	T	G	frequency=1	new_cov=22/18	quality=107.3	ref_cov=0/0	tot_cov=22/18
RA	1143		REL606	3436635	0	T	G	frequency=1	new_cov=39/35	quality=205.9	ref_cov=0/0	tot_cov=39/35
RA	1144		REL606	3459043	0	A	C	frequency=1	new_cov=38/19	quality=149.6	ref_cov=0/0	tot_cov=38/19
RA	1145		REL606	3462285	0	A	C	frequency=1	new_cov=20/26	quality=121.0	ref_cov=1/0	tot_cov=21/26
RA	1146		REL606	3466075	0	A	C	frequency=1	new_cov=24/32	quality=156.5	ref_cov=0/0	tot_cov=24/32
RA	1147		REL606	3470129	0	T	G	frequency=1	new_cov=21/26	quality=126.3	ref_cov=0/1	tot_cov=21/27
RA	1148		REL606	3475086	0	T	G	frequency=1	new_cov=40/27	quality=184.4	ref_cov=0/0	tot_cov=40/28
RA	1149		REL606	3483047	0	C	A	frequency=1	new_cov=16/28	quality=121.5	ref_cov=0/0	tot_cov=16/28
RA	1150		REL606	3485307	0	A	C	frequency=1	new_cov=17/25	quality=105.3	ref_cov=0/0	tot_cov=17/25
RA	1151		REL606	3490112	0	C	T	frequency=1	new_cov=34/28	quality=175.6	ref_cov=0/0	tot_cov=34/28
RA	1152		REL606	3493524	0	T	G	frequency=1	new_cov=22/21	quality=118.3	ref_cov=0/0	tot_cov=22/21
RA	1153		REL606	3495915	0	G	T	frequency=1	new_cov=20/27	quality=131.1	ref_cov=0/1	tot_cov=20/28
RA	1154		REL606	3498495	0	A	C	frequency=1	new_cov=16/11	quality=72.8	ref_cov=0/0	tot_cov=16/11
RA	1155		REL606	3499025	0	T	G	frequency=1	new_cov=30/25	quality=142.5	ref_cov=0/1	tot_cov=30/27
RA	1156		REL606	3500952	0	A	C	frequency=1	new_cov=25/22	quality=126.3	ref_cov=0/0	tot_cov=25/22
RA	1157		REL606	3506469	0	A	C	frequency=1	new_cov=30/36	quality=179.1	ref_cov=0/0	tot_cov=30/36
RA	1158		REL606	3506840	0	T	G	frequency=1	new_cov=22/14	quality=90.7	ref_cov=0/0	tot_cov=22/14
RA	1159		REL606	3507177	0	A	C	frequency=1	new_cov=25/21	quality=119.6	ref_cov=0/0	tot_cov=25/22
RA	1160		REL606	3519804	0	T	G	frequency=1	new_cov=21/33	quality=141.2	ref_cov=2/0	tot_cov=23/33
RA	1161		REL606	3521505	0	A	C	frequency=1	new_cov=20/19	quality=108.8	ref_cov=0/0	tot_cov=20/19
RA	1162		REL606	3527310	0	A	C	frequency=1	new_cov=26/10	quality=87.4	ref_cov=0/0	tot_cov=26/10
RA	1163		REL606	3528587	0	A	C	frequency=1	new_cov=20/19	quality=99.8	ref_cov=0/0	tot_cov=20/19
RA	1164		REL606	3537761	0	T	G	frequency=1	new_cov=4/25	quality=78.9	ref_cov=0/0	tot_cov=4/25
RA	1165		REL606	3541981	0	A	C	frequency=1	new_cov=29/32	quality=168.0	ref_cov=0/0	tot_cov=29/32
RA	1166		REL606	3542534	0	A	C	frequency=1	new_cov=20/20	quality=107.5	ref_cov=0/0	tot_cov=20/20
RA	1167		REL606	3543278	0	A	C	frequency=1	new_cov=24/25	quality=106.3	ref_cov=1/3	tot_cov=27/28
RA	1168		REL606	3543935	0	A	C	frequency=1	new_cov=23/29	quality=140.0	ref_cov=0/0	tot_cov=23/29
RA	1182		REL606	3555146	0	G	T	frequency=1	new_cov=9/2	quality=23.6	ref_cov=0/0	tot_cov=9/2
RA	1194		REL606	3557298	0	C	A	frequency=1	new_cov=34/25	quality=160.8	ref_cov=0/0	tot_cov=34/25
RA	1195		REL606	3561248	0	A	C	frequency=1	new_cov=18/9	quality=70.6	ref_cov=0/0	tot_cov=18/9
RA	1196		REL606	3566725	0	T	G	frequency=1	new_cov=16/36	quality=135.7	ref_cov=0/1	tot_cov=16/37
RA	1197		REL606	3574505	0	C	A	frequency=1	new_cov=20/29	quality=140.7	ref_cov=0/0	tot_cov=20/29
RA	1198		REL606	3575750	0	T	G	frequency=1	new_cov=26/16	quality=105.5	ref_cov=0/0	tot_cov=26/17
RA	1199		REL606	3576996	0	A	C	frequency=1	new_cov=27/37	quality=170.0	ref_cov=0/1	tot_cov=27/38
RA	1202		REL606	3581373	0	A	C	frequency=1	new_cov=23/13	quality=93.8	ref_cov=0/0	tot_cov=24/13
RA	1206		REL606	3596144	0	T	G	frequency=1	new_cov=11/15	quality=64.5	ref_cov=0/1	tot_cov=11/17
RA	1209		REL606	3599293	0	A	C	frequency=1	new_cov=16/19	quality=86.4	ref_cov=0/0	tot_cov=16/19
RA	1210		REL606	3605645	0	T	G	frequency=1	new_cov=19/28	quality=125.0	ref_cov=0/1	tot_cov=19/29
RA	1211		REL606	3609865	0	T	G	frequency=1	new_cov=53/26	quality=217.8	ref_cov=0/0	tot_cov=53/27
RA	1212		REL606	3612954	0	T	G	frequency=1	new_cov=26/33	quality=154.1	ref_cov=0/1	tot_cov=26/34
RA	1213		REL606	3613023	0	A	C	frequency=1	new_cov=22/35	quality=159.2	ref_cov=0/0	tot_cov=22/35
RA	1214		REL606	3617683	0	T	G	frequency=1	new_cov=29/27	quality=146.5	ref_cov=0/1	tot_cov=30/28
RA	1215		REL606	3617837	0	A	C	frequency=1	new_cov=23/17	quality=106.2	ref_cov=0/0	tot_cov=24/17
RA	1235		REL606	3641648	0	A	C	frequency=1	new_cov=25/27	quality=139.5	ref_cov=0/0	tot_cov=25/27
RA	1236		REL606	3644741	0	T	G	frequency=1	new_cov=15/14	quality=77.3	ref_cov=0/0	tot_cov=15/14
RA	1237		REL606	3650528	0	A	C	frequency=1	new_cov=30/24	quality=151.6	ref_cov=0/0	tot_cov=30/24
RA	1239		REL606	3657614	0	A	C	frequency=1	new_cov=22/29	quality=138.8	ref_cov=0/0	tot_cov=22/30
RA	1240		REL606	3668060	0	T	G	frequency=1	new_cov=33/24	quality=160.3	ref_cov=0/0	tot_cov=33/24
RA	1241		REL606	3683249	0	T	G	frequency=1	new_cov=18/22	quality=104.6	ref_cov=0/0	tot_cov=18/23
RA	1242		REL606	3685258	0	A	C	frequency=1	new_cov=34/30	quality=178.9	ref_cov=0/0	tot_cov=35/30
RA	1243		REL606	3692673	0	T	G	frequency=1	new_cov=8/16	quality=63.8	ref_cov=0/0	tot_cov=8/16
RA	1247		REL606	3699461	0	A	C	frequency=1	new_cov=4/6	quality=21.5	ref_cov=0/0	tot_cov=4/6
RA	1266		REL606	3711747	0	A	C	frequency=1	new_cov=30/18	quality=126.8	ref_cov=1/0	tot_cov=31/18
RA	1267		REL606	3712483	0	A	C	frequency=1	new_cov=24/42	quality=184.1	ref_cov=0/0	tot_cov=24/42
RA	1268		REL606	3713828	0	G	T	frequency=1	new_cov=31/31	quality=175.2	ref_cov=0/1	tot_cov=31/32
RA	1269		REL606	3716330	0	A	C	frequency=1	new_cov=31/39	quality=183.1	ref_cov=0/0	tot_cov=31/39
RA	1270		REL606	3716676	0	C	A	frequency=1	new_cov=41/39	quality=208.0	ref_cov=0/0	tot_cov=41/40
RA	1271		REL606	3718474	0	T	G	frequency=1	new_cov=25/20	quality=119.9	ref_cov=0/0	tot_cov=25/20
RA	1272		REL606	3718728	0	G	T	frequency=1	new_cov=36/27	quality=175.3	ref_cov=0/0	tot_cov=36/27
RA	1273		REL606	3722953	0	G	T	frequency=1	new_cov=22/19	quality=109.6	ref_cov=0/0	tot_cov=22/19
RA	1274		REL606	3724516	0	T	G	frequency=1	new_cov=46/41	quality=239.2	ref_cov=1/1	tot_cov=47/42
RA	1275		REL606	3737701	0	T	G	frequency=1	new_cov=21/24	quality=123.5	ref_cov=0/0	tot_cov=21/24
RA	1279		REL606	3743455	0	T	G	frequency=1	new_cov=30/47	quality=217.1	ref_cov=1/0	tot_cov=31/47
RA	1280		REL606	3748382	0	T	G	frequency=1	new_cov=19/24	quality=114.4	ref_cov=0/1	tot_cov=19/25
RA	1281		REL606	3757158	0	A	C	frequency=1	new_cov=25/29	quality=149.7	ref_cov=0/2	tot_cov=25/31
RA	1282		REL606	3759405	0	T	G	frequency=1	new_cov=27/36	quality=173.8	ref_cov=0/0	tot_cov=27/36
RA	1283		REL606	3762741	0	A	T	frequency=1	new_cov=30/19	quality=138.9	ref_cov=0/0	tot_cov=30/19
RA	1284		REL606	3781098	0	T	G	frequency=1	new_cov=24/24	quality=125.8	ref_cov=0/1	tot_cov=24/25
RA	1285		REL606	3781398	0	A	C	frequency=1	new_cov=16/23	quality=103.1	ref_cov=0/0	tot_cov=16/23
RA	1286		REL606	3792298	0	A	C	frequency=1	new_cov=19/12	quality=82.3	ref_cov=0/0	tot_cov=19/12
RA	1289		REL606	3797813	0	T	G	frequency=1	new_cov=11/31	quality=110.1	ref_cov=0/0	tot_cov=11/31
RA	1290		REL606	3805135	0	A	C	frequency=1	new_cov=34/22	quality=150.5	ref_cov=1/0	tot_cov=35/22
RA	1291		REL606	3805357	0	A	C	frequency=1	new_cov=28/18	quality=120.4	ref_cov=0/0	tot_cov=28/18
RA	1292		REL606	3806072	0	A	C	frequency=1	new_cov=26/21	quality=123.4	ref_cov=0/0	tot_cov=27/21
RA	1293		REL606	3806477	0	A	C	frequency=1	new_cov=21/17	quality=75.3	ref_cov=0/4	tot_cov=22/22
RA	1294		REL606	3822363	0	A	C	frequency=1	new_cov=24/23	quality=128.2	ref_cov=0/0	tot_cov=24/23
RA	1295		REL606	3822763	0	T	G	frequency=1	new_cov=35/13	quality=121.7	ref_cov=0/0	tot_cov=36/13
RA	1296		REL606	3822784	0	A	C	frequency=1	new_cov=41/20	quality=158.7	ref_cov=0/0	tot_cov=41/21
RA	1297		REL606	3824042	0	A	C	frequency=1	new_cov=27/27	quality=144.5	ref_cov=0/0	tot_cov=27/27
RA	1298		REL606	3834332	0	T	G	frequency=1	new_cov=32/18	quality=136.9	ref_cov=0/0	tot_cov=32/18
RA	1299		REL606	3835234	0	A	C	frequency=1	new_cov=34/39	quality=202.2	ref_cov=0/0	tot_cov=34/39
RA	1300		REL606	3842724	0	T	G	frequency=1	new_cov=38/28	quality=179.5	ref_cov=0/0	tot_cov=38/28
RA	1301		REL606	3856914	0	A	C	frequency=1	new_cov=14/27	quality=113.0	ref_cov=0/0	tot_cov=14/27
RA	1302		REL606	3857359	0	T	G	frequency=1	new_cov=25/33	quality=161.8	ref_cov=0/0	tot_cov=25/33
RA	1303		REL606	3857817	0	T	G	frequency=1	new_cov=37/16	quality=146.7	ref_cov=0/0	tot_cov=37/16
RA	1304		REL606	3859873	0	T	G	frequency=1	new_cov=22/12	quality=92.8	ref_cov=0/1	tot_cov=22/13
RA	1305		REL606	3865067	0	A	C	frequency=1	new_cov=17/23	quality=104.0	ref_cov=0/0	tot_cov=17/23
RA	1306		REL606	3875632	1	.	T	frequency=1	new_cov=12/11	quality=51.3	ref_cov=0/2	tot_cov=12/13
RA	1307		REL606	3886222	0	A	C	frequency=1	new_cov=28/19	quality=124.7	ref_cov=1/0	tot_cov=29/19
RA	1308		REL606	3893551	1	.	G	frequency=1	new_cov=18/21	quality=107.2	ref_cov=0/0	tot_cov=18/21
RA	1309		REL606	3893551	2	.	G	frequency=1	new_cov=18/21	quality=104.3	ref_cov=0/0	tot_cov=18/21
RA	1311		REL606	3898036	0	G	T	deleted=1	frequency=1	new_cov=1/0	quality=-6.4	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	1312		REL606	3898037	0	C	T	deleted=1	frequency=1	new_cov=1/0	quality=-5.6	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	1313		REL606	3898042	0	A	C	deleted=1	frequency=1	new_cov=1/0	quality=-6.2	ref_cov=0/0	reject=EVALUE	tot_cov=1/0
RA	1318		REL606	3911660	0	A	C	frequency=1	new_cov=16/21	quality=95.6	ref_cov=0/0	tot_cov=17/21
RA	1319		REL606	3917503	0	T	G	frequency=1	new_cov=16/19	quality=96.7	ref_cov=0/0	tot_cov=16/19
RA	1320		REL606	3922213	0	A	C	frequency=1	new_cov=28/42	quality=192.4	ref_cov=0/0	tot_cov=28/42
RA	1321		REL606	3923571	0	A	C	frequency=1	new_cov=34/30	quality=174.7	ref_cov=0/0	tot_cov=34/30
RA	1322		REL606	3930609	0	T	G	frequency=1	new_cov=22/32	quality=132.8	ref_cov=1/0	tot_cov=23/33
RA	1323		REL606	3932175	0	T	G	frequency=1	new_cov=23/28	quality=133.0	ref_cov=0/1	tot_cov=23/29
RA	1324		REL606	3934468	0	A	C	frequency=1	new_cov=26/15	quality=113.9	ref_cov=0/0	tot_cov=26/15
RA	1325		REL606	3936513	0	A	C	frequency=1	new_cov=34/25	quality=166.3	ref_cov=0/0	tot_cov=34/25
RA	1326		REL606	3942051	0	A	C	frequency=1	new_cov=20/19	quality=104.2	ref_cov=0/0	tot_cov=20/19
RA	1328		REL606	3945610	0	T	G	frequency=1	new_cov=21/29	quality=137.6	ref_cov=0/0	tot_cov=21/29
RA	1329		REL606	3945896	0	A	C	frequency=1	new_cov=16/3	quality=41.9	ref_cov=0/0	tot_cov=16/3
RA	1331		REL606	3955552	0	T	G	frequency=1	new_cov=40/43	quality=228.0	ref_cov=0/0	tot_cov=42/43
RA	1332		REL606	3962760	0	T	G	frequency=1	new_cov=18/23	quality=112.3	ref_cov=0/0	tot_cov=18/23
RA	1333		REL606	3963863	0	T	G	frequency=1	new_cov=40/33	quality=205.3	ref_cov=0/0	tot_cov=40/33
RA	1336		REL606	3966983	0	T	G	frequency=1	new_cov=17/29	quality=128.1	ref_cov=0/0	tot_cov=17/29
RA	1337		REL606	3968103	0	T	G	frequency=1	new_cov=32/22	quality=140.9	ref_cov=0/0	tot_cov=33/22
RA	1338		REL606	3968307	0	T	G	frequency=1	new_cov=19/28	quality=126.2	ref_cov=0/0	tot_cov=19/28
RA	1339		REL606	3969200	0	T	G	frequency=1	new_cov=19/34	quality=136.0	ref_cov=1/0	tot_cov=20/34
RA	1340		REL606	3970954	0	A	C	frequency=1	new_cov=22/30	quality=143.4	ref_cov=0/0	tot_cov=22/30
RA	1341		REL606	3976831	0	T	G	frequency=1	new_cov=22/30	quality=139.4	ref_cov=0/0	tot_cov=22/31
RA	1342		REL606	3984539	0	G	T	frequency=1	new_cov=34/24	quality=156.4	ref_cov=0/2	tot_cov=34/26
RA	1343		REL606	3992033	0	A	C	frequency=1	new_cov=8/33	quality=100.4	ref_cov=0/0	tot_cov=10/33
RA	1344		REL606	3992619	0	T	G	frequency=1	new_cov=22/22	quality=107.7	ref_cov=1/2	tot_cov=23/24
RA	1345		REL606	3994424	0	T	G	frequency=1	new_cov=26/43	quality=183.2	ref_cov=0/1	tot_cov=26/44
RA	1346		REL606	3995913	0	A	C	frequency=1	new_cov=32/24	quality=145.0	ref_cov=0/0	tot_cov=32/25
RA	1347		REL606	3998776	0	A	C	frequency=1	new_cov=38/18	quality=145.5	ref_cov=0/1	tot_cov=38/19
RA	1348		REL606	3998959	0	A	C	frequency=1	new_cov=29/12	quality=110.7	ref_cov=0/0	tot_cov=30/12
RA	1349		REL606	4011464	0	A	C	frequency=1	new_cov=22/14	quality=88.1	ref_cov=0/0	tot_cov=23/15
RA	1351		REL606	4013609	0	A	C	frequency=1	new_cov=6/1	quality=14.5	ref_cov=0/0	tot_cov=6/1
RA	1359		REL606	4027844	0	T	G	frequency=1	new_cov=37/19	quality=152.9	ref_cov=0/0	tot_cov=37/19
RA	1360		REL606	4029063	0	A	C	frequency=1	new_cov=27/19	quality=121.5	ref_cov=0/0	tot_cov=27/20
RA	1361		REL606	4038134	0	T	G	frequency=1	new_cov=25/42	quality=192.6	ref_cov=0/0	tot_cov=25/42
RA	1362		REL606	4039222	0	A	C	frequency=1	new_cov=21/20	quality=111.0	ref_cov=0/0	tot_cov=21/20
RA	1363		REL606	4058501	0	T	G	frequency=1	new_cov=12/21	quality=85.9	ref_cov=0/0	tot_cov=13/21
RA	1365		REL606	4064362	0	T	G	frequency=1	new_cov=19/33	quality=143.8	ref_cov=0/0	tot_cov=20/33
RA	1366		REL606	4070289	0	A	C	frequency=1	new_cov=29/10	quality=104.7	ref_cov=0/0	tot_cov=29/10
RA	1367		REL606	4070711	0	T	G	frequency=1	new_cov=26/20	quality=118.5	ref_cov=0/1	tot_cov=26/21
RA	1368		REL606	4070746	0	T	G	frequency=1	new_cov=21/29	quality=133.8	ref_cov=0/0	tot_cov=21/29
RA	1369		REL606	4073894	0	T	G	frequency=1	new_cov=21/20	quality=100.8	ref_cov=1/0	tot_cov=22/20
RA	1370		REL606	4073906	0	A	C	frequency=1	new_cov=17/20	quality=94.6	ref_cov=1/0	tot_cov=18/20
RA	1371		REL606	4075029	0	T	G	frequency=1	new_cov=22/35	quality=150.2	ref_cov=0/0	tot_cov=22/35
RA	1372		REL606	4078976	0	A	C	frequency=1	new_cov=18/24	quality=108.9	ref_cov=0/0	tot_cov=18/26
RA	1373		REL606	4081115	0	A	C	frequency=1	new_cov=16/20	quality=96.1	ref_cov=1/0	tot_cov=17/20
RA	1374		REL606	4089472	0	A	C	frequency=1	new_cov=18/16	quality=78.1	ref_cov=1/0	tot_cov=21/16
RA	1375		REL606	4089879	0	A	C	frequency=1	new_cov=22/14	quality=92.8	ref_cov=0/0	tot_cov=22/14
RA	1376		REL606	4096930	0	A	C	frequency=1	new_cov=20/20	quality=110.1	ref_cov=0/0	tot_cov=20/20
RA	1377		REL606	4100655	0	C	T	frequency=1	new_cov=25/14	quality=100.8	ref_cov=0/0	tot_cov=25/15
RA	1378		REL606	4102718	0	A	C	frequency=1	new_cov=18/16	quality=84.6	ref_cov=0/0	tot_cov=18/16
RA	1379		REL606	4116720	0	T	G	frequency=1	new_cov=20/16	quality=97.1	ref_cov=0/0	tot_cov=20/16
RA	1380		REL606	4118298	0	T	G	frequency=1	new_cov=21/24	quality=123.9	ref_cov=0/0	tot_cov=21/24
RA	1381		REL606	4121449	0	T	G	frequency=1	new_cov=24/29	quality=143.0	ref_cov=0/0	tot_cov=24/29
RA	1382		REL606	4126706	0	T	.	frequency=1	new_cov=4/14	quality=87.4	ref_cov=0/0	tot_cov=4/14
RA	1383		REL606	4139889	0	T	G	frequency=1	new_cov=41/29	quality=186.8	ref_cov=0/0	tot_cov=41/30
RA	1384		REL606	4142501	0	T	G	frequency=1	new_cov=28/26	quality=150.7	ref_cov=0/0	tot_cov=28/26
RA	1398		REL606	4156805	0	T	G	frequency=1	new_cov=35/27	quality=150.8	ref_cov=2/0	tot_cov=37/27
RA	1399		REL606	4163173	0	T	G	frequency=1	new_cov=40/19	quality=154.5	ref_cov=1/1	tot_cov=42/20
RA	1400		REL606	4166668	0	A	C	frequency=1	new_cov=32/27	quality=151.7	ref_cov=0/0	tot_cov=33/29
RA	1401		REL606	4175612	0	A	C	frequency=1	new_cov=19/25	quality=120.6	ref_cov=1/0	tot_cov=21/25
RA	1402		REL606	4180045	0	A	C	frequency=1	new_cov=28/32	quality=165.8	ref_cov=0/0	tot_cov=28/32
RA	1403		REL606	4180211	0	C	.	frequency=1	new_cov=15/21	quality=178.6	ref_cov=0/0	tot_cov=16/21
RA	1404		REL606	4180803	0	A	C	frequency=1	new_cov=12/22	quality=86.7	ref_cov=0/0	tot_cov=13/23
RA	1412		REL606	4201911	0	C	T	frequency=1	new_cov=33/19	quality=138.4	ref_cov=3/0	tot_cov=36/19
RA	1413		REL606	4202859	0	A	C	frequency=1	new_cov=40/34	quality=204.2	ref_cov=0/1	tot_cov=40/35
RA	1414		REL606	4225047	0	A	C	frequency=1	new_cov=23/29	quality=140.7	ref_cov=0/0	tot_cov=23/30
RA	1415		REL606	4227464	0	T	G	frequency=1	new_cov=23/18	quality=107.6	ref_cov=0/0	tot_cov=23/18
RA	1416		REL606	4230064	0	T	G	frequency=1	new_cov=20/34	quality=153.1	ref_cov=0/0	tot_cov=20/34
RA	1417		REL606	4240745	0	T	G	frequency=1	new_cov=20/29	quality=117.5	ref_cov=1/0	tot_cov=21/30
RA	1418		REL606	4248845	0	T	G	frequency=1	new_cov=24/24	quality=130.9	ref_cov=0/0	tot_cov=24/24
RA	1419		REL606	4262744	0	A	C	frequency=1	new_cov=17/16	quality=72.6	ref_cov=1/0	tot_cov=18/16
RA	1420		REL606	4272929	0	T	G	frequency=1	new_cov=22/19	quality=108.7	ref_cov=0/1	tot_cov=22/20
RA	1423		REL606	4283162	0	A	C	frequency=1	new_cov=23/21	quality=120.5	ref_cov=0/0	tot_cov=23/21
RA	1424		REL606	4292123	0	A	C	frequency=1	new_cov=22/34	quality=152.3	ref_cov=0/0	tot_cov=22/34
RA	1425		REL606	4296969	0	T	G	frequency=1	new_cov=21/30	quality=123.7	ref_cov=0/1	tot_cov=22/32
RA	1430		REL606	4311978	0	A	C	frequency=1	new_cov=23/26	quality=128.3	ref_cov=0/0	tot_cov=23/26
RA	1431		REL606	4332868	0	A	C	frequency=1	new_cov=35/22	quality=152.9	ref_cov=0/0	tot_cov=35/22
RA	1433		REL606	4350624	0	A	C	frequency=1	new_cov=29/29	quality=155.5	ref_cov=0/0	tot_cov=29/29
RA	1434		REL606	4353840	0	A	C	frequency=1	new_cov=28/25	quality=140.5	ref_cov=1/0	tot_cov=29/25
RA	1438		REL606	4388311	0	A	C	frequency=1	new_cov=21/11	quality=87.6	ref_cov=0/0	tot_cov=22/11
RA	1439		REL606	4391658	0	T	G	frequency=1	new_cov=20/22	quality=115.0	ref_cov=0/0	tot_cov=20/22
RA	1440		REL606	4392506	0	C	A	frequency=1	new_cov=21/28	quality=134.2	ref_cov=1/0	tot_cov=22/28
RA	1441		REL606	4403583	0	A	C	frequency=1	new_cov=27/31	quality=153.6	ref_cov=0/1	tot_cov=27/33
RA	1442		REL606	4404811	0	T	G	frequency=1	new_cov=19/22	quality=106.8	ref_cov=0/0	tot_cov=19/22
RA	1443		REL606	4405984	0	A	C	frequency=1	new_cov=26/25	quality=130.6	ref_cov=0/0	tot_cov=26/25
RA	1444		REL606	4412016	0	T	G	frequency=1	new_cov=33/17	quality=136.3	ref_cov=0/0	tot_cov=33/17
RA	1445		REL606	4414202	0	A	C	frequency=1	new_cov=34/29	quality=167.2	ref_cov=0/1	tot_cov=34/30
RA	1446		REL606	4425276	0	T	G	frequency=1	new_cov=36/42	quality=216.7	ref_cov=0/0	tot_cov=36/43
RA	1447		REL606	4435204	0	T	G	frequency=1	new_cov=33/15	quality=115.7	ref_cov=0/0	tot_cov=33/19
RA	1448		REL606	4446077	0	T	G	frequency=1	new_cov=29/16	quality=124.3	ref_cov=0/0	tot_cov=29/16
RA	1449		REL606	4448669	0	G	T	frequency=1	new_cov=32/25	quality=145.8	ref_cov=0/4	tot_cov=33/29
RA	1450		REL606	4455062	0	T	G	frequency=1	new_cov=37/28	quality=165.7	ref_cov=0/1	tot_cov=37/29
RA	1451		REL606	4466019	0	A	C	frequency=1	new_cov=25/23	quality=132.3	ref_cov=0/0	tot_cov=25/23
RA	1452		REL606	4466781	0	T	G	frequency=1	new_cov=25/31	quality=137.5	ref_cov=0/0	tot_cov=25/32
RA	1453		REL606	4487389	0	T	G	frequency=1	new_cov=25/24	quality=129.9	ref_cov=0/0	tot_cov=25/25
RA	1455		REL606	4490493	0	T	G	frequency=1	new_cov=27/24	quality=137.1	ref_cov=0/0	tot_cov=27/24
RA	1456		REL606	4490502	0	T	G	frequency=1	new_cov=30/30	quality=154.6	ref_cov=0/0	tot_cov=30/31
RA	1458		REL606	4498025	0	T	G	frequency=1	new_cov=18/17	quality=89.1	ref_cov=0/0	tot_cov=19/17
RA	1460		REL606	4511435	0	A	C	frequency=1	new_cov=18/33	quality=135.1	ref_cov=0/0	tot_cov=18/33
RA	1462		REL606	4526771	0	A	C	frequency=1	new_cov=22/30	quality=146.1	ref_cov=0/0	tot_cov=22/31
RA	1463		REL606	4530188	0	A	C	frequency=1	new_cov=19/16	quality=83.5	ref_cov=0/0	tot_cov=19/16
RA	1464		REL606	4531921	0	A	C	frequency=1	new_cov=25/19	quality=114.1	ref_cov=0/0	tot_cov=25/19
RA	1465		REL606	4534381	0	T	G	frequency=1	new_cov=23/37	quality=166.4	ref_cov=0/0	tot_cov=25/37
RA	1466		REL606	4544266	0	T	G	frequency=1	new_cov=26/44	quality=184.4	ref_cov=1/0	tot_cov=28/44
RA	1467		REL606	4545297	0	T	G	frequency=1	new_cov=24/16	quality=105.8	ref_cov=0/0	tot_cov=24/16
RA	1468		REL606	4547935	0	T	G	frequency=1	new_cov=9/17	quality=70.8	ref_cov=0/0	tot_cov=9/17
RA	1470		REL606	4552312	0	T	G	frequency=1	new_cov=35/24	quality=165.5	ref_cov=0/0	tot_cov=35/24
RA	1471		REL606	4560791	0	A	C	frequency=1	new_cov=28/33	quality=168.9	ref_cov=0/0	tot_cov=28/33
RA	1472		REL606	4562591	0	T	G	frequency=1	new_cov=14/24	quality=101.0	ref_cov=0/0	tot_cov=14/24
RA	1473		REL606	4570266	0	A	C	frequency=1	new_cov=20/41	quality=160.1	ref_cov=0/1	tot_cov=20/43
RA	1474		REL606	4577252	0	T	G	frequency=1	new_cov=30/35	quality=177.0	ref_cov=0/0	tot_cov=30/36
RA	1475		REL606	4583243	0	T	G	frequency=1	new_cov=29/40	quality=180.7	ref_cov=0/0	tot_cov=29/40
RA	1478		REL606	4598130	0	A	C	frequency=1	new_cov=23/17	quality=110.2	ref_cov=0/0	tot_cov=23/17
RA	1479		REL606	4601064	0	A	C	frequency=1	new_cov=27/30	quality=158.4	ref_cov=0/0	tot_cov=27/30
RA	1482		REL606	4613809	0	A	C	frequency=1	new_cov=38/26	quality=168.1	ref_cov=1/0	tot_cov=39/26
RA	1483		REL606	4616396	0	G	A	frequency=1	new_cov=19/45	quality=184.4	ref_cov=0/0	tot_cov=19/45
RA	1484		REL606	4628873	0	T	G	frequency=1	new_cov=20/31	quality=144.8	ref_cov=0/0	tot_cov=20/31
MC	451		REL606	546956	555939	744	134	left_inside_cov=17	left_outside_cov=21	right_inside_cov=16	right_outside_cov=21
MC	732		REL606	1500303	1503758	2873	577	left_inside_cov=19	left_outside_cov=20	right_inside_cov=15	right_outside_cov=21
MC	874		REL606	2031671	2054974	31	31	left_inside_cov=19	left_outside_cov=21	right_inside_cov=19	right_outside_cov=20
MC	901		REL606	2100298	2122435	0	0	left_inside_cov=19	left_outside_cov=20	right_inside_cov=19	right_outside_cov=21
MC	904		REL606	2128621	2137410	748	0	left_inside_cov=17	left_outside_cov=21	right_inside_cov=0	right_outside_cov=48
MC	1021		REL606	2792647	2792712	19	16	left_inside_cov=19	left_outside_cov=20	right_inside_cov=19	right_outside_cov=20
MC	1110		REL606	3289962	3289977	0	0	left_inside_cov=0	left_outside_cov=75	right_inside_cov=0	right_outside_cov=73
MC	1314		REL606	3893577	3901930	1417	0	left_inside_cov=17	left_outside_cov=22	right_inside_cov=0	right_outside_cov=49
JC	23		REL606	1	1	REL606	4629812	-1	0	alignment_overlap=0	circular_chromosome=1	coverage_minus=25	coverage_plus=27	flanking_left=36	flanking_right=36	key=REL606__1__1__REL606__4629812__0__0____36__36__0__0	max_left=35	max_left_minus=35	max_left_plus=33	max_min_left=17	max_min_left_minus=17	max_min_left_plus=16	max_min_right=18	max_min_right_minus=17	max_min_right_plus=18	max_right=35	max_right_minus=34	max_right_plus=35	min_overlap_score=408	pos_hash_score=34	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=52	total_reads=52
JC	94		REL606	4927	1	REL606	224502	-1	-6	alignment_overlap=-6	coverage_minus=2	coverage_plus=3	flanking_left=36	flanking_right=36	key=REL606__4927__1__REL606__224502__0__-6__CAGCCG__36__36__0__0	max_left=30	max_left_minus=30	max_left_plus=14	max_min_left=12	max_min_left_minus=9	max_min_left_plus=12	max_min_right=14	max_min_right_minus=0	max_min_right_plus=14	max_right=17	max_right_minus=17	max_right_plus=16	min_overlap_score=41	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5	unique_read_sequence=CAGCCG
JC	261		REL606	5541	1	REL606	69368	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__5549__1__REL606__69368__1__8____36__36__1__0	max_left=21	max_left_minus=21	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=4	max_min_right_minus=4	max_min_right_plus=0	max_right=4	max_right_minus=4	max_right_plus=0	min_overlap_score=4	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=8	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	174		REL606	5585	1	REL606	2467360	1	0	alignment_overlap=14	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__5585__1__REL606__2467346__1__14____36__36__0__0	max_left=7	max_left_minus=0	max_left_plus=7	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=15	max_right_minus=0	max_right_plus=15	min_overlap_score=7	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=14	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	196		REL606	5585	1	REL606	3521623	-1	0	alignment_overlap=6	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__5585__1__REL606__3521629__0__6____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=14	max_min_right_plus=0	max_right=14	max_right_minus=14	max_right_plus=0	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	246		REL606	5640	-1	REL606	2776863	-1	0	alignment_overlap=9	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__5640__0__REL606__2776872__0__9____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=1	max_min_left_minus=1	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=26	max_right_minus=26	max_right_plus=0	min_overlap_score=2	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	149		REL606	5668	-1	REL606	523517	1	0	alignment_overlap=10	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__5668__0__REL606__523507__1__10____36__36__1__1	max_left=13	max_left_minus=13	max_left_plus=0	max_min_left=9	max_min_left_minus=9	max_min_left_plus=0	max_min_right=13	max_min_right_minus=13	max_min_right_plus=0	max_right=14	max_right_minus=14	max_right_plus=0	min_overlap_score=22	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=10	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=2
JC	5		REL606	15386	1	REL606	4524527	-1	0	alignment_overlap=3	coverage_minus=25	coverage_plus=27	flanking_left=36	flanking_right=36	key=REL606__15386__1__REL606__4524530__0__3____36__36__1__0	max_left=32	max_left_minus=30	max_left_plus=32	max_min_left=16	max_min_left_minus=15	max_min_left_plus=16	max_min_right=16	max_min_right_minus=16	max_min_right_plus=14	max_right=31	max_right_minus=31	max_right_plus=31	min_overlap_score=401	pos_hash_score=34	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=52	total_reads=111
JC	20		REL606	15386	1	REL606	2322340	1	0	alignment_overlap=5	coverage_minus=16	coverage_plus=31	flanking_left=36	flanking_right=36	key=REL606__15384__1__REL606__2322337__1__5____36__36__1__0	max_left=30	max_left_minus=30	max_left_plus=30	max_min_left=15	max_min_left_minus=15	max_min_left_plus=15	max_min_right=15	max_min_right_minus=15	max_min_right_plus=15	max_right=30	max_right_minus=30	max_right_plus=30	min_overlap_score=397	pos_hash_score=30	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=47	total_reads=57
JC	6		REL606	16728	-1	REL606	4524522	1	0	alignment_overlap=3	coverage_minus=22	coverage_plus=27	flanking_left=36	flanking_right=36	key=REL606__16728__0__REL606__4524519__1__3____36__36__1__0	max_left=32	max_left_minus=30	max_left_plus=32	max_min_left=16	max_min_left_minus=16	max_min_left_plus=16	max_min_right=16	max_min_right_minus=16	max_min_right_plus=15	max_right=31	max_right_minus=31	max_right_plus=30	min_overlap_score=458	pos_hash_score=30	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=49	total_reads=105
JC	9		REL606	16972	1	REL606	2775877	-1	0	alignment_overlap=9	coverage_minus=28	coverage_plus=16	flanking_left=36	flanking_right=36	key=REL606__16972__1__REL606__2775886__0__9____36__36__0__1	max_left=26	max_left_minus=26	max_left_plus=25	max_min_left=13	max_min_left_minus=13	max_min_left_plus=12	max_min_right=12	max_min_right_minus=11	max_min_right_plus=12	max_right=26	max_right_minus=26	max_right_plus=25	min_overlap_score=291	pos_hash_score=26	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=44	total_reads=88
JC	8		REL606	16974	-1	REL606	2774435	1	0	alignment_overlap=5	coverage_minus=32	coverage_plus=30	flanking_left=36	flanking_right=36	key=REL606__16976__0__REL606__2774432__1__5____36__36__0__1	max_left=30	max_left_minus=29	max_left_plus=30	max_min_left=15	max_min_left_minus=14	max_min_left_plus=15	max_min_right=15	max_min_right_minus=15	max_min_right_plus=11	max_right=30	max_right_minus=30	max_right_plus=30	min_overlap_score=479	pos_hash_score=38	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=2	side_2_redundant=1	total_non_overlap_reads=62	total_reads=91
JC	140		REL606	17567	-1	REL606	1981276	-1	-4	alignment_overlap=-4	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__17567__0__REL606__1981276__0__-4__AGTT__36__36__0__0	max_left=13	max_left_minus=13	max_left_plus=12	max_min_left=13	max_min_left_minus=13	max_min_left_plus=12	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=17	max_right_plus=16	min_overlap_score=25	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=AGTT
JC	28		REL606	23716	-1	REL606	3595199	-1	0	alignment_overlap=3	coverage_minus=158	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__23716__0__REL606__3595202__0__3____36__36__0__1	max_left=32	max_left_minus=32	max_left_plus=0	max_min_left=9	max_min_left_minus=9	max_min_left_plus=0	max_min_right=13	max_min_right_minus=13	max_min_right_plus=0	max_right=17	max_right_minus=17	max_right_plus=0	min_overlap_score=721	pos_hash_score=18	reject=NJ	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=158	total_reads=151
JC	29		REL606	23720	-1	REL606	954162	-1	0	alignment_overlap=1	coverage_minus=55	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__23720__0__REL606__954163__0__1____36__36__0__1	max_left=34	max_left_minus=34	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=14	max_min_right_plus=0	max_right=14	max_right_minus=14	max_right_plus=0	min_overlap_score=279	pos_hash_score=16	reject=NJ	side_1_annotate_key=repeat	side_1_overlap=1	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=55	total_reads=48
JC	1		REL606	23729	-1	REL606	666128	-1	0	alignment_overlap=3	coverage_minus=27	coverage_plus=18	flanking_left=36	flanking_right=36	key=REL606__23729__0__REL606__666131__0__3____36__36__1__1	max_left=32	max_left_minus=32	max_left_plus=32	max_min_left=16	max_min_left_minus=15	max_min_left_plus=16	max_min_right=12	max_min_right_minus=11	max_min_right_plus=12	max_right=32	max_right_minus=32	max_right_plus=30	min_overlap_score=313	pos_hash_score=32	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=45	total_reads=168
JC	233		REL606	38854	1	REL606	114356	-1	0	alignment_overlap=12	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__38854__1__REL606__114368__0__12____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=18	max_right_minus=0	max_right_plus=18	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=12	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	272		REL606	38882	-1	REL606	349679	1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__38882__0__REL606__349677__1__2____36__36__0__0	max_left=11	max_left_minus=11	max_left_plus=0	max_min_left=11	max_min_left_minus=11	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=23	max_right_minus=23	max_right_plus=0	min_overlap_score=11	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	176		REL606	38968	-1	REL606	2583282	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__38968__0__REL606__2583282__0__0____36__36__1__0	max_left=31	max_left_minus=0	max_left_plus=31	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=0	max_min_right_plus=3	max_right=3	max_right_minus=0	max_right_plus=3	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	298		REL606	38984	-1	REL606	1001464	-1	0	alignment_overlap=13	coverage_minus=1	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__38971__0__REL606__1001464__0__13____36__36__1__0	max_left=16	max_left_minus=1	max_left_plus=16	max_min_left=2	max_min_left_minus=1	max_min_left_plus=2	max_min_right=7	max_min_right_minus=0	max_min_right_plus=7	max_right=21	max_right_minus=21	max_right_plus=21	min_overlap_score=10	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=13	side_2_redundant=0	total_non_overlap_reads=3	total_reads=1
JC	76		REL606	44704	-1	REL606	1578704	-1	0	alignment_overlap=9	coverage_minus=8	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__44704__0__REL606__1578713__0__9____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=7	max_min_right_plus=0	max_right=7	max_right_minus=7	max_right_plus=0	min_overlap_score=25	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8
JC	154		REL606	45274	-1	REL606	470289	1	-1	alignment_overlap=-1	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__45274__0__REL606__470289__1__-1__G__36__36__0__0	max_left=0	max_left_minus=0	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=35	max_right_minus=0	max_right_plus=35	min_overlap_score=0	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=G
JC	47		REL606	45762	1	REL606	4411710	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=12	flanking_left=36	flanking_right=36	key=REL606__45762__1__REL606__4411719__0__9____36__36__0__0	max_left=7	max_left_minus=0	max_left_plus=7	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=34	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=12	total_reads=12
JC	223		REL606	45926	-1	REL606	280490	1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__45926__0__REL606__280490__1__0____36__36__0__0	max_left=21	max_left_minus=0	max_left_plus=21	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=13	max_right_minus=0	max_right_plus=13	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	159		REL606	62419	1	REL606	4467448	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__62419__1__REL606__4467449__0__1____36__36__0__0	max_left=13	max_left_minus=0	max_left_plus=13	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=22	max_right_minus=0	max_right_plus=22	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	177		REL606	62426	1	REL606	62436	1	-3	alignment_overlap=-3	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__62426__1__REL606__62436__1__-3__GCC__36__36__0__0	max_left=29	max_left_minus=29	max_left_plus=4	max_min_left=4	max_min_left_minus=0	max_min_left_plus=4	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=0	max_right_plus=28	min_overlap_score=3	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1	unique_read_sequence=GCC
JC	265		REL606	62432	-1	REL606	2255144	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__62423__0__REL606__2255144__0__9____36__36__1__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=9	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	172		REL606	63940	-1	REL606	3261573	-1	-7	alignment_overlap=-7	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__63940__0__REL606__3261573__0__-7__AAATATT__36__36__0__0	max_left=13	max_left_minus=13	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=13	max_min_right_plus=0	max_right=13	max_right_minus=13	max_right_plus=0	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=AAATATT
JC	102		REL606	68880	-1	REL606	3702277	1	-7	alignment_overlap=-7	coverage_minus=4	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__68880__0__REL606__3702277__1__-7__TACATGA__36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=14	max_min_right_plus=14	max_right=14	max_right_minus=14	max_right_plus=14	min_overlap_score=63	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5	unique_read_sequence=TACATGA
JC	184		REL606	69368	1	REL606	69619	-1	-3	alignment_overlap=-3	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__69368__1__REL606__69619__0__-3__TTC__36__36__0__0	max_left=8	max_left_minus=8	max_left_plus=0	max_min_left=8	max_min_left_minus=8	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=21	max_right_minus=21	max_right_plus=0	min_overlap_score=8	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=TTC
JC	247		REL606	69476	1	REL606	4467492	-1	0	alignment_overlap=7	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__69476__1__REL606__4467499__0__7____36__36__0__1	max_left=12	max_left_minus=0	max_left_plus=12	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=0	max_right_plus=17	min_overlap_score=12	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	297		REL606	69514	-1	REL606	2513869	-1	0	alignment_overlap=16	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__69514__0__REL606__2513885__0__16____36__36__0__1	max_left=14	max_left_minus=14	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=6	max_min_right_plus=0	max_right=6	max_right_minus=6	max_right_plus=0	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=16	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	203		REL606	69619	-1	REL606	218940	1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__69619__0__REL606__218939__1__1____36__36__0__0	max_left=32	max_left_minus=32	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	37		REL606	74408	-1	REL606	3398602	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=14	flanking_left=36	flanking_right=36	key=REL606__74408__0__REL606__3398610__0__8____36__36__0__1	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=43	pos_hash_score=9	reject=NJ	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=14	total_reads=14
JC	183		REL606	74940	1	REL606	252787	-1	0	alignment_overlap=15	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__74940__1__REL606__252802__0__15____36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=5	max_min_right_minus=5	max_min_right_plus=0	max_right=5	max_right_minus=5	max_right_plus=0	min_overlap_score=5	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=15	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	118		REL606	74991	1	REL606	4530675	1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__74991__1__REL606__4530675__1__0____36__36__0__0	max_left=32	max_left_minus=0	max_left_plus=32	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=16	max_min_right_minus=0	max_min_right_plus=16	max_right=16	max_right_minus=0	max_right_plus=16	min_overlap_score=17	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	160		REL606	75027	-1	REL606	4596863	1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__75027__0__REL606__4596863__1__0____36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=0	max_min_left=15	max_min_left_minus=15	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=17	max_right_plus=0	min_overlap_score=15	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	67		REL606	77866	1	REL606	985488	-1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=10	flanking_left=36	flanking_right=36	key=REL606__77866__1__REL606__985499__0__11____36__36__0__0	max_left=25	max_left_minus=0	max_left_plus=25	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=22	max_right_minus=0	max_right_plus=22	min_overlap_score=46	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	181		REL606	85036	-1	REL606	671427	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__85036__0__REL606__671435__0__8____36__36__0__1	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	281		REL606	85036	-1	REL606	462116	-1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__85036__0__REL606__462124__0__8____36__36__0__1	max_left=1	max_left_minus=1	max_left_plus=0	max_min_left=1	max_min_left_minus=1	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=26	max_right_minus=26	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	158		REL606	107298	-1	REL606	349741	-1	-6	alignment_overlap=-6	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__107298__0__REL606__349741__0__-6__AGCCAG__36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=13	max_right_minus=0	max_right_plus=13	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=AGCCAG
JC	153		REL606	147158	1	REL606	2466926	1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__147158__1__REL606__2466924__1__2____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=16	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=13	max_min_right_plus=13	max_right=13	max_right_minus=13	max_right_plus=13	min_overlap_score=26	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	120		REL606	174573	-1	REL606	1044003	-1	-1	alignment_overlap=-1	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__174573__0__REL606__1044003__0__-1__T__36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=15	max_right_minus=0	max_right_plus=15	min_overlap_score=26	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=T
JC	185		REL606	219530	-1	REL606	271218	-1	-1	alignment_overlap=-1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__219530__0__REL606__271218__0__-1__C__36__36__0__0	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=30	max_right_minus=0	max_right_plus=30	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=C
JC	163		REL606	225735	-1	REL606	3017032	1	-1	alignment_overlap=-1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__225735__0__REL606__3017032__1__-1__C__36__36__0__0	max_left=13	max_left_minus=13	max_left_plus=0	max_min_left=13	max_min_left_minus=13	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=16	max_right_minus=16	max_right_plus=0	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=C
JC	273		REL606	230431	1	REL606	2703151	1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__230431__1__REL606__2703151__1__0____36__36__0__1	max_left=33	max_left_minus=33	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=2	max_min_right_plus=0	max_right=2	max_right_minus=2	max_right_plus=0	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	2		REL606	241691	1	REL606	3893554	1	0	alignment_overlap=2	coverage_minus=39	coverage_plus=30	flanking_left=36	flanking_right=36	key=REL606__241691__1__REL606__3893552__1__2____36__36__1__1	max_left=32	max_left_minus=32	max_left_plus=32	max_min_left=16	max_min_left_minus=16	max_min_left_plus=16	max_min_right=17	max_min_right_minus=17	max_min_right_plus=16	max_right=33	max_right_minus=33	max_right_plus=33	min_overlap_score=584	pos_hash_score=40	side_1_annotate_key=repeat	side_1_overlap=2	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=69	total_reads=123
JC	192		REL606	248720	1	REL606	1059095	-1	0	alignment_overlap=14	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__248720__1__REL606__1059109__0__14____36__36__0__1	max_left=13	max_left_minus=2	max_left_plus=13	max_min_left=2	max_min_left_minus=2	max_min_left_plus=0	max_min_right=9	max_min_right_minus=0	max_min_right_plus=9	max_right=20	max_right_minus=20	max_right_plus=9	min_overlap_score=11	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=14	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	301		REL606	252715	-1	REL606	480988	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__252715__0__REL606__480989__0__1____36__36__0__1	max_left=4	max_left_minus=0	max_left_plus=4	max_min_left=4	max_min_left_minus=0	max_min_left_plus=4	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=4	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	255		REL606	252720	-1	REL606	252871	-1	0	alignment_overlap=3	coverage_minus=2	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__252720__0__REL606__252874__0__3____36__36__0__1	max_left=1	max_left_minus=1	max_left_plus=1	max_min_left=1	max_min_left_minus=1	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=32	max_right_minus=32	max_right_plus=28	min_overlap_score=3	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=3	total_reads=1
JC	291		REL606	252720	-1	REL606	4198107	-1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__252720__0__REL606__4198111__0__4____36__36__0__0	max_left=2	max_left_minus=2	max_left_plus=0	max_min_left=2	max_min_left_minus=2	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=28	max_right_plus=0	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	201		REL606	252762	1	REL606	2187784	1	0	alignment_overlap=12	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__252762__1__REL606__2187772__1__12____36__36__0__0	max_left=23	max_left_minus=23	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=12	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	242		REL606	252776	-1	REL606	3073751	1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__252776__0__REL606__3073751__1__0____36__36__0__0	max_left=18	max_left_minus=0	max_left_plus=18	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=13	max_right_minus=0	max_right_plus=13	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	253		REL606	252776	1	REL606	4603526	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__252776__1__REL606__4603527__0__1____36__36__0__1	max_left=33	max_left_minus=33	max_left_plus=3	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=32	max_right_minus=3	max_right_plus=32	min_overlap_score=6	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	282		REL606	252778	1	REL606	312589	1	-1	alignment_overlap=-1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__252778__1__REL606__312589__1__-1__G__36__36__0__0	max_left=4	max_left_minus=4	max_left_plus=0	max_min_left=4	max_min_left_minus=4	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=30	max_right_minus=30	max_right_plus=0	min_overlap_score=4	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=G
JC	198		REL606	252783	1	REL606	3073747	-1	0	alignment_overlap=2	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__252785__1__REL606__3073747__0__2____36__36__1__0	max_left=32	max_left_minus=0	max_left_plus=32	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=0	max_min_right_plus=1	max_right=1	max_right_minus=0	max_right_plus=1	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	285		REL606	252802	-1	REL606	252904	1	0	alignment_overlap=15	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__252802__0__REL606__252889__1__15____36__36__0__1	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=16	max_right_minus=0	max_right_plus=16	min_overlap_score=15	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=15	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	234		REL606	252883	1	REL606	312591	1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__252883__1__REL606__312591__1__0____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=16	max_min_left_minus=16	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=19	max_right_minus=19	max_right_plus=0	min_overlap_score=16	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	288		REL606	312589	-1	REL606	2513841	-1	0	alignment_overlap=5	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__312589__0__REL606__2513846__0__5____36__36__0__0	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=29	max_right_minus=0	max_right_plus=29	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	195		REL606	312591	1	REL606	523517	1	0	alignment_overlap=10	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__312591__1__REL606__523507__1__10____36__36__0__1	max_left=9	max_left_minus=0	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=0	max_right_plus=17	min_overlap_score=9	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	217		REL606	312591	1	REL606	333730	-1	0	alignment_overlap=13	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__312591__1__REL606__333743__0__13____36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=8	max_min_right_minus=0	max_min_right_plus=8	max_right=8	max_right_minus=0	max_right_plus=8	min_overlap_score=8	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=13	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	303		REL606	312591	1	REL606	1001451	-1	0	alignment_overlap=13	coverage_minus=1	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__312591__1__REL606__1001464__0__13____36__36__0__0	max_left=10	max_left_minus=1	max_left_plus=10	max_min_left=2	max_min_left_minus=1	max_min_left_plus=2	max_min_right=9	max_min_right_minus=0	max_min_right_plus=9	max_right=21	max_right_minus=21	max_right_plus=21	min_overlap_score=12	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=13	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=3	total_reads=1
JC	100		REL606	312594	1	REL606	2583282	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=5	flanking_left=36	flanking_right=36	key=REL606__312594__1__REL606__2583282__0__0____36__36__0__0	max_left=32	max_left_minus=32	max_left_plus=21	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=17	max_min_right_minus=3	max_min_right_plus=17	max_right=17	max_right_minus=3	max_right_plus=17	min_overlap_score=84	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=6	total_reads=5
JC	105		REL606	312594	1	REL606	3150232	1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=5	flanking_left=36	flanking_right=36	key=REL606__312594__1__REL606__3150221__1__11____36__36__0__0	max_left=13	max_left_minus=0	max_left_plus=13	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=12	max_min_right_minus=0	max_min_right_plus=12	max_right=21	max_right_minus=0	max_right_plus=21	min_overlap_score=42	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=4
JC	229		REL606	312608	1	REL606	1160554	-1	-6	alignment_overlap=-6	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__312608__1__REL606__1160554__0__-6__TTACGC__36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=2	max_min_right_plus=0	max_right=2	max_right_minus=2	max_right_plus=0	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=TTACGC
JC	197		REL606	312621	-1	REL606	2489151	1	0	alignment_overlap=7	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__312621__0__REL606__2489144__1__7____36__36__0__0	max_left=24	max_left_minus=24	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=3	max_right_minus=3	max_right_plus=0	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	232		REL606	312625	-1	REL606	4031812	1	0	alignment_overlap=7	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__312625__0__REL606__4031805__1__7____36__36__0__0	max_left=20	max_left_minus=0	max_left_plus=20	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=0	max_min_right_plus=6	max_right=6	max_right_minus=0	max_right_plus=6	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	244		REL606	312625	-1	REL606	4198076	-1	0	alignment_overlap=16	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__312625__0__REL606__4198092__0__16____36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=0	max_min_right_plus=6	max_right=6	max_right_minus=0	max_right_plus=6	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=16	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	295		REL606	312625	-1	REL606	1001487	1	0	alignment_overlap=17	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__312625__0__REL606__1001470__1__17____36__36__0__0	max_left=7	max_left_minus=0	max_left_plus=7	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=12	max_right_minus=0	max_right_plus=12	min_overlap_score=7	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=17	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	133		REL606	312626	-1	REL606	4603893	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__312626__0__REL606__4603902__0__9____36__36__0__0	max_left=22	max_left_minus=22	max_left_plus=20	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=5	max_min_right_minus=5	max_min_right_plus=3	max_right=5	max_right_minus=5	max_right_plus=3	min_overlap_score=8	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	166		REL606	322250	1	REL606	322621	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__322250__1__REL606__322622__0__1____36__36__0__0	max_left=23	max_left_minus=23	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=8	max_min_right_minus=8	max_min_right_plus=0	max_right=8	max_right_minus=8	max_right_plus=0	min_overlap_score=8	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	302		REL606	330032	1	REL606	330430	-1	-1	alignment_overlap=-1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__330032__1__REL606__330430__0__-1__C__36__36__1__0	max_left=5	max_left_minus=5	max_left_plus=0	max_min_left=5	max_min_left_minus=5	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=30	max_right_minus=30	max_right_plus=0	min_overlap_score=5	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=C
JC	124		REL606	347017	-1	REL606	3209939	1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__347017__0__REL606__3209935__1__4____36__36__0__0	max_left=18	max_left_minus=18	max_left_plus=12	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=14	max_min_right_minus=14	max_min_right_plus=0	max_right=20	max_right_minus=14	max_right_plus=20	min_overlap_score=26	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	307		REL606	347558	1	REL606	4304636	-1	0	alignment_overlap=16	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__347558__1__REL606__4304652__0__16____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=4	max_min_right_minus=4	max_min_right_plus=0	max_right=4	max_right_minus=4	max_right_plus=0	min_overlap_score=4	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=16	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	182		REL606	349677	1	REL606	4603827	-1	0	alignment_overlap=3	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__349677__1__REL606__4603830__0__3____36__36__0__0	max_left=28	max_left_minus=0	max_left_plus=28	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=5	max_min_right_minus=0	max_min_right_plus=5	max_right=29	max_right_minus=0	max_right_plus=29	min_overlap_score=7	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	271		REL606	349677	1	REL606	4228286	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__349677__1__REL606__4228287__0__1____36__36__0__0	max_left=19	max_left_minus=19	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=13	max_min_right_plus=0	max_right=13	max_right_minus=13	max_right_plus=0	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	235		REL606	349686	1	REL606	379693	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__349686__1__REL606__379693__0__0____36__36__0__1	max_left=22	max_left_minus=2	max_left_plus=22	max_min_left=2	max_min_left_minus=2	max_min_left_plus=0	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=34	max_right_minus=34	max_right_plus=13	min_overlap_score=15	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	231		REL606	349741	-1	REL606	1458298	-1	-5	alignment_overlap=-5	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__349741__0__REL606__1458298__0__-5__CTGGC__36__36__0__0	max_left=0	max_left_minus=0	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=31	max_right_minus=0	max_right_plus=31	min_overlap_score=-1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=CTGGC
JC	27		REL606	376749	1	REL606	2137411	1	0	alignment_overlap=1	coverage_minus=20	coverage_plus=18	flanking_left=36	flanking_right=36	key=REL606__376748__1__REL606__2137411__1__1____36__36__1__0	max_left=33	max_left_minus=33	max_left_plus=31	max_min_left=14	max_min_left_minus=14	max_min_left_plus=13	max_min_right=16	max_min_right_minus=16	max_min_right_plus=15	max_right=34	max_right_minus=23	max_right_plus=34	min_overlap_score=360	pos_hash_score=29	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=1	side_2_redundant=0	total_non_overlap_reads=38	total_reads=48
JC	199		REL606	377856	-1	REL606	2409705	-1	-1	alignment_overlap=-1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__377856__0__REL606__2409705__0__-1__T__36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=14	max_min_right_plus=0	max_right=14	max_right_minus=14	max_right_plus=0	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=T
JC	278		REL606	377856	-1	REL606	1691504	1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__377856__0__REL606__1691504__1__0____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=16	max_min_left_minus=16	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=17	max_right_plus=0	min_overlap_score=16	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	309		REL606	379594	1	REL606	480688	-1	0	alignment_overlap=4	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__379598__1__REL606__480688__0__4____36__36__1__0	max_left=3	max_left_minus=0	max_left_plus=3	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=4	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	190		REL606	379637	-1	REL606	3202784	1	0	alignment_overlap=12	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__379637__0__REL606__3202772__1__12____36__36__0__1	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=23	max_right_minus=0	max_right_plus=23	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=12	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	245		REL606	379694	-1	REL606	2583281	-1	0	alignment_overlap=2	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__379692__0__REL606__2583281__0__2____36__36__1__0	max_left=31	max_left_minus=0	max_left_plus=31	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=1	max_min_right_minus=0	max_min_right_plus=1	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=3	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	98		REL606	383086	-1	REL606	662940	1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=5	flanking_left=36	flanking_right=36	key=REL606__383086__0__REL606__662931__1__9____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=21	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5
JC	258		REL606	389962	-1	REL606	3109332	-1	0	alignment_overlap=6	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__389962__0__REL606__3109338__0__6____36__36__0__0	max_left=2	max_left_minus=0	max_left_plus=2	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	213		REL606	396907	-1	REL606	3941459	1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__396907__0__REL606__3941457__1__2____36__36__0__0	max_left=31	max_left_minus=31	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	284		REL606	402764	1	REL606	1702474	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__402764__1__REL606__1702475__0__1____36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=15	max_min_right_minus=0	max_min_right_plus=15	max_right=15	max_right_minus=0	max_right_plus=15	min_overlap_score=15	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	59		REL606	424011	1	REL606	3200024	1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=10	flanking_left=36	flanking_right=36	key=REL606__424011__1__REL606__3200023__1__1____36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=15	max_min_left_minus=0	max_min_left_plus=15	max_min_right=15	max_min_right_minus=0	max_min_right_plus=15	max_right=33	max_right_minus=0	max_right_plus=33	min_overlap_score=85	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	16		REL606	429502	1	REL606	2448493	1	0	alignment_overlap=5	coverage_minus=27	coverage_plus=27	flanking_left=36	flanking_right=36	key=REL606__429500__1__REL606__2448490__1__5____36__36__1__0	max_left=30	max_left_minus=30	max_left_plus=30	max_min_left=15	max_min_left_minus=15	max_min_left_plus=14	max_min_right=15	max_min_right_minus=15	max_min_right_plus=14	max_right=29	max_right_minus=28	max_right_plus=29	min_overlap_score=460	pos_hash_score=34	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=54	total_reads=69
JC	24		REL606	430844	-1	REL606	2322346	-1	0	alignment_overlap=5	coverage_minus=19	coverage_plus=16	flanking_left=36	flanking_right=36	key=REL606__430846__0__REL606__2322349__0__5____36__36__1__0	max_left=22	max_left_minus=21	max_left_plus=22	max_min_left=15	max_min_left_minus=15	max_min_left_plus=13	max_min_right=14	max_min_right_minus=14	max_min_right_plus=14	max_right=30	max_right_minus=29	max_right_plus=30	min_overlap_score=295	pos_hash_score=26	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=35	total_reads=51
JC	81		REL606	441136	1	REL606	2739189	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=7	flanking_left=36	flanking_right=36	key=REL606__441136__1__REL606__2739198__0__9____36__36__0__0	max_left=7	max_left_minus=0	max_left_plus=7	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=26	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	279		REL606	462025	1	REL606	523517	1	0	alignment_overlap=10	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__462025__1__REL606__523507__1__10____36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=10	max_min_right_minus=0	max_min_right_plus=10	max_right=10	max_right_minus=0	max_right_plus=10	min_overlap_score=10	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	146		REL606	462108	-1	REL606	917528	-1	0	alignment_overlap=8	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__462108__0__REL606__917536__0__8____36__36__0__1	max_left=5	max_left_minus=5	max_left_plus=0	max_min_left=5	max_min_left_minus=5	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=23	max_right_minus=23	max_right_plus=0	min_overlap_score=10	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=2
JC	240		REL606	462130	-1	REL606	2575506	-1	0	alignment_overlap=6	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__462124__0__REL606__2575506__0__6____36__36__1__0	max_left=27	max_left_minus=27	max_left_plus=26	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=3	max_right=3	max_right_minus=3	max_right_plus=3	min_overlap_score=6	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=6	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	294		REL606	473524	-1	REL606	2928095	-1	0	alignment_overlap=6	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__473524__0__REL606__2928101__0__6____36__36__0__1	max_left=3	max_left_minus=0	max_left_plus=3	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	32		REL606	473654	-1	REL606	3647434	-1	0	alignment_overlap=6	coverage_minus=0	coverage_plus=18	flanking_left=36	flanking_right=36	key=REL606__473654__0__REL606__3647440__0__6____36__36__0__0	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=29	max_right_minus=0	max_right_plus=29	min_overlap_score=76	pos_hash_score=14	reject=NJ	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=18	total_reads=18
JC	165		REL606	480683	-1	REL606	4074113	1	-4	alignment_overlap=-4	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__480683__0__REL606__4074113__1__-4__GCCG__36__36__0__0	max_left=23	max_left_minus=0	max_left_plus=23	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=0	max_min_right_plus=9	max_right=9	max_right_minus=0	max_right_plus=9	min_overlap_score=9	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=GCCG
JC	211		REL606	480737	-1	REL606	3320287	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=3	flanking_left=36	flanking_right=36	key=REL606__480736__0__REL606__3320287__0__1____36__36__1__0	max_left=26	max_left_minus=0	max_left_plus=26	max_min_left=11	max_min_left_minus=0	max_min_left_plus=11	max_min_right=1	max_min_right_minus=0	max_min_right_plus=1	max_right=34	max_right_minus=0	max_right_plus=34	min_overlap_score=13	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=1	side_2_redundant=0	total_non_overlap_reads=3	total_reads=1
JC	283		REL606	482633	1	REL606	3940120	1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__482633__1__REL606__3940120__1__0____36__36__0__0	max_left=19	max_left_minus=0	max_left_plus=19	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=0	max_min_right_plus=14	max_right=14	max_right_minus=0	max_right_plus=14	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	79		REL606	503249	1	REL606	2793152	1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=7	flanking_left=36	flanking_right=36	key=REL606__503249__1__REL606__2793152__1__0____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=35	max_right_minus=0	max_right_plus=35	min_overlap_score=17	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	57		REL606	506206	-1	REL606	986554	-1	0	alignment_overlap=7	coverage_minus=10	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__506206__0__REL606__986561__0__7____36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=8	max_min_right_minus=8	max_min_right_plus=0	max_right=8	max_right_minus=8	max_right_plus=0	min_overlap_score=48	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	101		REL606	510856	-1	REL606	2717732	-1	-6	alignment_overlap=-6	coverage_minus=0	coverage_plus=6	flanking_left=36	flanking_right=36	key=REL606__510856__0__REL606__2717732__0__-6__CTCGAA__36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=14	max_min_left_minus=0	max_min_left_plus=14	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=35	max_right_minus=0	max_right_plus=35	min_overlap_score=65	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=6	total_reads=5	unique_read_sequence=CTCGAA
JC	88		REL606	513991	-1	REL606	3125273	1	0	alignment_overlap=10	coverage_minus=16	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__513991__0__REL606__3125263__1__10____36__36__0__0	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=10	max_min_right_minus=10	max_min_right_plus=0	max_right=10	max_right_minus=10	max_right_plus=0	min_overlap_score=68	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=16	total_reads=6
JC	221		REL606	521012	-1	REL606	2852266	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__521012__0__REL606__2852267__0__1____36__36__0__0	max_left=12	max_left_minus=12	max_left_plus=0	max_min_left=12	max_min_left_minus=12	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=15	max_right_minus=15	max_right_plus=0	min_overlap_score=12	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	186		REL606	523507	1	REL606	2987366	1	0	alignment_overlap=10	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__523507__1__REL606__2987356__1__10____36__36__0__0	max_left=1	max_left_minus=1	max_left_plus=0	max_min_left=1	max_min_left_minus=1	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=24	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	224		REL606	523518	1	REL606	1668718	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__523518__1__REL606__1668718__0__0____36__36__0__1	max_left=1	max_left_minus=1	max_left_plus=0	max_min_left=1	max_min_left_minus=1	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=35	max_right_minus=35	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	138		REL606	523620	-1	REL606	4005791	1	-8	alignment_overlap=-8	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__523620__0__REL606__4005791__1__-8__GGTGCACG__36__36__0__0	max_left=17	max_left_minus=17	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=11	max_min_right_minus=11	max_min_right_plus=0	max_right=11	max_right_minus=11	max_right_plus=0	min_overlap_score=22	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=GGTGCACG
JC	11		REL606	555924	1	REL606	2035093	-1	0	alignment_overlap=4	coverage_minus=31	coverage_plus=30	flanking_left=36	flanking_right=36	key=REL606__555924__1__REL606__2035097__0__4____36__36__1__1	max_left=31	max_left_minus=31	max_left_plus=31	max_min_left=15	max_min_left_minus=12	max_min_left_plus=15	max_min_right=16	max_min_right_minus=16	max_min_right_plus=15	max_right=31	max_right_minus=31	max_right_plus=30	min_overlap_score=472	pos_hash_score=35	side_1_annotate_key=repeat	side_1_overlap=4	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=61	total_reads=82
JC	93		REL606	576176	-1	REL606	1481507	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=5	flanking_left=36	flanking_right=36	key=REL606__576176__0__REL606__1481516__0__9____36__36__0__0	max_left=7	max_left_minus=0	max_left_plus=7	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=25	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5
JC	25		REL606	576325	1	REL606	576330	-1	0	alignment_overlap=0	coverage_minus=32	coverage_plus=18	flanking_left=36	flanking_right=36	key=REL606__576325__1__REL606__576330__0__0____36__36__0__0	max_left=35	max_left_minus=35	max_left_plus=34	max_min_left=17	max_min_left_minus=17	max_min_left_plus=17	max_min_right=18	max_min_right_minus=15	max_min_right_plus=18	max_right=33	max_right_minus=33	max_right_plus=33	min_overlap_score=464	pos_hash_score=37	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=50	total_reads=51
JC	108		REL606	580321	-1	REL606	712784	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=3	flanking_left=36	flanking_right=36	key=REL606__580321__0__REL606__712793__0__9____36__36__0__0	max_left=4	max_left_minus=3	max_left_plus=4	max_min_left=4	max_min_left_minus=3	max_min_left_plus=4	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=24	max_right_plus=24	min_overlap_score=14	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=4
JC	3		REL606	588495	1	REL606	3015771	1	0	alignment_overlap=2	coverage_minus=31	coverage_plus=36	flanking_left=36	flanking_right=36	key=REL606__588495__1__REL606__3015769__1__2____36__36__0__1	max_left=33	max_left_minus=33	max_left_plus=32	max_min_left=16	max_min_left_minus=15	max_min_left_plus=16	max_min_right=17	max_min_right_minus=16	max_min_right_plus=17	max_right=33	max_right_minus=32	max_right_plus=33	min_overlap_score=609	pos_hash_score=42	side_1_annotate_key=repeat	side_1_overlap=2	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=67	total_reads=112
JC	13		REL606	588495	1	REL606	1733647	1	0	alignment_overlap=4	coverage_minus=30	coverage_plus=28	flanking_left=36	flanking_right=36	key=REL606__588493__1__REL606__1733645__1__4____36__36__1__0	max_left=31	max_left_minus=31	max_left_plus=29	max_min_left=14	max_min_left_minus=13	max_min_left_plus=14	max_min_right=16	max_min_right_minus=16	max_min_right_plus=15	max_right=31	max_right_minus=31	max_right_plus=31	min_overlap_score=478	pos_hash_score=39	side_1_annotate_key=repeat	side_1_overlap=2	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=58	total_reads=78
JC	21		REL606	588495	1	REL606	1270660	1	0	alignment_overlap=2	coverage_minus=25	coverage_plus=26	flanking_left=36	flanking_right=36	key=REL606__588495__1__REL606__1270658__1__2____36__36__1__1	max_left=32	max_left_minus=32	max_left_plus=31	max_min_left=16	max_min_left_minus=16	max_min_left_plus=15	max_min_right=17	max_min_right_minus=17	max_min_right_plus=16	max_right=32	max_right_minus=27	max_right_plus=32	min_overlap_score=496	pos_hash_score=35	side_1_annotate_key=repeat	side_1_overlap=2	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=51	total_reads=55
JC	22		REL606	590471	-1	REL606	1269593	-1	0	alignment_overlap=2	coverage_minus=22	coverage_plus=22	flanking_left=36	flanking_right=36	key=REL606__590473__0__REL606__1269593__0__2____36__36__1__1	max_left=33	max_left_minus=27	max_left_plus=33	max_min_left=16	max_min_left_minus=16	max_min_left_plus=16	max_min_right=17	max_min_right_minus=17	max_min_right_plus=16	max_right=33	max_right_minus=23	max_right_plus=33	min_overlap_score=470	pos_hash_score=31	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=2	side_2_redundant=1	total_non_overlap_reads=44	total_reads=54
JC	18		REL606	590715	1	REL606	2448498	-1	0	alignment_overlap=4	coverage_minus=28	coverage_plus=31	flanking_left=36	flanking_right=36	key=REL606__590714__1__REL606__2448501__0__4____36__36__1__0	max_left=31	max_left_minus=30	max_left_plus=31	max_min_left=15	max_min_left_minus=15	max_min_left_plus=15	max_min_right=15	max_min_right_minus=15	max_min_right_plus=15	max_right=31	max_right_minus=30	max_right_plus=31	min_overlap_score=453	pos_hash_score=39	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=1	side_2_redundant=0	total_non_overlap_reads=59	total_reads=66
JC	39		REL606	599121	-1	REL606	4451470	1	0	alignment_overlap=7	coverage_minus=13	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__599121__0__REL606__4451463__1__7____36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=9	max_right_minus=9	max_right_plus=0	min_overlap_score=46	pos_hash_score=11	reject=NJ	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=13	total_reads=13
JC	175		REL606	614848	-1	REL606	2583281	-1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__614846__0__REL606__2583281__0__2____36__36__1__0	max_left=27	max_left_minus=27	max_left_plus=2	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=4	max_min_right_minus=4	max_min_right_plus=0	max_right=25	max_right_minus=4	max_right_plus=25	min_overlap_score=6	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	14		REL606	619117	1	REL606	3595772	-1	0	alignment_overlap=2	coverage_minus=36	coverage_plus=20	flanking_left=36	flanking_right=36	key=REL606__619115__1__REL606__3595772__0__2____36__36__1__1	max_left=33	max_left_minus=33	max_left_plus=32	max_min_left=16	max_min_left_minus=16	max_min_left_plus=16	max_min_right=17	max_min_right_minus=17	max_min_right_plus=17	max_right=33	max_right_minus=33	max_right_plus=33	min_overlap_score=483	pos_hash_score=36	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=2	side_2_redundant=1	total_non_overlap_reads=56	total_reads=74
JC	87		REL606	628787	1	REL606	4579611	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=6	flanking_left=36	flanking_right=36	key=REL606__628787__1__REL606__4579619__0__8____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=23	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=6	total_reads=6
JC	225		REL606	631010	-1	REL606	4224507	1	0	alignment_overlap=4	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__631010__0__REL606__4224503__1__4____36__36__0__0	max_left=16	max_left_minus=0	max_left_plus=16	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=0	max_min_right_plus=7	max_right=7	max_right_minus=0	max_right_plus=7	min_overlap_score=7	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	80		REL606	638666	1	REL606	4038529	1	0	alignment_overlap=7	coverage_minus=7	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__638666__1__REL606__4038522__1__7____36__36__0__0	max_left=23	max_left_minus=23	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=10	max_min_right_minus=10	max_min_right_plus=0	max_right=10	max_right_minus=10	max_right_plus=0	min_overlap_score=66	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	42		REL606	657139	-1	REL606	1524727	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=13	flanking_left=36	flanking_right=36	key=REL606__657139__0__REL606__1524735__0__8____36__36__0__0	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=44	pos_hash_score=10	reject=NJ	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=13	total_reads=13
JC	150		REL606	665834	1	REL606	1151716	1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__665836__1__REL606__1151716__1__2____36__36__1__0	max_left=16	max_left_minus=16	max_left_plus=16	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=15	max_min_right_minus=15	max_min_right_plus=15	max_right=15	max_right_minus=15	max_right_plus=15	min_overlap_score=30	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	7		REL606	666130	-1	REL606	1821527	-1	0	alignment_overlap=1	coverage_minus=33	coverage_plus=28	flanking_left=36	flanking_right=36	key=REL606__666130__0__REL606__1821528__0__1____36__36__1__0	max_left=32	max_left_minus=32	max_left_plus=32	max_min_left=17	max_min_left_minus=17	max_min_left_plus=17	max_min_right=17	max_min_right_minus=17	max_min_right_plus=16	max_right=34	max_right_minus=34	max_right_plus=33	min_overlap_score=589	pos_hash_score=40	side_1_annotate_key=repeat	side_1_overlap=1	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=61	total_reads=92
JC	17		REL606	666130	-1	REL606	1733649	-1	0	alignment_overlap=1	coverage_minus=29	coverage_plus=35	flanking_left=36	flanking_right=36	key=REL606__666131__0__REL606__1733649__0__1____36__36__1__0	max_left=34	max_left_minus=30	max_left_plus=34	max_min_left=17	max_min_left_minus=17	max_min_left_plus=17	max_min_right=16	max_min_right_minus=16	max_min_right_plus=15	max_right=34	max_right_minus=34	max_right_plus=33	min_overlap_score=590	pos_hash_score=41	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=1	side_2_redundant=0	total_non_overlap_reads=64	total_reads=66
JC	287		REL606	678637	1	REL606	2097995	1	0	alignment_overlap=6	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__678637__1__REL606__2097989__1__6____36__36__0__0	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	222		REL606	689874	1	REL606	1001470	1	0	alignment_overlap=4	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__689878__1__REL606__1001470__1__4____36__36__1__0	max_left=12	max_left_minus=0	max_left_plus=12	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=0	max_right_plus=17	min_overlap_score=12	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=4	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	34		REL606	705249	-1	REL606	4503742	-1	0	alignment_overlap=7	coverage_minus=2	coverage_plus=13	flanking_left=36	flanking_right=36	key=REL606__705249__0__REL606__4503749__0__7____36__36__0__0	max_left=8	max_left_minus=8	max_left_plus=8	max_min_left=8	max_min_left_minus=8	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=25	max_right_plus=27	min_overlap_score=80	pos_hash_score=10	reject=NJ	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=15	total_reads=15
JC	207		REL606	712195	1	REL606	714068	1	0	alignment_overlap=2	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__712195__1__REL606__714066__1__2____36__36__1__1	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=14	max_min_left_minus=0	max_min_left_plus=14	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=32	max_right_minus=0	max_right_plus=32	min_overlap_score=15	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=2	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	117		REL606	712252	-1	REL606	2108800	-1	0	alignment_overlap=13	coverage_minus=11	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__712252__0__REL606__2108813__0__13____36__36__0__1	max_left=19	max_left_minus=19	max_left_plus=0	max_min_left=10	max_min_left_minus=10	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=13	max_right_minus=13	max_right_plus=0	min_overlap_score=44	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=13	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=11	total_reads=3
JC	230		REL606	714136	-1	REL606	2108813	-1	0	alignment_overlap=13	coverage_minus=15	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__714123__0__REL606__2108813__0__13____36__36__1__0	max_left=22	max_left_minus=22	max_left_plus=0	max_min_left=10	max_min_left_minus=10	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=13	max_right_minus=13	max_right_plus=0	min_overlap_score=49	pos_hash_score=10	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=13	side_2_redundant=0	total_non_overlap_reads=15	total_reads=1
JC	99		REL606	724602	-1	REL606	780597	1	0	alignment_overlap=0	coverage_minus=5	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__724602__0__REL606__780597__1__0____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=16	max_min_left_minus=16	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=18	max_right_minus=18	max_right_plus=0	min_overlap_score=67	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5
JC	226		REL606	739250	-1	REL606	2255144	-1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__739239__0__REL606__2255144__0__11____36__36__1__0	max_left=18	max_left_minus=18	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=3	max_right_minus=3	max_right_plus=0	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=11	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	64		REL606	767246	1	REL606	3375092	1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=10	flanking_left=36	flanking_right=36	key=REL606__767246__1__REL606__3375084__1__8____36__36__0__0	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=43	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	126		REL606	767638	1	REL606	1748603	-1	-5	alignment_overlap=-5	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__767638__1__REL606__1748603__0__-5__AGCAA__36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=15	max_min_right_minus=0	max_min_right_plus=15	max_right=33	max_right_minus=0	max_right_plus=33	min_overlap_score=11	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=AGCAA
JC	66		REL606	767783	-1	REL606	1965846	-1	0	alignment_overlap=6	coverage_minus=10	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__767783__0__REL606__1965852__0__6____36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=8	max_min_right_minus=8	max_min_right_plus=0	max_right=8	max_right_minus=8	max_right_plus=0	min_overlap_score=63	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	107		REL606	774282	-1	REL606	4303491	1	0	alignment_overlap=12	coverage_minus=1	coverage_plus=8	flanking_left=36	flanking_right=36	key=REL606__774282__0__REL606__4303479__1__12____36__36__0__0	max_left=8	max_left_minus=2	max_left_plus=8	max_min_left=8	max_min_left_minus=2	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=21	max_right_minus=21	max_right_plus=18	min_overlap_score=54	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=12	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=9	total_reads=4
JC	52		REL606	829370	1	REL606	962878	1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=11	flanking_left=36	flanking_right=36	key=REL606__829370__1__REL606__962869__1__9____36__36__0__0	max_left=5	max_left_minus=0	max_left_plus=5	max_min_left=5	max_min_left_minus=0	max_min_left_plus=5	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=43	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	228		REL606	838252	1	REL606	2583282	-1	0	alignment_overlap=3	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__838255__1__REL606__2583282__0__3____36__36__1__0	max_left=30	max_left_minus=30	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=3	max_right_minus=3	max_right_plus=0	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=3	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	142		REL606	838285	1	REL606	1713200	-1	0	alignment_overlap=5	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__838285__1__REL606__1713205__0__5____36__36__0__0	max_left=7	max_left_minus=7	max_left_plus=0	max_min_left=7	max_min_left_minus=7	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=27	max_right_plus=0	min_overlap_score=10	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	157		REL606	838285	1	REL606	3605636	-1	0	alignment_overlap=3	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__838285__1__REL606__3605639__0__3____36__36__0__1	max_left=5	max_left_minus=5	max_left_plus=0	max_min_left=5	max_min_left_minus=5	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=28	max_right_plus=0	min_overlap_score=5	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	212		REL606	841893	1	REL606	2316489	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__841893__1__REL606__2316489__0__0____36__36__0__1	max_left=1	max_left_minus=1	max_left_plus=0	max_min_left=1	max_min_left_minus=1	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=33	max_right_minus=33	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	130		REL606	851214	-1	REL606	851226	-1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__851214__0__REL606__851234__0__8____36__36__0__0	max_left=17	max_left_minus=17	max_left_plus=13	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=11	max_min_right_minus=11	max_min_right_plus=0	max_right=15	max_right_minus=11	max_right_plus=15	min_overlap_score=24	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	180		REL606	889738	1	REL606	3709637	-1	-4	alignment_overlap=-4	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__889738__1__REL606__3709637__0__-4__GCCA__36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=15	max_min_right_minus=0	max_min_right_plus=15	max_right=15	max_right_minus=0	max_right_plus=15	min_overlap_score=15	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=GCCA
JC	144		REL606	916478	-1	REL606	4228260	1	0	alignment_overlap=4	coverage_minus=3	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__916478__0__REL606__4228256__1__4____36__36__0__1	max_left=6	max_left_minus=6	max_left_plus=1	max_min_left=6	max_min_left_minus=6	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=28	max_right_plus=27	min_overlap_score=17	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=4	total_reads=2
JC	155		REL606	917456	1	REL606	4603894	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__917456__1__REL606__4603902__0__8____36__36__0__0	max_left=22	max_left_minus=0	max_left_plus=22	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=0	max_min_right_plus=6	max_right=6	max_right_minus=0	max_right_plus=6	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	69		REL606	931840	1	REL606	1761791	-1	0	alignment_overlap=9	coverage_minus=9	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__931840__1__REL606__1761800__0__9____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=6	max_min_right_plus=0	max_right=6	max_right_minus=6	max_right_plus=0	min_overlap_score=31	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=9	total_reads=9
JC	304		REL606	952284	-1	REL606	952395	-1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__952284__0__REL606__952399__0__4____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=2	max_min_right_plus=0	max_right=2	max_right_minus=2	max_right_plus=0	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	125		REL606	955903	1	REL606	4137733	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__955903__1__REL606__4137742__0__9____36__36__0__0	max_left=17	max_left_minus=17	max_left_plus=16	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=11	max_min_right_minus=10	max_min_right_plus=11	max_right=11	max_right_minus=10	max_right_plus=11	min_overlap_score=21	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	51		REL606	986933	1	REL606	3589191	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=11	flanking_left=36	flanking_right=36	key=REL606__986933__1__REL606__3589200__0__9____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=28	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	210		REL606	1001464	-1	REL606	4616929	-1	0	alignment_overlap=4	coverage_minus=2	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1001464__0__REL606__4616933__0__4____36__36__0__1	max_left=30	max_left_minus=30	max_left_plus=30	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=14	max_min_right_minus=14	max_min_right_plus=1	max_right=22	max_right_minus=14	max_right_plus=22	min_overlap_score=27	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=4	total_reads=1
JC	248		REL606	1001464	-1	REL606	1668704	-1	0	alignment_overlap=17	coverage_minus=1	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1001464__0__REL606__1668721__0__17____36__36__0__1	max_left=17	max_left_minus=17	max_left_plus=17	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=2	max_min_right_minus=2	max_min_right_plus=1	max_right=17	max_right_minus=2	max_right_plus=17	min_overlap_score=5	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=17	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=3	total_reads=1
JC	270		REL606	1001464	-1	REL606	1101040	-1	0	alignment_overlap=12	coverage_minus=2	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1001464__0__REL606__1101052__0__12____36__36__0__1	max_left=22	max_left_minus=22	max_left_plus=22	max_min_left=4	max_min_left_minus=2	max_min_left_plus=4	max_min_right=2	max_min_right_minus=2	max_min_right_plus=1	max_right=21	max_right_minus=21	max_right_plus=20	min_overlap_score=9	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=12	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=4	total_reads=1
JC	202		REL606	1001470	1	REL606	4616925	1	0	alignment_overlap=6	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1001470__1__REL606__4616919__1__6____36__36__0__1	max_left=8	max_left_minus=0	max_left_plus=8	max_min_left=8	max_min_left_minus=0	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=22	max_right_minus=0	max_right_plus=22	min_overlap_score=8	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	250		REL606	1001470	1	REL606	2294053	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1001470__1__REL606__2294053__0__0____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=30	max_right_minus=0	max_right_plus=30	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	293		REL606	1001470	1	REL606	4305081	-1	0	alignment_overlap=13	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1001470__1__REL606__4305094__0__13____36__36__0__1	max_left=15	max_left_minus=15	max_left_plus=0	max_min_left=1	max_min_left_minus=1	max_min_left_plus=0	max_min_right=8	max_min_right_minus=8	max_min_right_plus=0	max_right=21	max_right_minus=21	max_right_plus=0	min_overlap_score=9	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=13	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	75		REL606	1009147	1	REL606	1782839	1	0	alignment_overlap=9	coverage_minus=8	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1009147__1__REL606__1782830__1__9____36__36__0__0	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=6	max_min_right_plus=0	max_right=6	max_right_minus=6	max_right_plus=0	min_overlap_score=34	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8
JC	236		REL606	1025663	-1	REL606	4610377	1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1025663__0__REL606__4610377__1__0____36__36__0__0	max_left=19	max_left_minus=0	max_left_plus=19	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=16	max_min_right_minus=0	max_min_right_plus=16	max_right=16	max_right_minus=0	max_right_plus=16	min_overlap_score=16	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	116		REL606	1043606	-1	REL606	4612554	1	0	alignment_overlap=10	coverage_minus=1	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1043606__0__REL606__4612544__1__10____36__36__0__0	max_left=11	max_left_minus=11	max_left_plus=11	max_min_left=11	max_min_left_minus=11	max_min_left_plus=11	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=23	max_right_minus=12	max_right_plus=23	min_overlap_score=23	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=3	total_reads=3
JC	45		REL606	1052707	1	REL606	3433386	1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=12	flanking_left=36	flanking_right=36	key=REL606__1052707__1__REL606__3433378__1__8____36__36__0__0	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=54	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=12	total_reads=12
JC	286		REL606	1059107	-1	REL606	2583282	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1059107__0__REL606__2583282__0__0____36__36__1__0	max_left=22	max_left_minus=0	max_left_plus=22	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=0	max_min_right_plus=14	max_right=14	max_right_minus=0	max_right_plus=14	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	263		REL606	1059110	-1	REL606	2583281	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1059109__0__REL606__2583281__0__1____36__36__1__0	max_left=25	max_left_minus=0	max_left_plus=25	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=9	max_min_right_minus=0	max_min_right_plus=9	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=11	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=1	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	308		REL606	1059112	-1	REL606	3041378	1	0	alignment_overlap=3	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1059109__0__REL606__3041378__1__3____36__36__1__0	max_left=25	max_left_minus=0	max_left_plus=25	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=0	max_min_right_plus=3	max_right=3	max_right_minus=0	max_right_plus=3	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=3	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	161		REL606	1078717	-1	REL606	2056287	-1	-3	alignment_overlap=-3	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1078717__0__REL606__2056287__0__-3__AAG__36__36__1__0	max_left=12	max_left_minus=0	max_left_plus=12	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=14	max_right_minus=0	max_right_plus=14	min_overlap_score=12	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=AAG
JC	227		REL606	1078745	1	REL606	2513849	1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1078745__1__REL606__2513849__1__0____36__36__0__1	max_left=14	max_left_minus=14	max_left_plus=0	max_min_left=14	max_min_left_minus=14	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=22	max_right_minus=22	max_right_plus=0	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	200		REL606	1078750	1	REL606	3150232	1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1078750__1__REL606__3150221__1__11____36__36__0__0	max_left=24	max_left_minus=24	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	110		REL606	1086384	-1	REL606	3297424	-1	0	alignment_overlap=6	coverage_minus=0	coverage_plus=4	flanking_left=36	flanking_right=36	key=REL606__1086384__0__REL606__3297430__0__6____36__36__0__0	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=22	max_right_minus=0	max_right_plus=22	min_overlap_score=38	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=4
JC	35		REL606	1087180	-1	REL606	2583272	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=28	flanking_left=36	flanking_right=36	key=REL606__1087180__0__REL606__2583281__0__9____36__36__0__0	max_left=9	max_left_minus=0	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=97	pos_hash_score=12	reject=NJ	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=28	total_reads=14
JC	269		REL606	1101062	-1	REL606	3073746	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1101062__0__REL606__3073746__0__0____36__36__0__0	max_left=8	max_left_minus=8	max_left_plus=0	max_min_left=8	max_min_left_minus=8	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=28	max_right_plus=0	min_overlap_score=8	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	296		REL606	1101069	-1	REL606	3320062	1	0	alignment_overlap=1	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1101069__0__REL606__3320061__1__1____36__36__0__0	max_left=27	max_left_minus=27	max_left_plus=0	max_min_left=6	max_min_left_minus=6	max_min_left_plus=0	max_min_right=6	max_min_right_minus=6	max_min_right_plus=0	max_right=29	max_right_minus=29	max_right_plus=0	min_overlap_score=12	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	241		REL606	1111788	1	REL606	1112150	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1111788__1__REL606__1112151__0__1____36__36__0__1	max_left=6	max_left_minus=6	max_left_plus=0	max_min_left=6	max_min_left_minus=6	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=29	max_right_minus=29	max_right_plus=0	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	168		REL606	1122285	-1	REL606	3725720	1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=4	flanking_left=36	flanking_right=36	key=REL606__1122285__0__REL606__3725709__1__11____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=12	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=1
JC	43		REL606	1139226	1	REL606	4021743	1	0	alignment_overlap=8	coverage_minus=13	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1139226__1__REL606__4021735__1__8____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=8	max_min_right_minus=8	max_min_right_plus=0	max_right=8	max_right_minus=8	max_right_plus=0	min_overlap_score=54	pos_hash_score=10	reject=NJ	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=13	total_reads=13
JC	121		REL606	1160554	-1	REL606	4305080	1	-5	alignment_overlap=-5	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1160554__0__REL606__4305080__1__-5__GCGTA__36__36__0__0	max_left=11	max_left_minus=0	max_left_plus=11	max_min_left=11	max_min_left_minus=0	max_min_left_plus=11	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=33	max_right_minus=0	max_right_plus=33	min_overlap_score=7	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=GCGTA
JC	30		REL606	1162203	1	REL606	2775878	-1	-1	alignment_overlap=-1	coverage_minus=13	coverage_plus=18	flanking_left=36	flanking_right=36	key=REL606__1162203__1__REL606__2775878__0__-1__A__36__36__0__0	max_left=14	max_left_minus=14	max_left_plus=14	max_min_left=14	max_min_left_minus=14	max_min_left_plus=14	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=32	max_right_minus=32	max_right_plus=31	min_overlap_score=288	pos_hash_score=19	reject=NJ	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=31	total_reads=31	unique_read_sequence=A
JC	44		REL606	1183983	1	REL606	1550043	1	0	alignment_overlap=5	coverage_minus=0	coverage_plus=12	flanking_left=36	flanking_right=36	key=REL606__1183983__1__REL606__1550038__1__5____36__36__0__0	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=30	max_right_minus=0	max_right_plus=30	min_overlap_score=76	pos_hash_score=9	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=12	total_reads=12
JC	310		REL606	1235496	-1	REL606	3577803	1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1235496__0__REL606__3577802__1__1____36__36__0__0	max_left=16	max_left_minus=0	max_left_plus=16	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=13	max_right_minus=0	max_right_plus=13	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	109		REL606	1267691	-1	REL606	1417509	1	0	alignment_overlap=2	coverage_minus=0	coverage_plus=4	flanking_left=36	flanking_right=36	key=REL606__1267691__0__REL606__1417507__1__2____36__36__0__0	max_left=12	max_left_minus=0	max_left_plus=12	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=0	max_right_plus=28	min_overlap_score=37	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=4
JC	62		REL606	1286705	1	REL606	1802338	1	0	alignment_overlap=7	coverage_minus=0	coverage_plus=10	flanking_left=36	flanking_right=36	key=REL606__1286705__1__REL606__1802331__1__7____36__36__0__0	max_left=9	max_left_minus=0	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=63	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	31		REL606	1297859	-1	REL606	1591863	1	0	alignment_overlap=5	coverage_minus=18	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1297859__0__REL606__1591858__1__5____36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=14	max_min_right_plus=0	max_right=14	max_right_minus=14	max_right_plus=0	min_overlap_score=132	pos_hash_score=10	reject=NJ	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=18	total_reads=18
JC	38		REL606	1334052	1	REL606	2529093	1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=14	flanking_left=36	flanking_right=36	key=REL606__1334052__1__REL606__2529084__1__9____36__36__0__0	max_left=11	max_left_minus=0	max_left_plus=11	max_min_left=11	max_min_left_minus=0	max_min_left_plus=11	max_min_right=10	max_min_right_minus=0	max_min_right_plus=10	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=71	pos_hash_score=8	reject=NJ	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=14	total_reads=14
JC	122		REL606	1384354	1	REL606	3409919	-1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1384354__1__REL606__3409927__0__8____36__36__0__0	max_left=12	max_left_minus=12	max_left_plus=7	max_min_left=12	max_min_left_minus=12	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=21	max_right_minus=16	max_right_plus=21	min_overlap_score=19	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	128		REL606	1436135	1	REL606	2871320	-1	-7	alignment_overlap=-7	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1436135__1__REL606__2871320__0__-7__GTATACG__36__36__0__0	max_left=14	max_left_minus=14	max_left_plus=14	max_min_left=14	max_min_left_minus=0	max_min_left_plus=14	max_min_right=11	max_min_right_minus=11	max_min_right_plus=0	max_right=15	max_right_minus=11	max_right_plus=15	min_overlap_score=25	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=GTATACG
JC	86		REL606	1468049	1	REL606	3842494	-1	0	alignment_overlap=5	coverage_minus=0	coverage_plus=7	flanking_left=36	flanking_right=36	key=REL606__1468049__1__REL606__3842499__0__5____36__36__0__0	max_left=9	max_left_minus=0	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=48	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	89		REL606	1495815	1	REL606	4038529	1	0	alignment_overlap=6	coverage_minus=6	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1495815__1__REL606__4038523__1__6____36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=10	max_min_right_minus=10	max_min_right_plus=0	max_right=10	max_right_minus=10	max_right_plus=0	min_overlap_score=42	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=6	total_reads=6
JC	189		REL606	1514512	-1	REL606	4490084	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1514512__0__REL606__4490085__0__1____36__36__0__0	max_left=3	max_left_minus=0	max_left_plus=3	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=32	max_right_minus=0	max_right_plus=32	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	4		REL606	1544689	1	REL606	2408209	-1	0	alignment_overlap=3	coverage_minus=39	coverage_plus=39	flanking_left=36	flanking_right=36	key=REL606__1544689__1__REL606__2408212__0__3____36__36__1__1	max_left=32	max_left_minus=32	max_left_plus=30	max_min_left=16	max_min_left_minus=15	max_min_left_plus=16	max_min_right=16	max_min_right_minus=16	max_min_right_plus=16	max_right=32	max_right_minus=31	max_right_plus=32	min_overlap_score=650	pos_hash_score=42	side_1_annotate_key=repeat	side_1_overlap=3	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=78	total_reads=112
JC	46		REL606	1579050	1	REL606	3650765	1	0	alignment_overlap=6	coverage_minus=12	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1579050__1__REL606__3650759__1__6____36__36__0__0	max_left=29	max_left_minus=29	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=10	max_min_right_minus=10	max_min_right_plus=0	max_right=10	max_right_minus=10	max_right_plus=0	min_overlap_score=72	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=12	total_reads=12
JC	219		REL606	1620716	-1	REL606	2295243	1	-2	alignment_overlap=-2	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1620716__0__REL606__2295243__1__-2__AT__36__36__0__0	max_left=13	max_left_minus=0	max_left_plus=13	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=16	max_right_minus=0	max_right_plus=16	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=AT
JC	63		REL606	1640450	1	REL606	2212767	1	0	alignment_overlap=7	coverage_minus=0	coverage_plus=10	flanking_left=36	flanking_right=36	key=REL606__1640450__1__REL606__2212760__1__7____36__36__0__0	max_left=9	max_left_minus=0	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=31	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	97		REL606	1654827	-1	REL606	2913440	1	-6	alignment_overlap=-6	coverage_minus=3	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1654827__0__REL606__2913440__1__-6__AGATAA__36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=15	max_min_left=13	max_min_left_minus=13	max_min_left_plus=12	max_min_right=15	max_min_right_minus=15	max_min_right_plus=15	max_right=15	max_right_minus=15	max_right_plus=15	min_overlap_score=67	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5	unique_read_sequence=AGATAA
JC	95		REL606	1676581	-1	REL606	2919990	-1	-4	alignment_overlap=-4	coverage_minus=4	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1676581__0__REL606__2919990__0__-4__GCAA__36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=15	max_min_left=15	max_min_left_minus=15	max_min_left_plus=15	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=17	max_right_plus=17	min_overlap_score=68	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5	unique_read_sequence=GCAA
JC	114		REL606	1711776	1	REL606	2829418	1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=3	flanking_left=36	flanking_right=36	key=REL606__1711776__1__REL606__2829417__1__1____36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=15	max_min_right_minus=0	max_min_right_plus=15	max_right=15	max_right_minus=0	max_right_plus=15	min_overlap_score=43	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=3	total_reads=3
JC	40		REL606	1726531	1	REL606	4393060	1	0	alignment_overlap=8	coverage_minus=13	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1726531__1__REL606__4393052__1__8____36__36__0__0	max_left=27	max_left_minus=27	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=6	max_min_right_plus=0	max_right=6	max_right_minus=6	max_right_plus=0	min_overlap_score=49	pos_hash_score=8	reject=NJ	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=13	total_reads=13
JC	92		REL606	1761800	-1	REL606	2180500	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=5	flanking_left=36	flanking_right=36	key=REL606__1761800__0__REL606__2180509__0__9____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=21	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5
JC	74		REL606	1761802	-1	REL606	1773811	1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=8	flanking_left=36	flanking_right=36	key=REL606__1761802__0__REL606__1773800__1__11____36__36__0__0	max_left=21	max_left_minus=0	max_left_plus=21	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=12	max_min_right_minus=0	max_min_right_plus=12	max_right=21	max_right_minus=0	max_right_plus=21	min_overlap_score=46	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8
JC	72		REL606	1782830	1	REL606	1854411	1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=8	flanking_left=36	flanking_right=36	key=REL606__1782830__1__REL606__1854402__1__9____36__36__0__0	max_left=18	max_left_minus=0	max_left_plus=18	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=2	max_min_right_minus=0	max_min_right_plus=2	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=30	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8
JC	70		REL606	1788944	-1	REL606	4121487	1	0	alignment_overlap=0	coverage_minus=8	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1788944__0__REL606__4121487__1__0____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=14	max_min_right_plus=0	max_right=14	max_right_minus=14	max_right_plus=0	min_overlap_score=112	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8
JC	10		REL606	1821525	1	REL606	3651091	1	0	alignment_overlap=3	coverage_minus=43	coverage_plus=31	flanking_left=36	flanking_right=36	key=REL606__1821523__1__REL606__3651090__1__3____36__36__0__1	max_left=31	max_left_minus=31	max_left_plus=30	max_min_left=16	max_min_left_minus=14	max_min_left_plus=16	max_min_right=16	max_min_right_minus=16	max_min_right_plus=16	max_right=32	max_right_minus=32	max_right_plus=31	min_overlap_score=604	pos_hash_score=41	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=2	side_2_redundant=1	total_non_overlap_reads=74	total_reads=83
JC	264		REL606	1854188	-1	REL606	2483673	-1	0	alignment_overlap=3	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1854188__0__REL606__2483676__0__3____36__36__0__0	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=31	max_right_minus=0	max_right_plus=31	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	131		REL606	1868928	1	REL606	3319923	-1	0	alignment_overlap=5	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__1868928__1__REL606__3319928__0__5____36__36__0__0	max_left=18	max_left_minus=18	max_left_plus=18	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=13	max_min_right_plus=13	max_right=13	max_right_minus=13	max_right_plus=13	min_overlap_score=26	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	53		REL606	1875151	-1	REL606	3677027	-1	0	alignment_overlap=7	coverage_minus=11	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1875151__0__REL606__3677034__0__7____36__36__0__0	max_left=27	max_left_minus=27	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=9	max_right_minus=9	max_right_plus=0	min_overlap_score=61	pos_hash_score=9	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	68		REL606	1906439	-1	REL606	2965702	1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=9	flanking_left=36	flanking_right=36	key=REL606__1906439__0__REL606__2965694__1__8____36__36__0__0	max_left=7	max_left_minus=0	max_left_plus=7	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=26	max_right_minus=0	max_right_plus=26	min_overlap_score=33	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=9	total_reads=9
JC	275		REL606	1922794	1	REL606	1923084	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1922794__1__REL606__1923085__0__1____36__36__0__1	max_left=22	max_left_minus=22	max_left_plus=14	max_min_left=14	max_min_left_minus=0	max_min_left_plus=14	max_min_right=5	max_min_right_minus=5	max_min_right_plus=0	max_right=34	max_right_minus=5	max_right_plus=34	min_overlap_score=20	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=3	total_reads=1
JC	179		REL606	1922988	1	REL606	3298287	1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1922988__1__REL606__3298283__1__4____36__36__0__0	max_left=29	max_left_minus=29	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	251		REL606	1922998	1	REL606	4323611	1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1923000__1__REL606__4323611__1__2____36__36__1__0	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=2	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	58		REL606	1938341	1	REL606	4038529	1	0	alignment_overlap=6	coverage_minus=10	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1938341__1__REL606__4038523__1__6____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=10	max_min_right_minus=10	max_min_right_plus=0	max_right=10	max_right_minus=10	max_right_plus=0	min_overlap_score=80	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	50		REL606	1965852	-1	REL606	3798820	-1	0	alignment_overlap=6	coverage_minus=0	coverage_plus=11	flanking_left=36	flanking_right=36	key=REL606__1965852__0__REL606__3798826__0__6____36__36__0__0	max_left=13	max_left_minus=0	max_left_plus=13	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=28	max_right_minus=0	max_right_plus=28	min_overlap_score=86	pos_hash_score=9	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	141		REL606	1968166	-1	REL606	2462357	-1	0	alignment_overlap=7	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__1968166__0__REL606__2462364__0__7____36__36__0__0	max_left=21	max_left_minus=21	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=9	max_right_minus=9	max_right_plus=0	min_overlap_score=10	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	129		REL606	1979150	1	REL606	4323625	1	0	alignment_overlap=14	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1979150__1__REL606__4323611__1__14____36__36__0__1	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=0	max_min_right_plus=6	max_right=6	max_right_minus=0	max_right_plus=6	min_overlap_score=11	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=14	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=2
JC	115		REL606	1983320	1	REL606	4386612	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__1983320__1__REL606__4386604__1__8____36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=13	max_min_right_minus=13	max_min_right_plus=0	max_right=26	max_right_minus=13	max_right_plus=26	min_overlap_score=24	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=3	total_reads=3
JC	65		REL606	1997487	-1	REL606	3965096	-1	0	alignment_overlap=7	coverage_minus=0	coverage_plus=10	flanking_left=36	flanking_right=36	key=REL606__1997487__0__REL606__3965103__0__7____36__36__0__0	max_left=8	max_left_minus=0	max_left_plus=8	max_min_left=8	max_min_left_minus=0	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=0	max_right_plus=28	min_overlap_score=28	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	71		REL606	2027331	-1	REL606	2584660	-1	-8	alignment_overlap=-8	coverage_minus=4	coverage_plus=4	flanking_left=36	flanking_right=36	key=REL606__2027331__0__REL606__2584660__0__-8__CATGCCGA__36__36__0__0	max_left=15	max_left_minus=14	max_left_plus=15	max_min_left=13	max_min_left_minus=7	max_min_left_plus=13	max_min_right=14	max_min_right_minus=14	max_min_right_plus=14	max_right=14	max_right_minus=14	max_right_plus=14	min_overlap_score=100	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8	unique_read_sequence=CATGCCGA
JC	137		REL606	2056176	1	REL606	2255144	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__2056185__1__REL606__2255144__0__9____36__36__1__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=12	max_min_right_minus=0	max_min_right_plus=12	max_right=13	max_right_minus=0	max_right_plus=13	min_overlap_score=24	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=9	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	56		REL606	2077998	1	REL606	3915329	1	0	alignment_overlap=9	coverage_minus=10	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2077998__1__REL606__3915320__1__9____36__36__0__0	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=6	max_min_right_plus=0	max_right=6	max_right_minus=6	max_right_plus=0	min_overlap_score=32	pos_hash_score=7	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	96		REL606	2158688	-1	REL606	3244238	-1	0	alignment_overlap=9	coverage_minus=5	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2158688__0__REL606__3244247__0__9____36__36__0__0	max_left=17	max_left_minus=17	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=9	max_right_minus=9	max_right_plus=0	min_overlap_score=44	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=5	total_reads=5
JC	84		REL606	2162092	1	REL606	4311039	-1	0	alignment_overlap=12	coverage_minus=0	coverage_plus=7	flanking_left=36	flanking_right=36	key=REL606__2162092__1__REL606__4311051__0__12____36__36__0__0	max_left=8	max_left_minus=0	max_left_plus=8	max_min_left=8	max_min_left_minus=0	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=22	max_right_minus=0	max_right_plus=22	min_overlap_score=23	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=12	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	215		REL606	2183965	1	REL606	3150221	1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2183976__1__REL606__3150221__1__11____36__36__1__0	max_left=21	max_left_minus=21	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=3	max_right_minus=3	max_right_plus=0	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=11	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	300		REL606	2187748	1	REL606	3149472	1	0	alignment_overlap=10	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__2187748__1__REL606__3149462__1__10____36__36__1__1	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=21	max_right_minus=0	max_right_plus=21	min_overlap_score=11	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=10	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	249		REL606	2187770	-1	REL606	4214386	-1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2187770__0__REL606__4214388__0__2____36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=6	max_min_right_minus=6	max_min_right_plus=0	max_right=6	max_right_minus=6	max_right_plus=0	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	292		REL606	2187774	1	REL606	2583282	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2187774__1__REL606__2583282__0__0____36__36__0__0	max_left=33	max_left_minus=33	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=3	max_right_minus=3	max_right_plus=0	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	171		REL606	2187805	-1	REL606	4603894	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2187805__0__REL606__4603902__0__8____36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=0	max_min_right_plus=14	max_right=14	max_right_minus=0	max_right_plus=14	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	170		REL606	2257614	1	REL606	3307169	-1	-1	alignment_overlap=-1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2257614__1__REL606__3307169__0__-1__C__36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=12	max_min_right_minus=12	max_min_right_plus=0	max_right=12	max_right_minus=12	max_right_plus=0	min_overlap_score=12	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=C
JC	305		REL606	2263688	1	REL606	4304649	-1	0	alignment_overlap=3	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2263688__1__REL606__4304652__0__3____36__36__0__1	max_left=2	max_left_minus=0	max_left_plus=2	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	119		REL606	2293890	1	REL606	2293897	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__2293890__1__REL606__2293897__0__0____36__36__0__0	max_left=23	max_left_minus=0	max_left_plus=23	max_min_left=14	max_min_left_minus=0	max_min_left_plus=14	max_min_right=12	max_min_right_minus=0	max_min_right_plus=12	max_right=15	max_right_minus=0	max_right_plus=15	min_overlap_score=26	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	268		REL606	2293982	-1	REL606	4603892	-1	0	alignment_overlap=10	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2293982__0__REL606__4603902__0__10____36__36__0__0	max_left=19	max_left_minus=0	max_left_plus=19	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=0	max_min_right_plus=7	max_right=7	max_right_minus=0	max_right_plus=7	min_overlap_score=7	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	276		REL606	2345104	-1	REL606	3546239	-1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2345104__0__REL606__3546241__0__2____36__36__0__0	max_left=31	max_left_minus=31	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	111		REL606	2353455	-1	REL606	4120994	1	0	alignment_overlap=14	coverage_minus=0	coverage_plus=3	flanking_left=36	flanking_right=36	key=REL606__2353455__0__REL606__4120980__1__14____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=16	max_right_minus=0	max_right_plus=16	min_overlap_score=16	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=14	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=3	total_reads=3
JC	257		REL606	2374550	1	REL606	4304621	1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2374550__1__REL606__4304619__1__2____36__36__0__0	max_left=31	max_left_minus=31	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=2	max_min_right_plus=0	max_right=2	max_right_minus=2	max_right_plus=0	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	306		REL606	2387433	1	REL606	2973689	-1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2387433__1__REL606__2973690__0__1____36__36__0__1	max_left=32	max_left_minus=32	max_left_plus=3	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=31	max_right_minus=1	max_right_plus=31	min_overlap_score=4	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	260		REL606	2410181	-1	REL606	4617960	1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2410181__0__REL606__4617959__1__1____36__36__0__1	max_left=29	max_left_minus=29	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	187		REL606	2445662	-1	REL606	2583282	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2445662__0__REL606__2583282__0__0____36__36__1__0	max_left=32	max_left_minus=32	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=3	max_right_minus=3	max_right_plus=0	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	194		REL606	2445668	-1	REL606	4603739	1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__2445668__0__REL606__4603738__1__1____36__36__0__1	max_left=34	max_left_minus=0	max_left_plus=34	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=1	max_min_right_minus=0	max_min_right_plus=1	max_right=29	max_right_minus=0	max_right_plus=29	min_overlap_score=7	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	216		REL606	2445672	-1	REL606	4074096	1	0	alignment_overlap=10	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2445662__0__REL606__4074096__1__10____36__36__1__0	max_left=22	max_left_minus=0	max_left_plus=22	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=0	max_min_right_plus=3	max_right=3	max_right_minus=0	max_right_plus=3	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=10	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	82		REL606	2462364	-1	REL606	3032163	1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=7	flanking_left=36	flanking_right=36	key=REL606__2462364__0__REL606__3032152__1__11____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=18	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	262		REL606	2488862	1	REL606	2488941	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__2488870__1__REL606__2488941__1__8____36__36__1__0	max_left=25	max_left_minus=24	max_left_plus=25	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=1	max_min_right_plus=2	max_right=2	max_right_minus=1	max_right_plus=2	min_overlap_score=-1	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=8	side_2_redundant=0	total_non_overlap_reads=3	total_reads=1
JC	156		REL606	2488870	1	REL606	2583282	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2488870__1__REL606__2583282__0__0____36__36__1__0	max_left=33	max_left_minus=0	max_left_plus=33	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=0	max_min_right_plus=3	max_right=3	max_right_minus=0	max_right_plus=3	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	78		REL606	2489063	1	REL606	2583281	-1	0	alignment_overlap=3	coverage_minus=3	coverage_plus=36	flanking_left=36	flanking_right=36	key=REL606__2489066__1__REL606__2583281__0__3____36__36__1__0	max_left=32	max_left_minus=32	max_left_plus=24	max_min_left=16	max_min_left_minus=0	max_min_left_plus=16	max_min_right=13	max_min_right_minus=1	max_min_right_plus=13	max_right=32	max_right_minus=1	max_right_plus=32	min_overlap_score=247	pos_hash_score=22	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=3	side_2_redundant=0	total_non_overlap_reads=39	total_reads=8
JC	290		REL606	2489070	1	REL606	2583282	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2489070__1__REL606__2583282__0__0____36__36__1__0	max_left=33	max_left_minus=32	max_left_plus=33	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=4	max_min_right_minus=4	max_min_right_plus=3	max_right=4	max_right_minus=4	max_right_plus=3	min_overlap_score=7	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=1
JC	54		REL606	2509285	1	REL606	4287227	-1	0	alignment_overlap=5	coverage_minus=0	coverage_plus=11	flanking_left=36	flanking_right=36	key=REL606__2509285__1__REL606__4287232__0__5____36__36__0__0	max_left=13	max_left_minus=0	max_left_plus=13	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=0	max_right_plus=28	min_overlap_score=55	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	164		REL606	2538878	-1	REL606	3150232	1	0	alignment_overlap=11	coverage_minus=1	coverage_plus=3	flanking_left=36	flanking_right=36	key=REL606__2538878__0__REL606__3150221__1__11____36__36__1__1	max_left=24	max_left_minus=24	max_left_plus=12	max_min_left=12	max_min_left_minus=0	max_min_left_plus=12	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=20	max_right_minus=1	max_right_plus=20	min_overlap_score=25	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=11	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=4	total_reads=1
JC	77		REL606	2560488	1	REL606	4039097	1	0	alignment_overlap=9	coverage_minus=8	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2560488__1__REL606__4039088__1__9____36__36__0__0	max_left=24	max_left_minus=24	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=5	max_min_right_minus=5	max_min_right_plus=0	max_right=5	max_right_minus=5	max_right_plus=0	min_overlap_score=32	pos_hash_score=8	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8
JC	218		REL606	2569059	-1	REL606	3362517	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2569059__0__REL606__3362517__0__0____36__36__0__0	max_left=27	max_left_minus=27	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=9	max_right_minus=9	max_right_plus=0	min_overlap_score=9	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	178		REL606	2575888	-1	REL606	4574392	1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2575888__0__REL606__4574392__1__0____36__36__0__0	max_left=4	max_left_minus=0	max_left_plus=4	max_min_left=4	max_min_left_minus=0	max_min_left_plus=4	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=32	max_right_minus=0	max_right_plus=32	min_overlap_score=4	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	169		REL606	2583010	1	REL606	3150232	1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2583010__1__REL606__3150221__1__11____36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=11	max_min_right_minus=0	max_min_right_plus=11	max_right=11	max_right_minus=0	max_right_plus=11	min_overlap_score=11	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	12		REL606	2583281	-1	REL606	3164070	1	0	alignment_overlap=4	coverage_minus=34	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2583281__0__REL606__3164066__1__4____36__36__0__1	max_left=31	max_left_minus=31	max_left_plus=18	max_min_left=12	max_min_left_minus=12	max_min_left_plus=0	max_min_right=16	max_min_right_minus=16	max_min_right_plus=14	max_right=23	max_right_minus=23	max_right_plus=14	min_overlap_score=228	pos_hash_score=20	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=35	total_reads=82
JC	299		REL606	2583281	-1	REL606	3202853	-1	0	alignment_overlap=2	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2583281__0__REL606__3202855__0__2____36__36__0__1	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=1	max_min_left_minus=1	max_min_left_plus=0	max_min_right=2	max_min_right_minus=2	max_min_right_plus=0	max_right=33	max_right_minus=33	max_right_plus=0	min_overlap_score=3	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	208		REL606	2583282	-1	REL606	2968472	-1	0	alignment_overlap=3	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2583282__0__REL606__2968475__0__3____36__36__0__0	max_left=23	max_left_minus=23	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=4	max_min_right_minus=4	max_min_right_plus=0	max_right=4	max_right_minus=4	max_right_plus=0	min_overlap_score=4	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	147		REL606	2585160	1	REL606	3361890	-1	0	alignment_overlap=14	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2585160__1__REL606__3361904__0__14____36__36__0__0	max_left=8	max_left_minus=8	max_left_plus=7	max_min_left=8	max_min_left_minus=8	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=15	max_right_minus=14	max_right_plus=15	min_overlap_score=15	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=14	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	103		REL606	2594284	1	REL606	3599631	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=4	flanking_left=36	flanking_right=36	key=REL606__2594284__1__REL606__3599639__0__8____36__36__0__0	max_left=13	max_left_minus=0	max_left_plus=13	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=0	max_min_right_plus=9	max_right=9	max_right_minus=0	max_right_plus=9	min_overlap_score=32	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=4
JC	209		REL606	2625395	-1	REL606	4009909	1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2625395__0__REL606__4009907__1__2____36__36__0__0	max_left=16	max_left_minus=16	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=13	max_min_right_plus=0	max_right=13	max_right_minus=13	max_right_plus=0	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	106		REL606	2647432	1	REL606	2939047	-1	0	alignment_overlap=5	coverage_minus=0	coverage_plus=4	flanking_left=36	flanking_right=36	key=REL606__2647432__1__REL606__2939052__0__5____36__36__0__0	max_left=9	max_left_minus=0	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=30	max_right_minus=0	max_right_plus=30	min_overlap_score=23	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=4
JC	152		REL606	2662385	-1	REL606	2662526	-1	0	alignment_overlap=5	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2662385__0__REL606__2662531__0__5____36__36__0__0	max_left=9	max_left_minus=9	max_left_plus=0	max_min_left=9	max_min_left_minus=9	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=23	max_right_minus=23	max_right_plus=0	min_overlap_score=17	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	238		REL606	2664356	-1	REL606	3483988	-1	0	alignment_overlap=0	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2664356__0__REL606__3483988__0__0____36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=0	max_min_left=15	max_min_left_minus=15	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=19	max_right_minus=19	max_right_plus=0	min_overlap_score=15	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	123		REL606	2725131	-1	REL606	3423361	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__2725131__0__REL606__3423361__0__0____36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=14	max_min_left_minus=0	max_min_left_plus=14	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=20	max_right_minus=0	max_right_plus=20	min_overlap_score=28	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	280		REL606	2738469	1	REL606	3680561	-1	0	alignment_overlap=9	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2738469__1__REL606__3680570__0__9____36__36__0__0	max_left=20	max_left_minus=20	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	85		REL606	2759586	-1	REL606	4546220	-1	0	alignment_overlap=10	coverage_minus=7	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2759586__0__REL606__4546230__0__10____36__36__0__0	max_left=24	max_left_minus=24	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=7	max_min_right_plus=0	max_right=7	max_right_minus=7	max_right_plus=0	min_overlap_score=32	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	132		REL606	2771036	-1	REL606	2771184	-1	0	alignment_overlap=5	coverage_minus=2	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2771036__0__REL606__2771189__0__5____36__36__0__0	max_left=7	max_left_minus=7	max_left_plus=0	max_min_left=7	max_min_left_minus=7	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=25	max_right_minus=25	max_right_plus=0	min_overlap_score=13	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	267		REL606	2861256	1	REL606	4000720	1	-2	alignment_overlap=-2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2861256__1__REL606__4000720__1__-2__AC__36__36__0__0	max_left=31	max_left_minus=31	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=3	max_min_right_minus=3	max_min_right_plus=0	max_right=3	max_right_minus=3	max_right_plus=0	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=AC
JC	145		REL606	2885003	1	REL606	4392071	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__2885003__1__REL606__4392072__0__1____36__36__0__0	max_left=14	max_left_minus=0	max_left_plus=14	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=17	max_right_minus=0	max_right_plus=17	min_overlap_score=26	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	148		REL606	2961910	-1	REL606	2961931	-1	0	alignment_overlap=3	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__2961910__0__REL606__2961934__0__3____36__36__0__0	max_left=24	max_left_minus=24	max_left_plus=13	max_min_left=13	max_min_left_minus=0	max_min_left_plus=13	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=20	max_right_minus=9	max_right_plus=20	min_overlap_score=22	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=3	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	274		REL606	2968470	-1	REL606	3041377	1	0	alignment_overlap=6	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2968470__0__REL606__3041371__1__6____36__36__0__0	max_left=24	max_left_minus=24	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=6	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	90		REL606	2969486	-1	REL606	3035289	-1	0	alignment_overlap=10	coverage_minus=6	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__2969486__0__REL606__3035299__0__10____36__36__0__0	max_left=21	max_left_minus=21	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=5	max_min_right_minus=5	max_min_right_plus=0	max_right=5	max_right_minus=5	max_right_plus=0	min_overlap_score=27	pos_hash_score=5	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=6	total_reads=6
JC	104		REL606	3006360	-1	REL606	4021203	-1	0	alignment_overlap=0	coverage_minus=3	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3006360__0__REL606__4021203__0__0____36__36__0__0	max_left=33	max_left_minus=33	max_left_plus=16	max_min_left=16	max_min_left_minus=0	max_min_left_plus=16	max_min_right=15	max_min_right_minus=15	max_min_right_plus=0	max_right=20	max_right_minus=15	max_right_plus=20	min_overlap_score=37	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=4
JC	136		REL606	3014685	-1	REL606	3609802	-1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3014685__0__REL606__3609810__0__8____36__36__0__0	max_left=21	max_left_minus=21	max_left_plus=14	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=7	max_min_right_plus=14	max_right=14	max_right_minus=7	max_right_plus=14	min_overlap_score=21	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	19		REL606	3015774	-1	REL606	3652533	-1	0	alignment_overlap=2	coverage_minus=27	coverage_plus=22	flanking_left=36	flanking_right=36	key=REL606__3015774__0__REL606__3652535__0__2____36__36__0__1	max_left=33	max_left_minus=33	max_left_plus=33	max_min_left=16	max_min_left_minus=16	max_min_left_plus=13	max_min_right=17	max_min_right_minus=17	max_min_right_plus=17	max_right=33	max_right_minus=31	max_right_plus=33	min_overlap_score=419	pos_hash_score=32	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=49	total_reads=58
JC	277		REL606	3034155	-1	REL606	4209492	1	-1	alignment_overlap=-1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3034155__0__REL606__4209492__1__-1__C__36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=0	max_min_right_plus=14	max_right=14	max_right_minus=0	max_right_plus=14	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=C
JC	188		REL606	3073769	-1	REL606	4228309	1	0	alignment_overlap=15	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3073769__0__REL606__4228294__1__15____36__36__0__1	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=14	max_right_minus=0	max_right_plus=14	min_overlap_score=6	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=15	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	220		REL606	3134821	1	REL606	3944740	1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3134821__1__REL606__3944739__1__1____36__36__0__0	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=13	max_right_minus=0	max_right_plus=13	min_overlap_score=13	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	55		REL606	3139344	1	REL606	4281474	1	0	alignment_overlap=8	coverage_minus=11	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3139344__1__REL606__4281466__1__8____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=8	max_min_right_minus=8	max_min_right_plus=0	max_right=8	max_right_minus=8	max_right_plus=0	min_overlap_score=42	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	112		REL606	3150221	1	REL606	4467438	-1	0	alignment_overlap=11	coverage_minus=3	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3150221__1__REL606__4467449__0__11____36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=2	max_min_left=11	max_min_left_minus=11	max_min_left_plus=2	max_min_right=7	max_min_right_minus=7	max_min_right_plus=0	max_right=16	max_right_minus=16	max_right_plus=15	min_overlap_score=23	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=3
JC	167		REL606	3150221	1	REL606	4603814	-1	0	alignment_overlap=11	coverage_minus=3	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3150221__1__REL606__4603825__0__11____36__36__0__0	max_left=20	max_left_minus=20	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=12	max_min_right_minus=12	max_min_right_plus=0	max_right=19	max_right_minus=12	max_right_plus=19	min_overlap_score=25	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=4	total_reads=1
JC	243		REL606	3150221	1	REL606	3202841	-1	0	alignment_overlap=11	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3150221__1__REL606__3202852__0__11____36__36__0__1	max_left=3	max_left_minus=0	max_left_plus=3	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=17	max_right_minus=0	max_right_plus=17	min_overlap_score=3	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=11	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	91		REL606	3156810	-1	REL606	3360228	-1	0	alignment_overlap=10	coverage_minus=6	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3156810__0__REL606__3360238__0__10____36__36__0__0	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=7	max_min_right_plus=0	max_right=7	max_right_minus=7	max_right_plus=0	min_overlap_score=17	pos_hash_score=4	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=6	total_reads=6
JC	143		REL606	3176143	-1	REL606	4203071	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__3176143__0__REL606__4203080__0__9____36__36__0__0	max_left=6	max_left_minus=0	max_left_plus=6	max_min_left=6	max_min_left_minus=0	max_min_left_plus=6	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=20	max_right_minus=0	max_right_plus=20	min_overlap_score=11	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	61		REL606	3183662	1	REL606	3390932	1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=10	flanking_left=36	flanking_right=36	key=REL606__3183662__1__REL606__3390924__1__8____36__36__0__0	max_left=8	max_left_minus=0	max_left_plus=8	max_min_left=8	max_min_left_minus=0	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=44	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=10	total_reads=10
JC	191		REL606	3217951	-1	REL606	3488882	1	-3	alignment_overlap=-3	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3217951__0__REL606__3488882__1__-3__TGC__36__36__0__0	max_left=18	max_left_minus=18	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=15	max_min_right_minus=15	max_min_right_plus=0	max_right=15	max_right_minus=15	max_right_plus=0	min_overlap_score=15	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=TGC
JC	113		REL606	3232229	1	REL606	4603534	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=3	flanking_left=36	flanking_right=36	key=REL606__3232229__1__REL606__4603534__0__0____36__36__0__0	max_left=30	max_left_minus=0	max_left_plus=30	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=6	max_min_right_minus=0	max_min_right_plus=6	max_right=29	max_right_minus=0	max_right_plus=29	min_overlap_score=15	pos_hash_score=3	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=3	total_reads=3
JC	15		REL606	3289961	-1	REL606	3289978	1	0	alignment_overlap=0	coverage_minus=38	coverage_plus=35	flanking_left=36	flanking_right=36	key=REL606__3289961__0__REL606__3289978__1__0____36__36__0__0	max_left=35	max_left_minus=32	max_left_plus=35	max_min_left=17	max_min_left_minus=17	max_min_left_plus=16	max_min_right=18	max_min_right_minus=18	max_min_right_plus=18	max_right=35	max_right_minus=35	max_right_plus=34	min_overlap_score=719	pos_hash_score=44	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=73	total_reads=73
JC	134		REL606	3296323	1	REL606	3296361	-1	0	alignment_overlap=2	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__3296323__1__REL606__3296363__0__2____36__36__0__0	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=32	max_right_minus=0	max_right_plus=32	min_overlap_score=2	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	239		REL606	3298283	1	REL606	3685718	-1	0	alignment_overlap=0	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3298283__1__REL606__3685718__0__0____36__36__0__1	max_left=8	max_left_minus=0	max_left_plus=8	max_min_left=8	max_min_left_minus=0	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=28	max_right_minus=0	max_right_plus=28	min_overlap_score=8	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	41		REL606	3309957	-1	REL606	3605158	-1	0	alignment_overlap=9	coverage_minus=0	coverage_plus=13	flanking_left=36	flanking_right=36	key=REL606__3309957__0__REL606__3605167__0__9____36__36__0__0	max_left=7	max_left_minus=0	max_left_plus=7	max_min_left=7	max_min_left_minus=0	max_min_left_plus=7	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=21	max_right_minus=0	max_right_plus=21	min_overlap_score=85	pos_hash_score=8	reject=NJ	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=13	total_reads=13
JC	127		REL606	3320088	1	REL606	3320268	-1	-1	alignment_overlap=-1	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3320088__1__REL606__3320268__0__-1__C__36__36__1__0	max_left=31	max_left_minus=31	max_left_plus=4	max_min_left=4	max_min_left_minus=0	max_min_left_plus=4	max_min_right=4	max_min_right_minus=4	max_min_right_plus=0	max_right=31	max_right_minus=4	max_right_plus=31	min_overlap_score=8	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2	unique_read_sequence=C
JC	33		REL606	3336611	-1	REL606	3650892	-1	0	alignment_overlap=7	coverage_minus=16	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3336611__0__REL606__3650899__0__7____36__36__0__0	max_left=28	max_left_minus=28	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=9	max_min_right_minus=9	max_min_right_plus=0	max_right=9	max_right_minus=9	max_right_plus=0	min_overlap_score=41	pos_hash_score=10	reject=NJ	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=16	total_reads=16
JC	204		REL606	3362319	-1	REL606	4500422	1	-6	alignment_overlap=-6	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3362319__0__REL606__4500422__1__-6__CATATG__36__36__0__0	max_left=11	max_left_minus=11	max_left_plus=0	max_min_left=11	max_min_left_minus=11	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=16	max_right_minus=16	max_right_plus=0	min_overlap_score=11	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=CATATG
JC	60		REL606	3367495	1	REL606	3725714	1	0	alignment_overlap=5	coverage_minus=0	coverage_plus=13	flanking_left=36	flanking_right=36	key=REL606__3367495__1__REL606__3725709__1__5____36__36__0__0	max_left=10	max_left_minus=0	max_left_plus=10	max_min_left=10	max_min_left_minus=0	max_min_left_plus=10	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=30	max_right_minus=0	max_right_plus=30	min_overlap_score=82	pos_hash_score=12	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=13	total_reads=10
JC	237		REL606	3390948	1	REL606	4373194	-1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__3390948__1__REL606__4373195__0__1____36__36__0__0	max_left=2	max_left_minus=0	max_left_plus=2	max_min_left=2	max_min_left_minus=0	max_min_left_plus=2	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=33	max_right_minus=0	max_right_plus=33	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=1	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	36		REL606	3410873	-1	REL606	3439868	-1	0	alignment_overlap=10	coverage_minus=0	coverage_plus=14	flanking_left=36	flanking_right=36	key=REL606__3410873__0__REL606__3439878__0__10____36__36__0__0	max_left=9	max_left_minus=0	max_left_plus=9	max_min_left=9	max_min_left_minus=0	max_min_left_plus=9	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=24	max_right_minus=0	max_right_plus=24	min_overlap_score=50	pos_hash_score=8	reject=NJ	side_1_annotate_key=gene	side_1_overlap=10	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=14	total_reads=14
JC	73		REL606	3546635	1	REL606	4221716	1	0	alignment_overlap=0	coverage_minus=8	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3546635__1__REL606__4221716__1__0____36__36__0__0	max_left=31	max_left_minus=31	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=7	max_min_right_plus=0	max_right=7	max_right_minus=7	max_right_plus=0	min_overlap_score=36	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=8	total_reads=8
JC	173		REL606	3582609	-1	REL606	4478907	-1	-2	alignment_overlap=-2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3582609__0__REL606__4478907__0__-2__GC__36__36__0__0	max_left=15	max_left_minus=15	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=14	max_min_right_minus=14	max_min_right_plus=0	max_right=14	max_right_minus=14	max_right_plus=0	min_overlap_score=14	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=0	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1	unique_read_sequence=GC
JC	162		REL606	3671475	1	REL606	4005920	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3671483__1__REL606__4005920__1__8____36__36__1__0	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=2	max_min_right_plus=0	max_right=2	max_right_minus=2	max_right_plus=0	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=8	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	151		REL606	3708994	1	REL606	4603894	-1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__3708994__1__REL606__4603902__0__8____36__36__0__0	max_left=25	max_left_minus=0	max_left_plus=25	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=5	max_min_right_minus=0	max_min_right_plus=5	max_right=5	max_right_minus=0	max_right_plus=5	min_overlap_score=8	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	48		REL606	3722144	1	REL606	4091236	-1	0	alignment_overlap=9	coverage_minus=11	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__3722144__1__REL606__4091245__0__9____36__36__0__0	max_left=26	max_left_minus=26	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=7	max_min_right_plus=0	max_right=7	max_right_minus=7	max_right_plus=0	min_overlap_score=42	pos_hash_score=10	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=9	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	26		REL606	3894996	-1	REL606	3901931	1	0	alignment_overlap=3	coverage_minus=21	coverage_plus=21	flanking_left=36	flanking_right=36	key=REL606__3894997__0__REL606__3901929__1__3____36__36__1__0	max_left=32	max_left_minus=31	max_left_plus=32	max_min_left=16	max_min_left_minus=16	max_min_left_plus=15	max_min_right=16	max_min_right_minus=15	max_min_right_plus=16	max_right=32	max_right_minus=32	max_right_plus=31	min_overlap_score=335	pos_hash_score=33	side_1_annotate_key=repeat	side_1_overlap=2	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=1	side_2_redundant=0	total_non_overlap_reads=42	total_reads=49
JC	139		REL606	4005783	1	REL606	4005972	-1	0	alignment_overlap=5	coverage_minus=0	coverage_plus=2	flanking_left=36	flanking_right=36	key=REL606__4005783__1__REL606__4005977__0__5____36__36__0__1	max_left=15	max_left_minus=0	max_left_plus=15	max_min_left=3	max_min_left_minus=0	max_min_left_plus=3	max_min_right=13	max_min_right_minus=0	max_min_right_plus=13	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=16	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=2
JC	83		REL606	4024020	1	REL606	4138914	1	0	alignment_overlap=7	coverage_minus=6	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4024020__1__REL606__4138907__1__7____36__36__0__0	max_left=27	max_left_minus=27	max_left_plus=26	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=7	max_min_right_minus=7	max_min_right_plus=1	max_right=7	max_right_minus=7	max_right_plus=1	min_overlap_score=34	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=7	total_reads=7
JC	205		REL606	4055934	1	REL606	4369171	-1	0	alignment_overlap=2	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__4055934__1__REL606__4369173__0__2____36__36__0__0	max_left=12	max_left_minus=12	max_left_plus=0	max_min_left=12	max_min_left_minus=12	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=21	max_right_minus=21	max_right_plus=0	min_overlap_score=12	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=2	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	289		REL606	4074108	-1	REL606	4305060	1	0	alignment_overlap=4	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__4074108__0__REL606__4305056__1__4____36__36__0__0	max_left=30	max_left_minus=30	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	214		REL606	4083028	-1	REL606	4304661	1	0	alignment_overlap=1	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4083028__0__REL606__4304660__1__1____36__36__1__1	max_left=27	max_left_minus=27	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=34	max_right_minus=1	max_right_plus=34	min_overlap_score=2	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=1	side_1_redundant=1	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=2	total_reads=1
JC	206		REL606	4090198	-1	REL606	4419560	-1	0	alignment_overlap=5	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__4090198__0__REL606__4419565__0__5____36__36__0__1	max_left=2	max_left_minus=2	max_left_plus=0	max_min_left=2	max_min_left_minus=2	max_min_left_plus=0	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=29	max_right_minus=29	max_right_plus=0	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=5	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	49		REL606	4202516	1	REL606	4582890	1	0	alignment_overlap=7	coverage_minus=0	coverage_plus=11	flanking_left=36	flanking_right=36	key=REL606__4202516__1__REL606__4582883__1__7____36__36__0__0	max_left=8	max_left_minus=0	max_left_plus=8	max_min_left=8	max_min_left_minus=0	max_min_left_plus=8	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=27	max_right_minus=0	max_right_plus=27	min_overlap_score=45	pos_hash_score=6	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=7	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=11	total_reads=11
JC	135		REL606	4285030	1	REL606	4447010	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4285030__1__REL606__4447002__1__8____36__36__0__0	max_left=18	max_left_minus=18	max_left_plus=18	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=8	max_min_right_minus=8	max_min_right_plus=8	max_right=8	max_right_minus=8	max_right_plus=8	min_overlap_score=16	pos_hash_score=2	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=2	total_reads=2
JC	259		REL606	4419506	1	REL606	4419546	1	0	alignment_overlap=8	coverage_minus=1	coverage_plus=0	flanking_left=36	flanking_right=36	key=REL606__4419506__1__REL606__4419538__1__8____36__36__0__1	max_left=25	max_left_minus=25	max_left_plus=0	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=1	max_min_right_minus=1	max_min_right_plus=0	max_right=1	max_right_minus=1	max_right_plus=0	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=repeat	side_2_overlap=0	side_2_redundant=1	total_non_overlap_reads=1	total_reads=1
JC	254		REL606	4453688	-1	REL606	4453719	-1	0	alignment_overlap=4	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4453688__0__REL606__4453723__0__4____36__36__0__0	max_left=30	max_left_minus=0	max_left_plus=30	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=0	max_min_right_plus=2	max_right=2	max_right_minus=0	max_right_plus=2	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=4	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	193		REL606	4467512	1	REL606	4530675	1	0	alignment_overlap=1	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4467513__1__REL606__4530675__1__1____36__36__1__0	max_left=30	max_left_minus=0	max_left_plus=30	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=5	max_min_right_minus=0	max_min_right_plus=5	max_right=5	max_right_minus=0	max_right_plus=5	min_overlap_score=5	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=1	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	256		REL606	4471784	-1	REL606	4616970	-1	0	alignment_overlap=16	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4471768__0__REL606__4616970__0__16____36__36__1__0	max_left=18	max_left_minus=0	max_left_plus=18	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=2	max_min_right_minus=0	max_min_right_plus=2	max_right=2	max_right_minus=0	max_right_plus=2	min_overlap_score=2	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=repeat	side_1_overlap=0	side_1_redundant=1	side_2_annotate_key=gene	side_2_overlap=16	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	252		REL606	4595821	1	REL606	4603801	1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4595821__1__REL606__4603793__1__8____36__36__0__0	max_left=1	max_left_minus=0	max_left_plus=1	max_min_left=1	max_min_left_minus=0	max_min_left_plus=1	max_min_right=0	max_min_right_minus=0	max_min_right_plus=0	max_right=25	max_right_minus=0	max_right_plus=25	min_overlap_score=1	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
JC	266		REL606	4603902	-1	REL606	4616916	1	0	alignment_overlap=8	coverage_minus=0	coverage_plus=1	flanking_left=36	flanking_right=36	key=REL606__4603902__0__REL606__4616908__1__8____36__36__0__0	max_left=17	max_left_minus=0	max_left_plus=17	max_min_left=0	max_min_left_minus=0	max_min_left_plus=0	max_min_right=11	max_min_right_minus=0	max_min_right_plus=11	max_right=11	max_right_minus=0	max_right_plus=11	min_overlap_score=11	pos_hash_score=1	reject=NJ,COV	side_1_annotate_key=gene	side_1_overlap=8	side_1_redundant=0	side_2_annotate_key=gene	side_2_overlap=0	side_2_redundant=0	total_non_overlap_reads=1	total_reads=1
UN	313		REL606	15415	16696
UN	315		REL606	23316	24027
UN	321		REL606	69440	69456
UN	322		REL606	69524	69571
UN	340		REL606	226331	226413
UN	341		REL606	226485	226497
UN	342		REL606	226560	227025
UN	343		REL606	227091	228499
UN	344		REL606	228566	231898
UN	345		REL606	231901	231901
UN	347		REL606	239881	239902
UN	348		REL606	239904	239905
UN	349		REL606	241286	241993
UN	350		REL606	241995	241997
UN	351		REL606	242725	242850
UN	352		REL606	242854	242854
UN	354		REL606	243209	243225
UN	355		REL606	243297	243454
UN	356		REL606	243597	243610
UN	357		REL606	243708	243714
UN	359		REL606	262817	263527
UN	364		REL606	312429	312551
UN	365		REL606	312668	312689
UN	368		REL606	322399	322448
UN	369		REL606	322450	322450
UN	370		REL606	322494	322540
UN	371		REL606	324402	324402
UN	373		REL606	330060	330097
UN	374		REL606	330262	330299
UN	381		REL606	353290	354001
UN	388		REL606	376779	377486
UN	403		REL606	429531	430815
UN	413		REL606	480770	480964
UN	422		REL606	495458	498294
UN	423		REL606	498353	498853
UN	432		REL606	545916	545933
UN	433		REL606	545938	545938
UN	448		REL606	546958	555624
UN	449		REL606	555627	555627
UN	450		REL606	555651	555931
UN	452		REL606	555996	555996
UN	453		REL606	557147	557168
UN	454		REL606	557303	557313
UN	455		REL606	557758	557818
UN	456		REL606	557885	557947
UN	457		REL606	558305	558362
UN	459		REL606	568952	569000
UN	460		REL606	569003	569003
UN	461		REL606	569006	569008
UN	462		REL606	569011	569012
UN	463		REL606	569028	569028
UN	464		REL606	569030	569030
UN	465		REL606	569032	569041
UN	466		REL606	569106	569133
UN	467		REL606	569198	569341
UN	468		REL606	569524	569542
UN	469		REL606	569691	569701
UN	470		REL606	569703	569703
UN	471		REL606	569763	569769
UN	472		REL606	569830	569831
UN	473		REL606	569833	569847
UN	475		REL606	569912	570045
UN	476		REL606	572305	572556
UN	477		REL606	572558	572558
UN	478		REL606	572725	572750
UN	479		REL606	572810	572992
UN	481		REL606	573052	573140
UN	482		REL606	573180	573467
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